mRNA_H-canaliculatus_F_contig15002.3776.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig15002.3776.1
Unique NamemRNA_H-canaliculatus_F_contig15002.3776.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Match: D8LGJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ2_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 4.180e-98
Identity = 151/274 (55.11%), Postives = 196/274 (71.53%), Query Frame = 1
Query:    1 DERQEVANRVMKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVVKRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADKGVAAMREVVAYYVLGEKGRQKTSKKSIFSIPPVNKQNKATKSKGRESALKDTIGDAFAAGQELKAMMLKVFNAVGEGGSI-GQEQPVKMSADIGTTTPYCMANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQGVSPETLEGGTCGV 819
            DERQEV+NR+ KTL K+++   + K+ P AQ RE A+ + E  +I+ S T RDR REL VKR PA+  A   L+E P FKG+ GK +V++LDGR +PP +W++++ AA K  A M E V YYV  +K  +  +KK +FSIP  N  NKATKS+GR SALKD++G+++A GQE KA+ L +F+A  EGG +  Q+Q ++M A IG  TPY MAN TGGAKHANKAAGP KW++  C+DGF DD FYEA AH VDLPV+IHQGV PE LE GT G+
Sbjct:   23 DERQEVSNRLYKTLTKRVISSTIEKLEPIAQLREVAIFDIESHFIEKSHTERDRCRELAVKRAPAVRAAMDCLRESPAFKGDDGKDKVVALDGRVFPPVKWQEIIDAAVKARAKMHECVLYYVFKKKQLKGATKKKVFSIPARNSTNKATKSQGRSSALKDSVGNSYAGGQEWKALTLNMFDAAREGGGVVTQDQMLEMVASIGAATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYEADAHGVDLPVSIHQGVHPEYLEKGTAGL 296          
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Match: D8LEN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN1_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 6.630e-92
Identity = 148/274 (54.01%), Postives = 193/274 (70.44%), Query Frame = 1
Query:    1 DERQEVANRVMKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVVKRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADKGVAAMREVVAYYVLGEKGRQKTSKKSIFSIPPVNKQNKATKSKGRESALKDTIGDAFAAGQELKAMMLKVFNAVGEGGSI-GQEQPVKMSADIGTTTPYCMANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQGVSPETLEGGTCGV 819
            D  +EV+NR+ KTL K+++   + K+ P AQ RE A+ + E  +I+ S T RDR REL VKR PA+  A   L+E P FKG+ GK +V++LDGR +PP +W++++ AA K  A M E V YYV  +K     +KK +FSIP  N  NKATKS+GR SALKD++G+++A GQE KA+ L +F+A  EGG +  Q+Q ++M A IG  TPY MAN TGGAKHANKAAGP KW++  C+DGF DD FYEA AH VDLPV+IHQGV PE LE GT G+
Sbjct:  314 DNDKEVSNRLYKTLTKRVISSTIEKLEPIAQLREVAIFDIESHFIEKSHTERDRCRELAVKRAPAVRAAMDCLRESPAFKGDDGKDKVVALDGRVFPPVKWQEIIDAAVKARAKMHECVLYYVFKKKQLNGVTKKKVFSIPARNSTNKATKSQGRSSALKDSVGNSYAGGQEWKALTLNMFDAAREGGGVVTQDQMLEMVASIGAATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYEADAHGVDLPVSIHQGVHPEYLEKGTAGL 587          
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Match: D7FV07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV07_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 3.350e-91
Identity = 152/274 (55.47%), Postives = 193/274 (70.44%), Query Frame = 1
Query:    1 DERQEVANRVMKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVVKRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADKGVAAMREVVAYYVLGEKGRQKTSKKSIFSIPPVNKQNKATKSKGRESALKDTIGDAFAAGQELKAMMLKVFNAVGEGGSI-GQEQPVKMSADIGTTTPYCMANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQGVSPETLEGGTCGV 819
