prot_H-canaliculatus_F_contig1040.417.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1040.417.1
Unique Nameprot_H-canaliculatus_F_contig1040.417.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length564
Homology
BLAST of mRNA_H-canaliculatus_F_contig1040.417.1 vs. uniprot
Match: A0A6H5KZ19_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ19_9PHAE)

HSP 1 Score: 778 bits (2010), Expect = 2.130e-278
Identity = 390/570 (68.42%), Postives = 458/570 (80.35%), Query Frame = 0
Query:    1 MESSPASEEPVANDEAWSCPICFMWFDMPVAPPCQHSFCAGCLKSVVRAAATRQRRNGNSQPLRPACPLCRETFTPEVVQPSAKIFEEMLRATVKCRNGGDCVAQFCPLRWKKHQQEECPSAKVQCMHNAVGCAWKGPRRDLTSHVECCAYEKIKGLVPRVSASLKQMHTQVHHLEARIMAQNAAAANTRAMLAHQRQPGHVFPAVYALLWRPTDWRRYSCPSPNG-VLSNVTLICLAPIVFLALWGAGMFGGGDGLRASDRVVCFGGVSVMGFVAILEYNNGAPWH------ILRGVAVGDLLLQFTARLVVYCTIRALPTWKRLPALLSLLAPLFYPTIVQAVHRLQVQVKNAHNQAQRAHAQPPLPPVEPLVSSAVKVHGAVINGVVRGSCMLVCGREATLVGEGLAKLVVFFSCAVLGPEKQDAFCDHVWVAMSTGIALDDKDRLKERHDMIFKEMKAPLPSTTGRKARGFTATACVCLFAWVVSCFRESLEMIGYSRLLLSILDTAHFRLELHIGRLVMGSLQQTRTDRSTDPGRTRANYLLISRIFFFWVVVGSIFFILLILTS 563
            +E +PA E   A+ +AWSCP+CFMWFDMPV PPCQH+FCAGCLKSVVRAAA RQRR+GN+ P      LCRE FTPEVVQPSA+IFEEML+ATV CRNG DC AQFCPLRWKKHQ EECPSA VQCMH+ VGC W+G RRDL+ HVE CAYEKIKGL+PRVSASLKQ+HTQVH LEAR+MAQNAA ANTRA+LAHQRQ G VFPAVYALLWRP +WR Y  P P G VLSNVTLICLAPI+FLAL GAG+FGGG GL   +R VC  GV+++GFVA+LE++N +P+H      +L+G+A+G+ LL+ TAR +VY  ++ LP WKR PALL LLAPLFYPT+VQAVHR +VQVKNAHNQAQRA AQPPLPPVEP+   AVK HG V+NGVVRG+ ML+      LVGE LAKL VF   A LGPEK DAF +HVW+ MS+GIALDDK RLK+RHD IF++++ PLP+ T R  R   A  CVCLFA +V+ FR+ L+M+GYSRLLLS+LD+AHFR ELH+GR+VMGSLQQTRT++  +  RTRA  LL SR+   WVVVGS FF+L +LTS
Sbjct:   13 VEEAPAEESGDAHGDAWSCPVCFMWFDMPVFPPCQHTFCAGCLKSVVRAAAHRQRRSGNTGPXXXXXXLCREPFTPEVVQPSARIFEEMLKATVTCRNG-DCAAQFCPLRWKKHQ-EECPSAVVQCMHHLVGCVWEGARRDLSLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLAHQRQAGSVFPAVYALLWRPPNWRLYQSPRPGGGVLSNVTLICLAPILFLALCGAGVFGGGGGLVVEERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKGLAIGEFLLEGTARSMVYFALKGLPDWKRTPALLFLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQPPLPPVEPV---AVKTHGTVVNGVVRGTTMLLMNPVPALVGEVLAKLGVFVVSAALGPEKLDAFLEHVWLVMSSGIALDDKARLKKRHDSIFRDLRTPLPNMTDRTTRRLIAAVCVCLFAIIVAFFRDILQMVGYSRLLLSVLDSAHFRWELHVGRVVMGSLQQTRTNQDPNFARTRARDLLRSRLLLLWVVVGSSFFLLFMLTS 577          
BLAST of mRNA_H-canaliculatus_F_contig1040.417.1 vs. uniprot
Match: A0A7S3Y988_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y988_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 3.190e-16
Identity = 44/87 (50.57%), Postives = 51/87 (58.62%), Query Frame = 0
Query:   17 WSCPICFMWFDMPVAPPCQHSFCAGCLKSVVRAAA-TRQRRNGNSQPLR--PACPLCRETFTPEVVQPSAKIFEEMLRATVKCRNGG 100
            W CPIC  W   PVAPPC H+ CAGCL+ VVR A     RR G   P    PACPLCR  F P  V+P   ++ +MLRA V+C   G
Sbjct:  194 WHCPICLAWLTAPVAPPCGHTCCAGCLQKVVRQAVFPAPRRPGERPPSAQDPACPLCRAKFKPADVRPERALYAQMLRARVRCPQAG 280          
BLAST of mRNA_H-canaliculatus_F_contig1040.417.1 vs. uniprot
Match: UPI001425A99E (ligand of Numb protein X 2-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425A99E)

