mRNA_H-canaliculatus_F_contig1539.3983.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1539.3983.1
Unique NamemRNA_H-canaliculatus_F_contig1539.3983.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Match: D8LC22_ECTSI (Glyco_transf_41 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC22_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 4.370e-125
Identity = 179/232 (77.16%), Postives = 205/232 (88.36%), Query Frame = 1
Query:    1 GEDDGISGGVVWYPVKAYDISRPPDVFVAWRYQVSLHLAEGSGRQFLWLQDLVA-PYFSGVANGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQDGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHVPTATLEVYYGFSDNFLKWGQDNVVRFEEWMGDMNRLLRQEGVLYKGMVDHDTLHDAFARAGFILYPTAFPETGCVSLIKAMAMGAIPITSRFPNSTLP 693
            G +DG +GGVVWYP KA+D+SRPPDVFVAWRYQVSLHLAEGSGR+FLWLQD++  P  +G A+ LDGVFCPSLYHVSVI+PEA+RSLGRVLPNGIDS +F DG NSPD+FVYGSAPNRGL  VL+MWP+IRS +PTATLEVYYGFSDNF++W + NV   +EW+  M RLL QEG+LY GMVDH TLHDA+ARAGF+LYPT+FPETGCVSLIKAMAMG+IPITSRFP STLP
Sbjct:  565 GAEDGGAGGVVWYPYKAFDVSRPPDVFVAWRYQVSLHLAEGSGRRFLWLQDVLEDPLSTGFADNLDGVFCPSLYHVSVIQPEALRSLGRVLPNGIDSRIFSDGDNSPDLFVYGSAPNRGLSGVLLMWPYIRSQIPTATLEVYYGFSDNFMEWAKTNVNGVDEWVAGMKRLLDQEGILYMGMVDHQTLHDAYARAGFVLYPTSFPETGCVSLIKAMAMGSIPITSRFPTSTLP 796          
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Match: A0A7S3UR32_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UR32_HETAK)

HSP 1 Score: 242 bits (617), Expect = 1.670e-75
Identity = 121/231 (52.38%), Postives = 151/231 (65.37%), Query Frame = 1
Query:   25 GVVWYPVKAYDISRPPDVFVAWRYQVSLHLAEGSGRQFLWLQDL--VAPYFSGVANGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQDGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHVPTAT------LEVYYGFSDNFLKWGQDNVVRFEEWMGDMNRLLRQEGVLYKGMVDHDTLHDAFARAGFILYPTAFPETGCVSLIKAMAMGAIPITSRFPNSTLP 693
            GV WYP ++YD S PPD FV WRY +S+ L+  +G +FLWLQD      Y     + L G+F  S YHV    P+  +  G V PNGID    +DG NSP+VFVYGSAP+RGL  +L+ WP IR  +  A       LEVYYGFS +FL    + +   + W+  M  LL+QEG++Y+GMVDH TL  A+A AGFILYPT FPETGCV+L+KA AMG +PITSRF  STLP
Sbjct:   32 GVYWYPYQSYDTSAPPDYFVGWRYHISMALSSTAGGRFLWLQDKPPYETYLPKFISDLSGIFALSDYHVRTF-PQHAQPKGVVTPNGIDPEFLEDGPNSPNVFVYGSAPDRGLEMLLLCWPQIREGLAIAAPGTKAKLEVYYGFSKSFLVHAANTIPDHKAWISRMETLLKQEGIVYRGMVDHSTLASAYASAGFILYPTIFPETGCVTLMKAQAMGVVPITSRFEGSTLP 261          
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Match: A0A7S2MF16_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MF16_9STRA)

HSP 1 Score: 215 bits (547), Expect = 3.690e-65
Identity = 120/261 (45.98%), Postives = 151/261 (57.85%), Query Frame = 1
Query:    1 GEDDGISGGVVWYPVKAYDISRPP--DVFVAWRYQVSLHLA---------------------EGSGRQFLWLQDL------VAPYFSGVANGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQDGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHV-PTATLEVYYGFSDNFLKWGQDNVVRFEEWMGDMNRLLRQEGVLYKGMVDHDTLHDAFARAGFILYPTAFPETGCVSLIKAMAMGAIPITSRFPNSTLP 693