            DERQEV+NR+ KTL K+I   +  K+AP AQ RE A+  FE  +I+  RT RDR REL VKR PA+  A   L+E P FKG+ GK +V++LDGR +PP +W++++ AA K  A M E V YYV  +K  + T+KK +FSIP  N  NKATKS+GR SALKD++G+++A GQE K + L +F+A  EGG +  Q+Q ++M A IG  TPY MAN TGGAKHANKAAGP KW++   +DGF DD FYEA AH V LPV IHQGV PE LE GT G+
Sbjct:   23 DERQEVSNRLYKTLTKRISSTIE-KLAPIAQLREVAIFNFESHFIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPAFKGDDGKDKVVALDGRVFPPVKWQEIIDAAAKARAKMHECVLYYVFKKKKLKGTTKKKVFSIPARNSTNKATKSQGRSSALKDSVGNSYAGGQEWKVLKLNMFDAAREGGGVVTQDQMLEMVASIGAATPYSMANATGGAKHANKAAGPGKWVREHGADGFADDPFYEADAHGVGLPVPIHQGVHPEYLEKGTAGI 295          
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Match: A0A6H5JAK2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK2_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 7.340e-91
Identity = 151/279 (54.12%), Postives = 193/279 (69.18%), Query Frame = 1
Query:    1 DERQEVANRVMKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVVKRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADKGVAAMREVVAYYVLGEKGRQKTS-----KKSIFSIPPVNKQNKATKSKGRESALKDTIGDAFAAGQELKAMMLKVFNAVGEGGSI-GQEQPVKMSADIGTTTPYCMANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQGVSPETLEGGTCGV 819
            DERQEV+NR+ KTL K+I+   +  +AP AQ RE A+ +FE  +I+  RT RDR REL VKR PA+  A   L++   FKG+ GK +V+ LDGR +PP +W+++L +  K +A MRE V YYV  +K           KK +FSIP  N  NKATKS+GR SALKD++G+AFA GQE KA+ L +F+A  EGG +  Q + ++M A IG  TPY MAN TGGAKHANKAAGP KW++  C+DGF DD FY+A AH VDLPV+IHQGV PE LE GT G+
Sbjct:   23 DERQEVSNRLYKTLTKRILSSTIETLAPIAQLREVAIFDFESHFIEKQRTERDRCRELAVKRAPAVRAAVDCLRQSTAFKGDDGKDKVVGLDGRVFPPVKWQEILDSPAKALAKMRECVLYYVFKKKKLNGAKLKGAIKKKVFSIPARNSINKATKSQGRSSALKDSVGNAFAGGQEWKALTLNMFDAAREGGGVVTQAKMLEMVASIGAATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGI 301          
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Match: D7FIA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA9_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.920e-90
Identity = 150/279 (53.76%), Postives = 197/279 (70.61%), Query Frame = 1
Query:    1 DERQEVANRVMKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVVKRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADKGVAAMREVVAYYVLGEKGR-----QKTSKKSIFSIPPVNKQNKATKSKGRESALKDTIGDAFAAGQELKAMMLKVFNAVGEGGSI-GQEQPVKMSADIGTTTPYCMANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQGVSPETLEGGTCGV 819
            DERQEV+NR+ KTL K+I+   + K+AP AQ RE A+ +FE  +I+  RT RDR REL VKR PA+  A   L+E P F+G  GK +V++LDGR +PP +W+++L ++ K  A +RE + YYV  +K       +  +KK +FSIP  N  NKATKS+GR SAL D++G+A+A GQE KA+ L +F+A  EGG +  Q+Q ++M A IG  TPY MAN TGGAKHANKAAGP KW++  C+DGF DD FY+A AH VDLPV+IHQGV PE LE GT G+
Sbjct:  372 DERQEVSNRLYKTLTKRILSSTIEKLAPIAQLREVAIFDFESHFIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPAFEGGDGKDKVVALDGRVFPPVKWQEILDSSAKARAKLRECILYYVFKKKKLNGAKLKGATKKKVFSIPARNSINKATKSQGRSSALNDSVGNAYAGGQEWKALTLNMFDAAREGGGVVTQDQMLEMVASIGAATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGI 650          
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 1.420e-83
