mRNA_H-canaliculatus_F_contig150.3766.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Match: A0A6H5KEX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX8_9PHAE) HSP 1 Score: 439 bits (1129), Expect = 8.560e-149 Identity = 237/324 (73.15%), Postives = 267/324 (82.41%), Query Frame = 1
Query: 130 MTTARLAFTSAAVKWSHMSTGGSQRTYSTRTKRLVTMSSGPEVVCLDCTGTIMRIKGSIPRLYLGVLEERLGVAEGGLPGTVSEDGLLRAFGTSLKRRSKELPCFGAGVMSSEEWWAEVVLATFRGAGVSDKTLGLHG----GGTGXXXXXXXXRRIFDDVFDRLFHEVFTSTAAWELVPGAEQVLEGLRDWCREDGGPKALGAISNFDERLHPLLRNLGVYDSFDFVLTSRECGSEKPEPGLFVEALKRAAAGRSDDRGGGDGSGDGRGVIVGDTFRTDVLGARSVGWDAVLITKGKSPAGEDERENERFRRVDDLKGVLAAL 1089
M +RLA S+AVKWSH+ T T+RL+TM +GP+VVCLDCTGTIMRIKGS+PRLYLGVLE+RLGV+EGGLP VSE LL +F SLKRRSKELPCFG GVMSSE+WWAEVV+ATFRGAGVSD+TLG+ GG XXXXXXXX R+FDDVFDRLFH+VFTST AWELVPGAE+VLE LR W E GGP+ALGA+SNFDERLHPLL+NLGVY+SFDFVLTSRECGSEKPEP +F EALKRA + GGGDG DGRGVIVGDTFRTDVLGARSVGWDAVLIT+GK PA E+E++ + RVDDL+GV AAL
Sbjct: 1 MLGSRLASASSAVKWSHLPV----ITPPPSTRRLLTMRAGPDVVCLDCTGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLNSFRASLKRRSKELPCFGTGVMSSEDWWAEVVMATFRGAGVSDETLGISQEGDRGGGXXXXXXXXXGRVFDDVFDRLFHDVFTSTTAWELVPGAEEVLEDLRAWVGEAGGPRALGAVSNFDERLHPLLKNLGVYESFDFVLTSRECGSEKPEPHMFHEALKRAGS-----SGGGDG--DGRGVIVGDTFRTDVLGARSVGWDAVLITRGKDPATEEEQDTTHYARVDDLRGVPAAL 313
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Match: A0A7S2STH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STH1_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.080e-33 Identity = 104/285 (36.49%), Postives = 136/285 (47.72%), Query Frame = 1
Query: 250 PEVVCLDCTGTIMRIKGSIPRLYLGVLEERLGVAEGGLPGTVSEDGLLRAFGTSLKRRSKELPCFGAGV-MSSEEWWAEVVLATFRGAGVSDKTLGLHGGGTGXXXXXXXXRRIFDDVFDRLFHEVFTSTAAWELVPGAEQVLEGLRDW--CREDGGPKALGAISNFDERLHPLLRNLGVYDSFDFVLTSRECGSEKPEPGLFVEALKRAAAGRSDDRGGGDGSGDGRGVIVGDTFRTDVLGARSVGWDAVLITKGKSPAGEDERENE-----RFRRVDDLKGVL 1080
P VV D TGT+M++ + Y L + G+ LP S D AF K +S+E PCFG G M S +WW VV T+ GV +K L + ++FD L+ VF + WEL A VL+ L + R + P LG ISNFDERLH LL NLG+ FD VLTS+EC EKP +F AL R DR R V +GDTF DV GA GW+A+ + ++P + ++ F+RV DL VL
Sbjct: 101 PRVVTFDATGTLMQLTEPVGMHYREALLQASGLR---LP---SPDHFDAAFKEVYKAQSEEFPCFGCGAAMPSRDWWYPVVRDTYLKTGVPEKILDP----------------LLPEIFDSLYDNVFAGSEGWELNEQAIYVLDTLIELKESRAEDDPLYLGVISNFDERLHKLLDNLGIAHYFDIVLTSKECCVEKPNSPIFDMALSRLGI---YDRS--------RAVHIGDTFDKDVAGAARAGWNAIFV---RAPPYRMKNVDDLPCDIEFQRVGDLSHVL 349