            G DD    GV WYP   +++   P  DVFVAWRY +S  L                        S + F+WLQD+       +P FS   + L G+FC S +H S + P   R    + PNGID + F DG N    FVY SAPNRGL  VL  WP I+  + P+A L VYYGFSD+F+K+G+  +  F+ W  +M  +L+  GV Y GMVDH TL   FAR+GFILYPT FPETGCV+L+KA AMG IPIT+R+  STLP
Sbjct:   34 GRDD---WGVYWYPCSYFNLVTVPTIDVFVAWRYHISTALVIPSFTDDVTHPKDRLSSSETRGSSPKVFVWLQDVPSTVTYTSPAFS---SHLSGIFCLSRFHASYL-PAPAREKAIITPNGIDPNYFADGPNDATTFVYSSAPNRGLDTVLRSWPEIKRRLGPSAELLVYYGFSDSFMKYGRSTMKDFDAWHAEMMEMLQYNGVSYHGMVDHKTLAQGFARSGFILYPTTFPETGCVTLMKAQAMGCIPITTRYAGSTLP 287          
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Match: A0A8J2SQR3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQR3_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.100e-64
Identity = 112/229 (48.91%), Postives = 150/229 (65.50%), Query Frame = 1
Query:   19 SGGVVWYPVKAYDISRPPDVFVAWRYQVSLHLAEGSG--RQFLWLQDLVA--PYFSGVANGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQDGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHVPTATLEVYYGFSDNFLKWGQDNVVRFEEWMGDMNRLLRQEGVLYKGMVDHDTLHDAFARAGFILYPTAFPETGCVSLIKAMAMGAIPITSRFPNSTLP 693
            S G+ W     Y    PPDVFVAWRY VS  +   +   + + WLQDL     +     +GL G+F  S +H   + P   +S     PNGID +  +DG N  D+FVYGSAPNRGL  +L++WP +++ +P+A L+VYYGFS   +KWG+ +V  F+EW  ++ RLL Q+GV+ +GMV HDTL  A+A AGF LYPT +PETGCVS++KAMAMGAIPITSR+  S +P
Sbjct: 1039 SYGIRWLRHATYQDEEPPDVFVAWRYHVSTAVVSPTSNVKVYAWLQDLPGYNSWTPTFCDGLSGIFTLSQFHTRSL-PSHAQSKAYETPNGIDPTFLRDGMNKWDLFVYGSAPNRGLYDLLLVWPRVKAAIPSAVLKVYYGFSKAVVKWGKQHVPMFDEWRNEVERLLEQDGVILEGMVPHDTLAQAYASAGFYLYPTTYPETGCVSVMKAMAMGAIPITSRYAESVVP 1266          
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Match: A0A6A3SZM4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SZM4_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.510e-64
Identity = 118/227 (51.98%), Postives = 149/227 (65.64%), Query Frame = 1
Query:   28 VVWYPVKAYDIS-RPPDVFVAWRYQVSLHLAEGSGRQFLWLQDLV---APYFSGVANGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQDGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHVPTATLEVYYGFSDNFLKWGQDNVVRFEEWMGDMNRLLRQE-GVLYKGMVDHDTLHDAFARAGFILYPTAFPETGCVSLIKAMAMGAIPITSRFPNSTLP 693
            V WYP   YD+  R  D+FVAWRY +S+ +   + ++FLW+ DL    A   S + + +DG+FC S +H S+  PE+ +S   V  N +D S F +G N  D FVYGSAP+RGL AVL  WP IR  +PTA L V+YGF   FLKWGQ  +  F EWM +MNRLL +  GV Y G+V+H  L   ++ AGF LYPTAF ET C+SL+KAMA GAIPITSRFP S LP
Sbjct: 1064 VRWYPHYTYDVDDRGVDMFVAWRYHISIAMGNAAWKKFLWMHDLPQEDAKRSSELLDNVDGIFCLSNFHASMF-PESFQSKITVSTNAVDPSFFVNGPNHADRFVYGSAPSRGLFAVLQAWPRIREVIPTAELSVFYGFRPAFLKWGQSQMNNFTEWMAEMNRLLTETPGVRYVGLVNHAQLAKEYSYAGFYLYPTAFSETSCISLMKAMATGAIPITSRFPASALP 1289          
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Match: G4YET0_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YET0_PHYSP)