Identity = 148/279 (53.05%), Postives = 194/279 (69.53%), Query Frame = 1
Query:    1 DERQEVANRVMKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVVKRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADKGVAAMREVVAYYVLGEKGRQKT-----SKKSIFSIPPVNKQNKATKSKGRESALKDTIGDAFAAGQELKAMMLKVFNAVGEGGSI-GQEQPVKMSADIGTTTPYCMANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQGVSPETLEGGTCGV 819
            DERQEV+NR+ KTL K+I+   + K+AP AQ RE A+ +FE  +I+  RT RDR REL VKR PA+  A   L+E P F+G  GK +V++LDGR +PP + ++++ +     A +RE V YYV  +K    T     +KK +FSIP  N  NKATKS+GR SALKD++G+A+A GQE KA+ L + +A  EGG +  Q+Q ++M A +G  TPY MAN TGGAKHANKAAGP KW++  C+DGF DD FY+A AH VDLPV+IHQGV PE LE GT G+
Sbjct: 1131 DERQEVSNRLYKTLTKRILSSTIEKLAPIAQLREVAIFDFESHFIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPVFEGNDGKDKVVALDGRVFPPVKSQEIIDSPANARAKLRECVLYYVFKKKKLNGTKLKGATKKKVFSIPARNSINKATKSQGRSSALKDSVGNAYAGGQEWKALTLNMIDAAREGGGVVTQDQMLEMVASVGAATPYSMANATGGAKHANKAAGPGKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGI 1409          
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 1.110e-82
Identity = 145/279 (51.97%), Postives = 187/279 (67.03%), Query Frame = 1
Query:    1 DERQEVANRVMKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVVKRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADKGVAAMREVVAYYVLGEKGRQKT-----SKKSIFSIPPVNKQNKATKSKGRESALKDTIGDAFAAGQELKAMMLKVFNAVGEGGSI-GQEQPVKMSADIGTTTPYCMANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQGVSPETLEGGTCGV 819
            DER+EV+NR+ KTL K+I+   + K+ P AQ RE A+ +FE  +I+ +RT RDR RE VVKR PA+  A   L+E P  +G+ GK +V +LDGR +PP +W++ L +  K  A MRE V YYV  +K          +KK IFSIP  N  NKATK +GR SALKD++ +A+A GQE KA+ L +F+A  EGG +  Q+Q ++M A I   TPY MAN TGGAKH NKAAGP KW++    DGF DD FY+A AH VDLPV+ HQGV PE LE GT G+
Sbjct:  242 DERKEVSNRLYKTLAKRILSSTIEKLTPIAQLREVAIFDFESHFIEKTRTERDRCREFVVKRAPAVMAAMDCLRESPALEGDDGKDKVAALDGRVFPPVKWQEFLDSPAKARAKMRECVLYYVFKKKKLNGAKLNGATKKKIFSIPARNSINKATKRQGRSSALKDSVRNAYAGGQEWKALTLNMFDAAREGGGVVTQDQMLEMVASIRAATPYSMANATGGAKHTNKAAGPGKWVRDHGDDGFADDPFYDADAHGVDLPVSTHQGVHPEYLEKGTAGI 520          
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Match: A0A6H5J9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K2_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 6.060e-79
Identity = 141/272 (51.84%), Postives = 186/272 (68.38%), Query Frame = 1
Query:    4 ERQEVANRVMKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVVKRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADKGVAAMREVVAYYVLGEKGRQKTSKKSIFSIPPVNKQNKATKSKGRESALKDTIGDAFAAGQELKAMMLKVFNAVGEGGSIGQEQPVKMSADIGTTTPYCMANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQGVSPETLEGGTCGV 819
            ERQEVANR+ KTL K+I+   + K+APTAQ RE A  EF RE+++  RT RDR REL + R PA++KA   L++ P F+G+ GK +V++LD R +P A W+++LG     +  MR+ V Y++L              SIP ++ +NK+T+SKGR S LKDT+G+A+A GQE+KAM+L VF+AV   GS+ +EQ V M+  IG +TP+CMAN TGGAKHANK+A P KWLQ   SD   D+ FY A AH VDLPV+IHQGV    LEGG  GV