HSP 1 Score: 71.6 bits (174), Expect = 1.940e-9
Identity = 47/148 (31.76%), Postives = 66/148 (44.59%), Query Frame = 0
Query:   12 ANDEAWSCPICFMWFDMPVAPPCQHSFCAGCLKSVVRAAATRQRRNGNSQPLRPACPLCRETFTPEVVQPSAKIFEEML-RATVKCRNGGDCVAQFCPLRWKKHQQEECPSAKVQCMHNAVGCAWKGPRRDLTSHVECCAYEKIKGLV 158
            A DE  +C IC      P    C H++CA C++SV+R    RQ            CP+ R   T +  +PS+ I + ML +  V C N   C         + H    C      C+H A GC ++G R  L SH+  C + K KG+V
Sbjct:   36 AVDEDLTCHICLQPLVNPTDTTCGHTYCAKCIRSVLRVH--RQ------------CPVDRSPLTAQDCRPSSLIIKRMLDKLPVVCPNTTYCDDAMQRSDLEAHLANRCKGNMSHCIHAAHGCTFRGSRTALESHIRECPHAKQKGVV 169          
BLAST of mRNA_H-canaliculatus_F_contig1040.417.1 vs. uniprot
Match: W5K6E2_ASTMX (Uncharacterized protein n=3 Tax=Astyanax mexicanus TaxID=7994 RepID=W5K6E2_ASTMX)

HSP 1 Score: 64.7 bits (156), Expect = 2.780e-7
Identity = 48/167 (28.74%), Postives = 69/167 (41.32%), Query Frame = 0
Query:    7 SEEPVANDEAWSCPICFMWFDMPVAPPCQHSFCAGCLKSVVRAAATRQRRNGNSQPLRPACPLCRETFTPEVVQPSAKIFEEMLRATVKCRNGGDCVAQFCPLRWKKHQQEECPSAKVQCMHNAVGCAWKGPRRDLTSHVECCAYEKIKGLVPRVSASLKQMHTQVH 173
            +E  V + +++SCPIC      PVA PC HSFC GC+K             G+ Q    +CP CR TFTP  V     I  E+     K R      A   P      + + C   K   + + + C        +  H E  AY+K K  +   S +L++    +H
Sbjct:    2 AEAAVKSIDSFSCPICLDLLKDPVAIPCGHSFCLGCIKDCWA---------GDDQRKVYSCPQCRHTFTPRPVLNKNTILAELSEGLRKTRLQAAPPAADSPAGSGGVECDVCTGTKHTAVKSCLACLLSFCEAHIQPHYEIPAYKKHK--LVEASMNLQEKICSLH 157          
BLAST of mRNA_H-canaliculatus_F_contig1040.417.1 vs. uniprot
Match: UPI0018A791CF (LOW QUALITY PROTEIN: cysteine and histidine-rich protein 1 homolog n=1 Tax=Penaeus monodon TaxID=6687 RepID=UPI0018A791CF)

HSP 1 Score: 60.5 bits (145), Expect = 1.680e-6
Identity = 36/145 (24.83%), Postives = 60/145 (41.38%), Query Frame = 0
Query:   22 CFMWFDMPVAPPCQ----HSFCAGCLKSVVRAAATRQRRNGNSQPLRPACPLCRETFTPEVVQPSAKIFEEMLRATVKCRNGGDCVAQFCPLRWKK-----HQQEECPSAKVQCMHNAVGCAWKGPRRDLTSHVECCAYEKIKGL 157
            C +  D+P +   Q    H  CAGC   ++  A  R             CP CR   +  +   +  + + +     +C        QFC  ++ +     H+ E C    V C +N +GC W+GP  D++SH + C + K+  L
Sbjct:   57 CAVCLDLPRSAVYQCSNGHLMCAGCFTHLLADARIRDETA--------TCPNCRVEISRSLATRNLAVEKAVSELPAEC--------QFCSQKYPRNSLDRHEMELCEERPVHCRYNVLGCGWRGPHHDVSSHEQQCQHRKLFSL 185          
BLAST of mRNA_H-canaliculatus_F_contig1040.417.1 vs. uniprot
Match: UPI001E676961 (cysteine and histidine-rich protein 1 homolog isoform X1 n=5 Tax=Decapoda TaxID=6683 RepID=UPI001E676961)