HSP 1 Score: 224 bits (572), Expect = 7.110e-64
Identity = 117/227 (51.54%), Postives = 149/227 (65.64%), Query Frame = 1
Query:   28 VVWYPVKAYDIS-RPPDVFVAWRYQVSLHLAEGSGRQFLWLQDLV---APYFSGVANGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQDGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHVPTATLEVYYGFSDNFLKWGQDNVVRFEEWMGDMNRLLRQE-GVLYKGMVDHDTLHDAFARAGFILYPTAFPETGCVSLIKAMAMGAIPITSRFPNSTLP 693
            V WYP  AYD+  R  D+FVAWRY +SL + + + ++FLW+ DL    A   S + N +DG+FC S +H S+  P++ +S   V  N +D S F  G N  D FVYGS+P+RGL AVL  WP IR  +PTA L V+YGF   F+KWGQ  +  F EWM +MNRLL +  GV Y G+V+H  L   ++ AGF LYPT F ET C+SL+KAMA GAIPITSRFP S LP
Sbjct: 1066 VRWYPHYAYDVDDRGVDMFVAWRYHISLAMGQAAWKKFLWMHDLPQEDAKRSSELLNSVDGIFCLSDFHASMF-PDSFQSKITVSTNAVDPSFFVHGPNHADRFVYGSSPSRGLYAVLQAWPRIRELIPTAELAVFYGFRPAFMKWGQSQMPNFTEWMVEMNRLLTETPGVRYVGLVNHAQLAKEYSYAGFYLYPTTFSETSCISLMKAMANGAIPITSRFPASALP 1291          
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Match: H3HC89_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HC89_PHYRM)

HSP 1 Score: 223 bits (569), Expect = 1.560e-63
Identity = 114/227 (50.22%), Postives = 148/227 (65.20%), Query Frame = 1
Query:   28 VVWYPVKAYDIS-RPPDVFVAWRYQVSLHLAEGSGRQFLWLQDLV---APYFSGVANGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQDGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHVPTATLEVYYGFSDNFLKWGQDNVVRFEEWMGDMNRLLRQE-GVLYKGMVDHDTLHDAFARAGFILYPTAFPETGCVSLIKAMAMGAIPITSRFPNSTLP 693
            V WYP  AYDI  R  D+FVAWRY +S+ + + + +++LW+ DL    A     + +  DG+FC S  H S   PE+++S   V+ N +D S F +G N  D FVYGSAP RGL  +L +WP IR  +P+A L V+YGF   F+KWG  N+V F EWM +MNRLL +  GV Y G+VDH  L   ++ AGF LYPT F ET C+SL+KAMA GA+PITSRFP S LP
Sbjct:  902 VRWYPHYAYDIEDRGVDIFVAWRYHISMAMGKAARKKYLWMHDLPQEDAKQSPELLHNADGIFCLSDLHTSAF-PESLQSKITVITNAVDPSFFVNGPNHADRFVYGSAPTRGLYTLLRVWPRIRESIPSAELSVFYGFRPAFIKWGNANMVNFTEWMTEMNRLLTETPGVRYVGLVDHAQLAKEYSYAGFYLYPTTFSETSCISLMKAMANGAVPITSRFPASALP 1127          
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Match: A0A2R5GB10_9STRA (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GB10_9STRA)

HSP 1 Score: 222 bits (565), Expect = 6.310e-63
Identity = 113/230 (49.13%), Postives = 148/230 (64.35%), Query Frame = 1
Query:   28 VVWYPVKAYDISRPPDVFVAWRYQVSLHLAEGSGRQFLWLQDLVAPYFSGVA-----NGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQDGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHVPTATLEVYYGFSDNFLKWGQDNVVRFEEWMGDMN---RLLRQEGVLYKGMVDHDTLHDAFARAGFILYPTAFPETGCVSLIKAMAMGAIPITSRFPNSTLP 693
            V W+P  AYD   P DVFVAWRY +SL + + S  + LWL D+V+     +A       L  V   S +HVS + PE V+    V+ NG+ S+ F  G N+ + F+Y SAPNRGL  +L +WP IR+ +  A L +YYGFS +F++WG  ++  FE W+  +N   + L  EGV Y GMV H  L  A+ARAGF LYPT+FPETGCVS++KAMAMG+IPITSRF NS LP