Sbjct:  695 ERQEVANRLYKTLTKRILPSFVHKLAPTAQLREIAEFEFGREFLEGPRTERDRCRELALLRAPAVKKAVQCLQDSPLFQGDLGKAKVVALDWRVFPEATWQEILGVPATALEKMRDFVLYFIL--------------SIPALSTENKSTRSKGRSSKLKDTVGNAYAGGQEMKAMVLNVFDAVVGRGSLTEEQVVDMATKIGASTPFCMANATGGAKHANKSADPTKWLQDHSSDAVADEPFYTACAHGVDLPVSIHQGVRQRDLEGGAHGV 952          
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Match: A0A6H5K5E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E1_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 2.670e-78
Identity = 136/273 (49.82%), Postives = 189/273 (69.23%), Query Frame = 1
Query:    1 DERQEVANRVMKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVVKRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADKGVAAMREVVAYYVLGEKGRQKTSKKSIFSIPPVNKQNKATKSKGRESALKDTIGDAFAAGQELKAMMLKVFNAVGEGGSIGQEQPVKMSADIGTTTPYCMANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQGVSPETLEGGTCGV 819
            DERQEVANR+  TL  +I    + K+APTAQ RE    EF RE+++  RT RD  REL + R PA+ KAT  L++ P F+G  GKG+V++LD R +P A+W+++LGA+   +A M++ V Y+V  +K +   +KK IFSIP +N +N++T+S GR S L+DT+G+A+A  QE+KA++L +++ +  GGS+ +EQ V M+  IG +TP+ MAN TGGAKHANK+ GP KWLQ   SD   D+ FY   A+ VDLPV+IHQGV    LEGG  GV
Sbjct:  372 DERQEVANRLYTTLTNRIFPSFIHKLAPTAQLREIDEFEFGREFLEGPRTERDSCRELALLRAPAVMKATQCLRDSPLFEGNLGKGKVVALDERVFPEAKWQEILGASATALAKMQDFVLYFVKKDKTKNGATKKKIFSIPALNTENESTRSNGRSSKLRDTVGNAYAGCQEMKAVVLNIWDMIEGGGSLSEEQVVDMATRIGASTPFSMANATGGAKHANKSEGPTKWLQDHSSDAVADEPFYTVHAYGVDLPVSIHQGVRQRDLEGGAQGV 644          
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Match: A0A6H5LAE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAE2_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 2.090e-71
Identity = 129/272 (47.43%), Postives = 172/272 (63.24%), Query Frame = 1
Query:    1 DERQEVANRVMKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVVKRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADKGVAAMREVVAYYVLGEKGRQKTSKKSIFSIPPVNKQNKATKSKGRESALKDTIGDAFAAGQELKAMMLKVFNAVGEGGSIGQEQPVKMSADIGTTTPYCMANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQGVSPETLEGGTCG 816
            DERQEVANRV KTL K+I+   + K+APTA  RE A  EF RE++                     E     L+  P F+G+ GKG+V++LDGR +P  +W+D+LGA       MRE + Y+V  +K ++  +K  IFSIP +  +NK+T+SKGR S LKDT+G+A A GQE+KA++L +++ V  GGS+ +EQ V M   +G +TP+ MAN TGGAKHANK+AGP KWLQ   SD   D+ F+   AH V LPV+IHQGV    LEGG  G
Sbjct:  112 DERQEVANRVYKTLTKRILPSFIHKLAPTAVLREIAEFEFGREFL---------------------EGPLQCLRASPSFEGDIGKGKVVALDGRVFPEGKWQDILGAPATASEKMREFILYFVKKDKTKKGATKNKIFSIPALITENKSTRSKGRSSKLKDTVGNACAGGQEMKAVVLNIWDMVEGGGSLSEEQVVGMVTRVGASTPFSMANATGGAKHANKSAGPTKWLQDHSSDAVADEPFFTVHAHGVGLPVSIHQGVRQRDLEGGAEG 362          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15002.3776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGJ2_ECTSI4.180e-9855.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEN1_ECTSI6.630e-9254.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FV07_ECTSI3.350e-9155.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAK2_9PHAE7.340e-9154.12Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FIA9_ECTSI1.920e-9053.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6D9_9PHAE1.420e-8353.05Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYE1_9PHAE1.110e-8251.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9K2_9PHAE6.060e-7951.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5E1_9PHAE2.670e-7849.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LAE2_9PHAE2.090e-7147.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15002contigH-canaliculatus_F_contig15002:290..1325 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score278.1