HSP 1 Score: 58.5 bits (140), Expect = 1.540e-5
Identity = 36/144 (25.00%), Postives = 58/144 (40.28%), Query Frame = 0
Query:   22 CFMWFDMPVAPPCQ----HSFCAGCLKSVVRAAATRQRRNGNSQPLRPACPLCRETFTPEVVQPSAKIFEEMLRATVKCRNGGDCVAQFCPLRWKK-----HQQEECPSAKVQCMHNAVGCAWKGPRRDLTSHVECCAYEKIKG 156
            C +  D+P +   Q    H  CAGC   ++  A  R             CP CR   +  +   +  + + +     +C        QFC  ++ +     H+ E C    V C +N +GC W+GP  D+TSH + C +    G
Sbjct:   60 CAVCLDLPRSAVYQCSNGHLMCAGCFTHLLADARIRDETA--------TCPNCRVEISRSLATRNLAVEKAVSELPAEC--------QFCGQKYPRNSLDRHEVELCEERPVHCQYNVLGCGWRGPHHDVTSHEQQCQHPSHTG 187          
BLAST of mRNA_H-canaliculatus_F_contig1040.417.1 vs. uniprot
Match: UPI001FB7B6FE (cysteine and histidine-rich protein 1 homolog isoform X2 n=1 Tax=Penaeus chinensis TaxID=139456 RepID=UPI001FB7B6FE)

HSP 1 Score: 57.8 bits (138), Expect = 1.730e-5
Identity = 35/144 (24.31%), Postives = 58/144 (40.28%), Query Frame = 0
Query:   22 CFMWFDMPVAPPCQ----HSFCAGCLKSVVRAAATRQRRNGNSQPLRPACPLCRETFTPEVVQPSAKIFEEMLRATVKCRNGGDCVAQFCPLRWKK-----HQQEECPSAKVQCMHNAVGCAWKGPRRDLTSHVECCAYEKIKG 156
            C +  D+P +   Q    H  CAGC   ++  A  R             CP CR   +  +   +  + + +     +C        QFC  ++ +     H+ E C    V C +N +GC W+GP  D++SH + C +    G
Sbjct:   57 CAVCLDLPRSAVYQCSNGHLMCAGCFTHLLADARIRDETA--------TCPNCRVEISRSLATRNLAVEKAVSELPAEC--------QFCSQKYPRNSLDRHEMELCEERPVHCRYNVLGCGWRGPHHDVSSHEQQCQHPSHTG 184          
BLAST of mRNA_H-canaliculatus_F_contig1040.417.1 vs. uniprot
Match: A0A8M1KF71_CLUHA (E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A8M1KF71_CLUHA)

HSP 1 Score: 57.4 bits (137), Expect = 5.540e-5
Identity = 42/157 (26.75%), Postives = 70/157 (44.59%), Query Frame = 0
Query:   11 VANDEAWSCPICFMWFDMPVAPPCQHSFCAGCLKSVVRAAATRQRRNGNSQPLRPACPLCRETFTPEVVQPS----AKIFEEMLR--------ATVKCRNGGDCVAQFCPLRWKKHQQEECPSAKVQCMHNAVGCAWKGPRRDLTSHVECCAYEKIK 155
            V N+E + CPIC      PVA PC HS+C GC++    +       +G+ + +  +CP CR++FTP  +       A++ EE+ +        AT          A  C    +    + C  +K + + + + C     +  L +H EC A +K K
Sbjct:    7 VLNNEEFCCPICLDLLKDPVAIPCGHSYCMGCIRGYWAS-------DGDLETV--SCPQCRQSFTPRPILKRNTLPAEMVEELKKMHLQAASPATAATTXXXXXXAALCLGTSEDVPCDLCTRSKRRAVKSCLMCLASYCKLHLQAHYECPALKKHK 154          
BLAST of mRNA_H-canaliculatus_F_contig1040.417.1 vs. uniprot
Match: UPI001560B58F (E3 ubiquitin-protein ligase TRIM47-like n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI001560B58F)