Sbjct: 1134 VYWFPHTAYDAQDPADVFVAWRYHISLAIGQSSKVRLLWLHDVVSSLGPQIALQHKQGALHAVLAISRFHVSSM-PEDVQRSTVVIGNGLQSTYFTQGGNANNEFIYASAPNRGLEQLLRVWPRIRASISDARLRIYYGFSPSFMRWGATSIHEFETWVHQLNTTIQTLAAEGVEYVGMVSHQDLAKAYARAGFSLYPTSFPETGCVSMMKAMAMGSIPITSRFENSALP 1362          
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Match: F0YC42_AURAN (Uncharacterized protein TPR2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC42_AURAN)

HSP 1 Score: 222 bits (565), Expect = 6.320e-63
Identity = 118/230 (51.30%), Postives = 143/230 (62.17%), Query Frame = 1
Query:   25 GVVWYPVKAYDISRPPDVFVAWRYQVSLHLAEGSGRQFLWLQDLVAPYFSGVA---NGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQDGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHVPTATLEVYYGFSDNFLKWGQDNVVRFEEWMGDMNRLLRQEGVL----YKGMVDHDTLHDAFARAGFILYPTAFPETGCVSLIKAMAMGAIPITSRFPNSTLP 693
            GV W     YD SRPPDVFVAWRY VS  +A+ +          V  Y S  A   +GL G+F  S +H + + P A R      PNGID S   DG N+  VF YGSAPNRGL  VL  WP +R  VP ATL VYYGFS  F+ WG  ++  F+ W  ++ RLLRQ G +    Y+GMV HD L   +ARAGF+LYPT +PETGCVS++KAMA+GAIPITSRF  S +P
Sbjct: 1024 GVAWLRHATYDASRPPDVFVAWRYHVSTAVADPA------THGKVPGYGSWTAPFVDGLAGIFTLSKFHTATLPP-AARPKAYETPNGIDPSFLVDGDNAATVFAYGSAPNRGLYEVLKGWPAVRGRVPNATLVVYYGFSPAFVTWGARHIPAFDAWRAEVERLLRQPGAVPGVDYRGMVGHDELARGYARAGFVLYPTTYPETGCVSVMKAMALGAIPITSRFAGSVVP 1246          
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Match: A0A8J5MHY8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MHY8_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.760e-62
Identity = 111/234 (47.44%), Postives = 146/234 (62.39%), Query Frame = 1
Query:    7 DDGISGGVVWYPVKAYDIS-RPPDVFVAWRYQVSLHLAEGSGRQFLWLQDLV---APYFSGVANGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQDGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHVPTATLEVYYGFSDNFLKWGQDNVVRFEEWMGDMNRLLRQE-GVLYKGMVDHDTLHDAFARAGFILYPTAFPETGCVSLIKAMAMGAIPITSRFPNSTLP 693
            D      V WYP   YDI+ +  D+FVAWRY +S+ +   + ++FLW+ DL    A     + N  DG+FC S +H +V  PE ++S   V  N +D S F +G N  D FVYGS+P+RGL  +L  WP IR  +PTA L V+YGF+  F+KWG   +  F EWM +MNRL+ +  GV Y G+ +H  L   ++ AGF LYPT F ET C+SL+KAMA GAIPITSRFP S LP
Sbjct:  497 DQADEDNVRWYPHYTYDINDKGVDIFVAWRYHISMAMGRAARKKFLWMHDLPQEDARRSPELLNNADGIFCLSKFHAAVF-PEILQSKITVSTNAVDRSFFVNGPNHADRFVYGSSPSRGLYPLLKAWPRIREKIPTAELSVFYGFTPAFMKWGNSEMTNFTEWMNEMNRLVTETPGVRYVGLANHAQLAKEYSYAGFYLYPTTFSETSCISLMKAMANGAIPITSRFPLSALP 729          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1539.3983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC22_ECTSI4.370e-12577.16Glyco_transf_41 domain-containing protein n=1 Tax=... [more]
A0A7S3UR32_HETAK1.670e-7552.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2MF16_9STRA3.690e-6545.98Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J2SQR3_9STRA1.100e-6448.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6A3SZM4_9STRA1.510e-6451.98Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