Seed ortholog evalue4.3e-72
Seed eggNOG ortholog2880.D7FIA9
EggNOG OGs2D5KK@1,2SYVY@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size819
Cds size789
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15002.3776.1prot_H-canaliculatus_F_contig15002.3776.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig15002 320..1325 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929244.5368361-UTR-H-canaliculatus_F_contig15002:289..3191622929244.5368361-UTR-H-canaliculatus_F_contig15002:289..319Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig15002 290..319 +
1696845733.4928687-UTR-H-canaliculatus_F_contig15002:289..3191696845733.4928687-UTR-H-canaliculatus_F_contig15002:289..319Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig15002 290..319 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929244.5481951-CDS-H-canaliculatus_F_contig15002:319..9351622929244.5481951-CDS-H-canaliculatus_F_contig15002:319..935Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15002 320..935 +
1696845733.507868-CDS-H-canaliculatus_F_contig15002:319..9351696845733.507868-CDS-H-canaliculatus_F_contig15002:319..935Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15002 320..935 +
1622929244.5609229-CDS-H-canaliculatus_F_contig15002:1152..13251622929244.5609229-CDS-H-canaliculatus_F_contig15002:1152..1325Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15002 1153..1325 +
1696845733.5189474-CDS-H-canaliculatus_F_contig15002:1152..13251696845733.5189474-CDS-H-canaliculatus_F_contig15002:1152..1325Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15002 1153..1325 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig15002.3776.1

>prot_H-canaliculatus_F_contig15002.3776.1 ID=prot_H-canaliculatus_F_contig15002.3776.1|Name=mRNA_H-canaliculatus_F_contig15002.3776.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=263bp
MKTLPKKIVECLMGKMAPTAQGREEAVMEFEREYIQPSRTARDRQRELVV
KRVPAIEKATAALKEGPGFKGESGKGRVLSLDGREWPPARWEDMLGAADK
GVAAMREVVAYYVLGEKGRQKTSKKSIFSIPPVNKQNKATKSKGRESALK
DTIGDAFAAGQELKAMMLKVFNAVGEGGSIGQEQPVKMSADIGTTTPYCM
ANVTGGAKHANKAAGPLKWLQSECSDGFQDDQFYEATAHAVDLPVTIHQG
VSPETLEGGTCGV
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mRNA from alignment at H-canaliculatus_F_contig15002:290..1325+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig15002.3776.1 ID=mRNA_H-canaliculatus_F_contig15002.3776.1|Name=mRNA_H-canaliculatus_F_contig15002.3776.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1036bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15002:290..1325+ (Hapterophycus canaliculatus Oshoro5f female)