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Match: A0A8J5XU42_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XU42_DIALT) HSP 1 Score: 139 bits (350), Expect = 3.580e-33 Identity = 97/267 (36.33%), Postives = 129/267 (48.31%), Query Frame = 1
Query: 232 VTMSSGPEVVCLDCTGTIMRIKGSIPRLYLGVLEERLGVAEGGLPGTVSEDGLL----------RAFGTSLKRRSKELPCFGAGVMSSEEWWAEVVLATFRGAGVSDKTLGLHGGGTGXXXXXXXXRRIFDDVFDRLFHEVFTSTAAWELVPGAEQVLEGLRDWCRE-DGGPKALGAISNFDERLHPLLRNLGVYDSFDFVLTSRECGSEKPEPGLFVEALKRAAAGRSDDRGGGDGSGDGRGVIVGDTFRTDVLGARSVGWDAVLI 999
V ++ P +V D TGT+MR++ + +Y L L ++ +S L RAFG + + PCFGAG +SS +WW+ VV F GAGVS+ + R +F L+ E F STA WEL+ + V++ L W + G +G ISNFD+RL LL +LG+ FDFVLTSRE G EKP +F A +RA D V VGDTF TDVLGA GW AV +
Sbjct: 4 VVAATRPRLVTFDATGTLMRVQRPVGAIYRDALISSLSASKLARTADLSAAELAACNVDPVAIGRAFGRAYAAQCAAHPCFGAGSLSSRDWWSSVVREAFVGAGVSEAVV----------------RAEMPLLFPTLY-ESFASTATWELLDASAGVVQQLARWRAQLPPGELTIGVISNFDDRLPALLNSLGLGRYFDFVLTSREHGDEKPCRSIFERASERAGLATVD-------VSPRTCVHVGDTFGTDVLGASRAGWRAVFV 246
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Match: A0A7S2PCP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCP1_9STRA) HSP 1 Score: 140 bits (352), Expect = 7.120e-33 Identity = 94/251 (37.45%), Postives = 128/251 (51.00%), Query Frame = 1
Query: 250 PEVVCLDCTGTIMRIKGSIPRLYLGVLEERLGVAEGGLPGTVSEDGLLRAFGTSLKRRSKELPCFGAGV-MSSEEWWAEVVLATFRGAGVSDKTLGLHGGGTGXXXXXXXXRRIFDDVFDRLFHEVFTSTAAWELVPGAEQVLEGLRDWCREDGGPKALGAISNFDERLHPLLRNLGVYDSFDFVLTSRECGSEKPEPGLFVEALKRAAAGRSDDRGGGDGSGDGRGVIVGDTFRTDVLGARSVGWDAVLI 999
P+++ D T T++++K + Y +L E LP AF + +++ PCFG G+ M+S EWWAE T+ D GL G + D V + L+++VF ST AWEL PG L + W RE+GGP+ L +SNFDERLH +L +GV D+FDFVLTSRE GSEKP F A+ RA D S + VGD F +DV+GA + GW +V I
Sbjct: 89 PQLITFDATDTLIQLKSEVGMTYRLILHEATRFRSR-LPTPAV---FTSAFNQAFTETNEKYPCFGCGLGMTSREWWAECTKRTYALVEHIDYERGLRDRMDGP---------LGDAVAEVLYNQVFASTEAWELKPGVLDALSRFKMW-REEGGPQ-LAVLSNFDERLHSILDQVGVADAFDFVLTSREIGSEKPNRSAFEVAMSRAGV--------ADPS---LCMHVGDGFDSDVVGASNAGWHSVWI 313
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Match: A0A7S2G2K6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2K6_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.250e-32 Identity = 96/281 (34.16%), Postives = 135/281 (48.04%), Query Frame = 1