G4YET0_PHYSP7.110e-6451.54Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
H3HC89_PHYRM1.560e-6350.22Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A2R5GB10_9STRA6.310e-6349.13UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
F0YC42_AURAN6.320e-6351.30Uncharacterized protein TPR2 n=1 Tax=Aureococcus a... [more]
A0A8J5MHY8_9STRA1.760e-6247.44Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1539contigH-canaliculatus_F_contig1539:3553..7882 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.0
Seed ortholog evalue1.5e-105
Seed eggNOG ortholog2880.D8LC22
EggNOG free text desc.protein N-acetylglucosaminyltransferase activity
EggNOG OGsCOG3914@1,KOG4626@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons8
Model size696
Cds size693
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1539.3983.1prot_H-canaliculatus_F_contig1539.3983.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1539 3553..7881 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929275.036697-CDS-H-canaliculatus_F_contig1539:3552..36441622929275.036697-CDS-H-canaliculatus_F_contig1539:3552..3644Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 3553..3644 +
1696845746.3708532-CDS-H-canaliculatus_F_contig1539:3552..36441696845746.3708532-CDS-H-canaliculatus_F_contig1539:3552..3644Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 3553..3644 +
1622929275.053689-CDS-H-canaliculatus_F_contig1539:4514..45721622929275.053689-CDS-H-canaliculatus_F_contig1539:4514..4572Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 4515..4572 +
1696845746.381422-CDS-H-canaliculatus_F_contig1539:4514..45721696845746.381422-CDS-H-canaliculatus_F_contig1539:4514..4572Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 4515..4572 +
1622929275.0657332-CDS-H-canaliculatus_F_contig1539:5238..53551622929275.0657332-CDS-H-canaliculatus_F_contig1539:5238..5355Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 5239..5355 +
1696845746.3893461-CDS-H-canaliculatus_F_contig1539:5238..53551696845746.3893461-CDS-H-canaliculatus_F_contig1539:5238..5355Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 5239..5355 +
1622929275.0799577-CDS-H-canaliculatus_F_contig1539:5761..58581622929275.0799577-CDS-H-canaliculatus_F_contig1539:5761..5858Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 5762..5858 +
1696845746.3974106-CDS-H-canaliculatus_F_contig1539:5761..58581696845746.3974106-CDS-H-canaliculatus_F_contig1539:5761..5858Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 5762..5858 +
1622929275.0911372-CDS-H-canaliculatus_F_contig1539:6264..63171622929275.0911372-CDS-H-canaliculatus_F_contig1539:6264..6317Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 6265..6317 +