GATGAGAGGCAGGAGGTTGCCAACCGTGTGATGAAGACGCTGCCGAAGAA GATCGTTGAGTGTTTGATGGGCAAGATGGCGCCGACTGCGCAGGGGAGGG AAGAGGCCGTCATGGAATTCGAGCGAGAGTATATCCAGCCATCTCGGACG GCCCGGGATAGACAGAGAGAGCTCGTAGTGAAACGCGTGCCGGCCATCGA AAAAGCGACCGCGGCTTTGAAGGAAGGCCCAGGGTTCAAGGGCGAGTCGG GGAAGGGGCGAGTTTTGTCACTGGACGGGAGAGAGTGGCCGCCGGCGCGC TGGGAGGACATGCTCGGGGCCGCAGACAAGGGAGTGGCCGCAATGCGGGA AGTGGTCGCGTACTACGTTCTGGGAGAGAAGGGAAGGCAAAAGACGAGCA AGAAGAGTATTTTTTCGATACCTCCTGTCAACAAACAGAACAAAGCAACG AAGAGTAAGGGAAGGGAGTCGGCGCTCAAGGACACTATCGGAGACGCCTT CGCGGCGGGACAAGAGCTCAAGGCCATGATGTTGAAAGTCTTCAACGCCG TTGGGGAGGGAGGGAGTATTGGCCAAGAGCAGCCAGTAAAGATGTCTGCT GATATCGGGACAACGACACCATACTGCATGGCTAACGTCACCGGAGGTGA GGGGTTAGGAGGCGCGCCCCTGCAAGTGTTGTGTATCCGCCCTTTTTTTC GTGACTCAGTGCATGCCACACATGCATCGTTTTCTTCATTCAGTTCCTGC CGTTCCTCATTTCTCTTCGGCGGTCTCTGCGTTTTTTTCCACCCGTCATA TCCCTCCATCACAAAGCATTTATACCTTATTTTTATTCAAACGCTCATTC CTTCTCAACGTAGGGGCAAAACACGCCAACAAGGCTGCAGGGCCGCTCAA GTGGCTACAGTCCGAGTGTTCCGATGGCTTCCAGGACGACCAGTTCTACG AAGCCACTGCGCATGCCGTTGACCTGCCGGTGACTATCCATCAAGGAGTA AGCCCGGAAACTTTGGAAGGAGGGACATGTGGTGTC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15002:290..1325+

>mRNA_H-canaliculatus_F_contig15002.3776.1 ID=mRNA_H-canaliculatus_F_contig15002.3776.1|Name=mRNA_H-canaliculatus_F_contig15002.3776.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1578bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15002:290..1325+ (Hapterophycus canaliculatus Oshoro5f female)
ATGAAGACGCTGCCGAAGAAGATCGTTGAGTGTTTGATGGGCAAGATGGC
GCCGACTGCGCAGGGGAGGGAAGAGGCCGTCATGGAATTCGAGCGAGAGT
ATATCCAGCCATCTCGGACGGCCCGGGATAGACAGAGAGAGCTCGTAGTG
AAACGCGTGCCGGCCATCGAAAAAGCGACCGCGGCTTTGAAGGAAGGCCC
AGGGTTCAAGGGCGAGTCGGGGAAGGGGCGAGTTTTGTCACTGGACGGGA
GAGAGTGGCCGCCGGCGCGCTGGGAGGACATGCTCGGGGCCGCAGACAAG
GGAGTGGCCGCAATGCGGGAAGTGGTCGCGTACTACGTTCTGGGAGAGAA
GGGAAGGCAAAAGACGAGCAAGAAGAGTATTTTTTCGATACCTCCTGTCA
ACAAACAGAACAAAGCAACGAAGAGTAAGGGAAGGGAGTCGGCGCTCAAG
GACACTATCGGAGACGCCTTCGCGGCGGGACAAGAGCTCAAGGCCATGAT
GTTGAAAGTCTTCAACGCCGTTGGGGAGGGAGGGAGTATTGGCCAAGAGC
AGCCAGTAAAGATGTCTGCTGATATCGGGACAACGACACCATACTGCATG
GCTAACGTCACCGGAGATGAAGACGCTGCCGAAGAAGATCGTTGAGTGTT
TGATGGGCAAGATGGCGCCGACTGCGCAGGGGAGGGAAGAGGCCGTCATG
GAATTCGAGCGAGAGTATATCCAGCCATCTCGGACGGCCCGGGATAGACA
GAGAGAGCTCGTAGTGAAACGCGTGCCGGCCATCGAAAAAGCGACCGCGG
CTTTGAAGGAAGGCCCAGGGTTCAAGGGCGAGTCGGGGAAGGGGCGAGTT
TTGTCACTGGACGGGAGAGAGTGGCCGCCGGCGCGCTGGGAGGACATGCT
CGGGGCCGCAGACAAGGGAGTGGCCGCAATGCGGGAAGTGGTCGCGTACT
ACGTTCTGGGAGAGAAGGGAAGGCAAAAGACGAGCAAGAAGAGTATTTTT
TCGATACCTCCTGTCAACAAACAGAACAAAGCAACGAAGAGTAAGGGAAG
GGAGTCGGCGCTCAAGGACACTATCGGAGACGCCTTCGCGGCGGGACAAG
AGCTCAAGGCCATGATGTTGAAAGTCTTCAACGCCGTTGGGGAGGGAGGG
AGTATTGGCCAAGAGCAGCCAGTAAAGATGTCTGCTGATATCGGGACAAC
GACACCATACTGCATGGCTAACGTCACCGGAGGGGCAAAACACGCCAACA
AGGCTGCAGGGCCGCTCAAGTGGCTACAGTCCGAGTGTTCCGATGGCTTC
CAGGACGACCAGTTCTACGAAGCCACTGCGCATGCCGTTGACCTGCCGGT
GACTATCCATCAAGGAGTAAGCCCGGAAACTTTGGAAGGAGGGACATGTG
GTGTCGGGCAAAACACGCCAACAAGGCTGCAGGGCCGCTCAAGTGGCTAC
AGTCCGAGTGTTCCGATGGCTTCCAGGACGACCAGTTCTACGAAGCCACT
GCGCATGCCGTTGACCTGCCGGTGACTATCCATCAAGGAGTAAGCCCGGA
AACTTTGGAAGGAGGGACATGTGGTGTC
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