HSP 1 Score: 55.5 bits (132), Expect = 7.700e-5
Identity = 41/155 (26.45%), Postives = 62/155 (40.00%), Query Frame = 0
Query:   11 VANDEAWSCPICFMWFDMPVAPPCQHSFCAGCLKSVVRAAATRQRRNGNSQPLRPACPLCRETFTPEVVQPSAKIFEEMLRATVKC----------RNGGDCVAQFCPLRWKKHQQEECPSAKVQCMHNAVGCAWKGPRRDLTSHVECCAYEKIK 155
            V +++ +SCP+C      PVA PC HS+C GC+K+            G       +CP CRETFTP  V     +  E++    K              GD +  FC  R            K + + + + C        + SH E  A+++ K
Sbjct:    5 VWSEDRFSCPVCLDLLKDPVAIPCGHSYCMGCIKNCWDQTD----HTGVY-----SCPQCRETFTPRTVLRRNNMLAELVEELKKIGLNPSPAQSFAGPGDVMCDFCTGR------------KFKAVKSCLTCLASYCETHVKSHSEVAAFKRHK 138          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1040.417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KZ19_9PHAE2.130e-27868.42RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S3Y988_HETAK3.190e-1650.57Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI001425A99E1.940e-931.76ligand of Numb protein X 2-like n=1 Tax=Anneissia ... [more]
W5K6E2_ASTMX2.780e-728.74Uncharacterized protein n=3 Tax=Astyanax mexicanus... [more]
UPI0018A791CF1.680e-624.83LOW QUALITY PROTEIN: cysteine and histidine-rich p... [more]
UPI001E6769611.540e-525.00cysteine and histidine-rich protein 1 homolog isof... [more]
UPI001FB7B6FE1.730e-524.31cysteine and histidine-rich protein 1 homolog isof... [more]
A0A8M1KF71_CLUHA5.540e-526.75E3 ubiquitin/ISG15 ligase TRIM25-like n=1 Tax=Clup... [more]
UPI001560B58F7.700e-526.45E3 ubiquitin-protein ligase TRIM47-like n=1 Tax=Ac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 338..358
NoneNo IPR availablePANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 14..155
NoneNo IPR availablePANTHERPTHR10131:SF129TNF RECEPTOR-ASSOCIATED FACTOR 6coord: 14..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 339..537
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 308..318
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 262..280
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 562..563
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 281..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 538..561
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 319..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 286..307
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..250
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 251..261
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 14..77
NoneNo IPR availableTMHMMTMhelixcoord: 285..307
NoneNo IPR availableTMHMMTMhelixcoord: 539..561
NoneNo IPR availableTMHMMTMhelixcoord: 227..249
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 19..70
e-value: 5.1E-8
score: 42.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 19..71
score: 11.25
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 19..52
e-value: 3.3E-9
score: 36.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 7..156
e-value: 2.1E-15
score: 58.7
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 34..43
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 114..154
score: 8.596
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 93..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1040contigH-canaliculatus_F_contig1040:19621..27770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1040.417.1mRNA_H-canaliculatus_F_contig1040.417.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1040 19114..28584 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1040.417.1 ID=prot_H-canaliculatus_F_contig1040.417.1|Name=mRNA_H-canaliculatus_F_contig1040.417.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=564bp
MESSPASEEPVANDEAWSCPICFMWFDMPVAPPCQHSFCAGCLKSVVRAA
ATRQRRNGNSQPLRPACPLCRETFTPEVVQPSAKIFEEMLRATVKCRNGG
DCVAQFCPLRWKKHQQEECPSAKVQCMHNAVGCAWKGPRRDLTSHVECCA
YEKIKGLVPRVSASLKQMHTQVHHLEARIMAQNAAAANTRAMLAHQRQPG
HVFPAVYALLWRPTDWRRYSCPSPNGVLSNVTLICLAPIVFLALWGAGMF
GGGDGLRASDRVVCFGGVSVMGFVAILEYNNGAPWHILRGVAVGDLLLQF
TARLVVYCTIRALPTWKRLPALLSLLAPLFYPTIVQAVHRLQVQVKNAHN
QAQRAHAQPPLPPVEPLVSSAVKVHGAVINGVVRGSCMLVCGREATLVGE
GLAKLVVFFSCAVLGPEKQDAFCDHVWVAMSTGIALDDKDRLKERHDMIF
KEMKAPLPSTTGRKARGFTATACVCLFAWVVSCFRESLEMIGYSRLLLSI
LDTAHFRLELHIGRLVMGSLQQTRTDRSTDPGRTRANYLLISRIFFFWVV
VGSIFFILLILTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like
IPR001293Znf_TRAF
IPR017907Znf_RING_CS
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH
IPR001841Znf_RING