1696845746.4061747-CDS-H-canaliculatus_F_contig1539:6264..63171696845746.4061747-CDS-H-canaliculatus_F_contig1539:6264..6317Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 6265..6317 +
1622929275.1028855-CDS-H-canaliculatus_F_contig1539:6562..66801622929275.1028855-CDS-H-canaliculatus_F_contig1539:6562..6680Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 6563..6680 +
1696845746.41701-CDS-H-canaliculatus_F_contig1539:6562..66801696845746.41701-CDS-H-canaliculatus_F_contig1539:6562..6680Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 6563..6680 +
1622929275.1159716-CDS-H-canaliculatus_F_contig1539:7494..75691622929275.1159716-CDS-H-canaliculatus_F_contig1539:7494..7569Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 7495..7569 +
1696845746.4347024-CDS-H-canaliculatus_F_contig1539:7494..75691696845746.4347024-CDS-H-canaliculatus_F_contig1539:7494..7569Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 7495..7569 +
1622929275.132153-CDS-H-canaliculatus_F_contig1539:7798..78811622929275.132153-CDS-H-canaliculatus_F_contig1539:7798..7881Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 7799..7881 +
1696845746.4455204-CDS-H-canaliculatus_F_contig1539:7798..78811696845746.4455204-CDS-H-canaliculatus_F_contig1539:7798..7881Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1539 7799..7881 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1539.3983.1

>prot_H-canaliculatus_F_contig1539.3983.1 ID=prot_H-canaliculatus_F_contig1539.3983.1|Name=mRNA_H-canaliculatus_F_contig1539.3983.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=231bp
GEDDGISGGVVWYPVKAYDISRPPDVFVAWRYQVSLHLAEGSGRQFLWLQ
DLVAPYFSGVANGLDGVFCPSLYHVSVIKPEAVRSLGRVLPNGIDSSVFQ
DGANSPDVFVYGSAPNRGLRAVLMMWPFIRSHVPTATLEVYYGFSDNFLK
WGQDNVVRFEEWMGDMNRLLRQEGVLYKGMVDHDTLHDAFARAGFILYPT
AFPETGCVSLIKAMAMGAIPITSRFPNSTLP
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mRNA from alignment at H-canaliculatus_F_contig1539:3553..7882+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1539.3983.1 ID=mRNA_H-canaliculatus_F_contig1539.3983.1|Name=mRNA_H-canaliculatus_F_contig1539.3983.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4330bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1539:3553..7882+ (Hapterophycus canaliculatus Oshoro5f female)
GGGGAGGACGACGGGATCTCCGGCGGGGTGGTCTGGTACCCGGTCAAGGC GTACGATATCTCCCGGCCTCCGGACGTGTTCGTGGCATGGAGGTACGCGA ATCAGAGCCGAGTGAAGCTGATCTGAGCCGCGGCGAAGGATGGTGCGGGG GGAAGGGCCGGTAATCACGATATGCCACGCCTGAAGTCTCTGTGTTCCAA AGTGGCTATCTGTGTCTTGGCCAACCTGGACACCGAATTGTGGATCGTCC TTACCTACGAAGCCGCCAAAAGCGATTAACACTGCGGTAAATTGTAAATT GATCATGCCGAAAAGTTGATACATGGTCGTATTCACATAGAGGTGAGCCG GGTTGGAGTAGGCTGGGTTTCAACCGAGGTTGGGAGATCCGCGGTGGGTG GTGCTGCATATCTACTCCTCTTGAAAGCCGTGGCGCCGAGGTATCAGGGT TCTGGAAAGGGGGAGAGACGGTTGTAAGAGGGGGAAATGACGGACAAAGA CATACCTGGTACGTATGCTAACCGGGGGTTTAAGACGATGGAGTCGACGG ACTAGCGTGGCAGCTTTTTGTTGCAGCCTTCTTCTGGCCTACTGACATGT GCTACTTGGCAACCAGAGAGCGTATGCAGCCGCGCGTACTCGCACCATGT GGCGCAGACGTTCTTCGTTCGTTTTCCCCACTGCTGCCCAGGTCCCAACA CTTACGTTGATTGGTTCCAATCACGTTCGTCCCACTATGCGGTTCGAGTT CCTACCCCCGGCTCAGCTCCTGGTACATTTTGTACCCCATAATTTCCTTC ACGTAGCTTATCTGGATCCGCTGCCCAGTCCGTAATTCAGCACCGAACGG TGAGTAAATTTGTGCCAGGCGATTTCAACCACAGGAAACTTGATTGAACA GCTCGTGCTACCGTTCAGGTTTCATCTGAGCTGCTTTTGCCCACGTCTCG CATGGTTCCCAGGTATCAAGTGAGCCTGCACCTTGCGGAGGGCAGCGGGC GTCAATTCCTCTGGCTGCAGGCGAGCATTGGGCATTCCAAAGCCACGACA GGATAGCCTGAGGAGAGGGGATCTCGAAATAGACCATGTCATAGTTGTCG CCGACCTGCAACAGGCAGATGACAGTTCTGATTGAGGGGATCATCATCGC CAAAGTCATTTCGAGTCAATCATTGCACCGTCTTGGTCCTCCTGTGTATG AGGGTGTCTGAGAGGGAGTTTACCCCACGAAGAGTTCACCCCCTTTCCAA ATATTCCACCATTGACCTTTTTTAAAGAATATATCACAACACCGTTGGAA CACCTCCTCAGGTACGTCGTGCGAGGCGCAACTTGAGGCTTCCGTTGAGC TCCAATTTATGAGGGTTCATTGATTTGTAAGGTTAGGACAAAAATATGGA TCGTTAAGGATTTTTGCGTAACTTACCGCGATTTTATTTAATAACATACA GTTCTTCGAAATTCAATTTGTCAGGTGACAGCTTCGAGTTATCTCCCCTC GTACATCTCCCGCGTCCCATTTCCAGTTTTAGTCTCACGTGAACTCCAAG TGTCCATTCGGTCGGTACTCGACAGCCCTGAGTAACTAAGTCGCCATTCC ATGCACCCCTCTACCCATTCAAAAGGCTATCGTTGCTTTGTCCAACTTTT GAACAAGCCGATATCCCACGCTCGTACCATACACAGGATCTTGTAGCCCC TTACTTTTCGGGCGTGGCGAACGGCTTGGACGGCGTTTTCTGCCCTAGCC TGTACCACGTTAGCGTCATCAAGCCGGAAGCTGTGCGGTCCCTGGGTCGC GTGGTGAGTAGCCATGCTTTCGGGTTTCGTTGACTAGTAAACGCTGGTGC AGCCAAGCGCGACCTTCGTGAACGTCGCAGTCTACGCGGACGCCAGCCTC ACGCGGACACCGACCAATGCCGGAAGCAGTCAACCGCTTGGTTGGTTCCC CACCTAAAAATTCTATAATAAGTACATTCGACGCAAACGGGGGCAGATCG AAGGTGTTCATCGAAAAAATTTCATGTTCGTGATTCGCGGTTCGCAGCCC GGATTCTTTCCGATTAATGTCCGATCGGACGTTGGTGCGTTTGTCTATCT ATTCAGTCCCGATGTACAAGTATCGTCATGGGACGTGTCATGGATGCCTT CGACAACACTCTAGTCCACCTAGTGGAAATGAACCCGGCCCTCTCGCTTT CCCGGCCAGTTGCCGAACGGGATCGATTCCAGCGTCTTCCAAGACGGAGC TAACAGCCCCGACGTGTTCGTGTACGGGAGCGCACCCAACAGGGGGCTTC GCGCCGGTGAGTGGGTGGACGTCCTTGCATGGCTTGGAATCGCCGAGGAA GCAGTCTCCGCGTGGAATTTTCGTTGGTAGTTTGATGCAACCCACTCGCA TGGTGAGCAGCGATGCTTCTGACAGATGGACGAGGCTCTGTTGCTTTCGA TTCCGTGTCTTCGCCGAAACGAGAGCAACTCCCGTTTTTCGTCCCCTCCA CCGTTTCGGTGGATGGTCCCTTCTATCTTGCCGCTGCACTCGCGGAGAAA CGTGGACGTATCTACTAAGACAGATTCTCAGCCTGTCGATTCACGCCTGA AATCGTTTCCGTAAACGCCACATGCGCTCCCCCCAACCTTGAAACCCTCC CCCCCCCCTGGCTCGCCCACCTGCACATGCTTGGCTTATGTGGATGGCTT TTAACGTTTCAGTACTTATGATGTGGCCGTTTATCCGAAGCCACGTACCA ACGGCAACATTGGAGGTGGGTGGGGCAAGAAGCACTGCCATTGAAAGGCA GGTACGGGAAATGATGTTCTCGATTGGATCCAAATGCATATCTGGAGGTC TAAGACCACCTGCTGTACTTGTTGGGGGGGCGTGGTTGGGTTAGTTTACA CGGCAAGTTTACGCTTGGGAAGGGTGGGGTTCGCAAAAAGCAGCCTATAC CGCTGATGCTTCGAATCCTTTCCCGCTCAAACGAGGATGGCGACGACAAC AACGACACAGGTTTACTACGGCTTTAGCGACAACTTTTTGAAGTGGGGGC AAGATAACGTTGTACGTTTCGAGGAGTGGATGGGCGACATGAATCGCCTG CTGCGCCAAGAGGGCGTCCTGTATAAGGGTGAGCTCATTACTCAGTGACC AAAGACAGGCACACACAACTCGTATTTAGCCAACCAACCTCTCAGTGTTG CGGATCAGCTCCACCTGGCGATGAACACGTTCAAAACAAATGCCGGGGTT GAATGCAAGTGCCGCCCGCTGTCGTTAGGATTTGCCCAACTTCGGCGACA AACATTGTTTTCGAATACCCACTCGTCCCTTGGTTTAGTCTTGTTGGACA ATCCGCCGGGCAGGACACTTCCTCCTGTCTGTCTTTTCCTTCCGAATTTC GCACGCATTTGTGCTGGGGTTAGTGCATGGTGCACCATTGCTGCGAATGG TGACCGGTGTGTGATGTGAGCATGATAGCAGCAATTCGTGTCAACCTGAG TTCCGAAATGAGACGTATATAACACTATAATGGGCTAGAACGAACTCCTG GAACTTTGAATGTGTCCACGGCGACGGGAGCATTTGATTCCCTTCGTACT GTAGACCCCACCCAATCTGTTCGTCAACGGATGCGGACCGCCGTGATGTG ACGTTTTTTGCGAAGAAAAATCTGGTGAAAGATTGCCTCGTGTAGCACAT GCAGCCGCAGGCATAGACCTCGTCGCCGAAACAACGGAAAGCAGCCTCAA GCAAGATCTGTTTTGGCAAACTCTTGTTGGTGGGGTCAAACGAACCATTC GAAAACAACGCGGTATCTAAGTCATGCGATGCACCAACTAAACGAATAAT TCATCACGTCTCGAGCGCTCGGTTAATCGCACAACGAACAACTGGCTAAG CATATCTCGCCATGTTTGCACGGCTGTCTCTTCTAACGATAGGAATGGTC GACCATGATACACTCCACGACGCCTTCGCTCGGGCGGGCTTCATCCTCTA CCCGACGGCCTTCCCGGGTGAAGCACTGTGTAGTTGAAACCCAAGAAAGG AACAATCATTTCATCTACACGACAATCTCGTAGATATTGGGGAGGGCCAC TACATCCGGGGGGGCGGGAGGCCCCGTCCAACCCCAACACTTCGATTTAC AAACACCACCCGTGCCCGGAAGAATGCGACGAGAATAACGCTACCGCGCA AAGAGAGATGCGTTCTGATCGCCCCACCCCATTCTTTGCTTTTCAGAAAC GGGTTGCGTTTCGCTCATCAAGGCCATGGCCATGGGGGCCATCCCTATTA CCAGTCGTTTCCCCAACTCCACTCTGCCGG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1539:3553..7882+

>mRNA_H-canaliculatus_F_contig1539.3983.1 ID=mRNA_H-canaliculatus_F_contig1539.3983.1|Name=mRNA_H-canaliculatus_F_contig1539.3983.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1386bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1539:3553..7882+ (Hapterophycus canaliculatus Oshoro5f female)
GGGGAGGACGACGGGATCTCCGGCGGGGTGGTCTGGTACCCGGTCAAGGC
GTACGATATCTCCCGGCCTCCGGACGTGTTCGTGGCATGGAGGGGGAGGA
CGACGGGATCTCCGGCGGGGTGGTCTGGTACCCGGTCAAGGCGTACGATA
TCTCCCGGCCTCCGGACGTGTTCGTGGCATGGAGGTATCAAGTGAGCCTG
CACCTTGCGGAGGGCAGCGGGCGTCAATTCCTCTGGCTGCAGGTATCAAG
TGAGCCTGCACCTTGCGGAGGGCAGCGGGCGTCAATTCCTCTGGCTGCAG
GATCTTGTAGCCCCTTACTTTTCGGGCGTGGCGAACGGCTTGGACGGCGT
TTTCTGCCCTAGCCTGTACCACGTTAGCGTCATCAAGCCGGAAGCTGTGC
GGTCCCTGGGTCGCGTGGATCTTGTAGCCCCTTACTTTTCGGGCGTGGCG
AACGGCTTGGACGGCGTTTTCTGCCCTAGCCTGTACCACGTTAGCGTCAT
CAAGCCGGAAGCTGTGCGGTCCCTGGGTCGCGTGTTGCCGAACGGGATCG
ATTCCAGCGTCTTCCAAGACGGAGCTAACAGCCCCGACGTGTTCGTGTAC
GGGAGCGCACCCAACAGGGGGCTTCGCGCCGTTGCCGAACGGGATCGATT
CCAGCGTCTTCCAAGACGGAGCTAACAGCCCCGACGTGTTCGTGTACGGG
AGCGCACCCAACAGGGGGCTTCGCGCCGTACTTATGATGTGGCCGTTTAT
CCGAAGCCACGTACCAACGGCAACATTGGAGTACTTATGATGTGGCCGTT
TATCCGAAGCCACGTACCAACGGCAACATTGGAGGTTTACTACGGCTTTA
GCGACAACTTTTTGAAGTGGGGGCAAGATAACGTTGTACGTTTCGAGGAG
TGGATGGGCGACATGAATCGCCTGCTGCGCCAAGAGGGCGTCCTGTATAA
GGGTTTACTACGGCTTTAGCGACAACTTTTTGAAGTGGGGGCAAGATAAC
GTTGTACGTTTCGAGGAGTGGATGGGCGACATGAATCGCCTGCTGCGCCA
AGAGGGCGTCCTGTATAAGGGAATGGTCGACCATGATACACTCCACGACG
CCTTCGCTCGGGCGGGCTTCATCCTCTACCCGACGGCCTTCCCGGGAATG
GTCGACCATGATACACTCCACGACGCCTTCGCTCGGGCGGGCTTCATCCT
CTACCCGACGGCCTTCCCGGAAACGGGTTGCGTTTCGCTCATCAAGGCCA
TGGCCATGGGGGCCATCCCTATTACCAGTCGTTTCCCCAACTCCACTCTG
CCGAAACGGGTTGCGTTTCGCTCATCAAGGCCATGGCCATGGGGGCCATC
CCTATTACCAGTCGTTTCCCCAACTCCACTCTGCCG
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