Query: 250 PEVVCLDCTGTIMRIKGSIPRLYLGVLEERLGVAEGGLPGTVSEDGLLRAFGTSLKRRSKELPCFGAG-VMSSEEWWAEVVLATFRGAGVSDKTLGLHGGGTGXXXXXXXXRRIFDDVFDRLFHEVFTSTAAWELVPGAEQVLEGLRDWCREDGGPKALGAISNFDERLHPLLRNLGVYDSFDFVLTSRECGSEKPEPGLFVEALKRAAAGRSDDRGGGDGSGDGRGVIVGDTFRTDVLGARSVGWDAVLITKGKSPAGED---ERENERFRRVDDLKGVL 1080
P+++ D TGT++++ + Y VL + G+ LP D AF + + PCFG +S+++WWA VV T+ GV + +F +FD L+HEVFT T WEL VL+ L++W GP+ LG ISNFDERL LL LG+ D FD ++TS+ECG EKP +F AL R D V VG+ + TDV GA + GW+A+ + K PA + + + F V DL VL
Sbjct: 91 PQLITFDATGTLIQLAEPVGMHYRQVLMKHTGIR---LP---RPDIFTDAFKEVYDAKCQASPCFGCSDSISAQDWWASVVRDTYTKVGVPSDIIDP----------------LFPLLFDELYHEVFTGTDGWELNADTMMVLDKLKEWQETGDGPR-LGVISNFDERLPKLLEALGIADYFDIIITSKECGMEKPCRQIFDIALTRLGIYERD-----------AAVHVGNDYDTDVKGATAAGWNALYV---KEPAYTNLPAQTTDTPFTVVGDLGKVL 334
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Match: A0A835YZN2_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN2_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.290e-26 Identity = 92/289 (31.83%), Postives = 134/289 (46.37%), Query Frame = 1
Query: 181 MSTGGSQRTYSTRTKRL-VTMSSGPEVVCLDCTGTIMRI---KGSIPRLYLGVLEERLGVAEG---GLPGTVSEDGLLRAFGTSLKRRSKELPCFGAGV-MSSEEWWAEVVLATFRGAGVSDKTLGLHGGGTGXXXXXXXXRRIFDDVFDRLFHEVFTSTAAWELVPGAEQVLEGLRDWCREDGGPKALGAISNFDERLHPLLRNLGVYDSFDFVLTSRECGSEKPEPGLFVEALKRAAAGRSDDRGGGDGSGDGRGVIVGDTFRTDVLGARSVGWDAVLITKGKSPAG 1023
M+ GG+ R + L V + P+++ D GT++++ KG I L E L A G LPG A+ +L + PC+G G ++S +WW VV +TL H + +++FD LF+E FT A+EL P A + LE L +W RE G LG ++N DERL +L NLG+ + FDFVLTSR+ GSE P +F AL +A + + + GD D+ GA + GW + LI +P G
Sbjct: 1 MAPGGAGRLVRAGVQELAVPLPPAPKLITFDAEGTLLQLASPKGLI-------LRESLLKAHGYLARLPGPDLFQASHAAYDKALNAATAAQPCYGCGTGVTSHQWWYGVVYDALV------ETLEAHN-----IPPSEMVDPVMEELFDELFYETFTGPEAYELRPDAARTLEKLAEW-REAGTGPLLGIVTNADERLPTVLLNLGILEVFDFVLTSRQIGSELPARAIFDVALDKAGLTNAAEA-----------LHCGDDLERDIGGAAAAGWQSCLIANPPAPQG 259
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Match: A0A7R9U3B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3B9_9STRA) HSP 1 Score: 123 bits (308), Expect = 3.260e-26 Identity = 94/280 (33.57%), Postives = 130/280 (46.43%), Query Frame = 1
Query: 250 PEVVCLDCTGTIMRIKGSIPRLYLGVLEERLGVAEGGLPGTVSEDGLLRAFGTSLKRRSKELPCFGAGV-MSSEEWWAEVVLAT----FRGAGVSDKTLGLHGGGTGXXXXXXXXRRIFDDVFDRLFHEVFTS---TAAWELVPGAEQVLEGLRDWCREDGGPKALGAISNFDERLHPLLRNLGVYDSFDFVLTSRECGSEKPEPGLFVEALKRAAAGRSDDRGGGDGSGDGRGVI-VGDTFRTDVLGARSVGWDAVLITKGKSPAGEDERENERFRRVD 1062
P+++ D TGT+M+++ I +Y L E P S AF + + K +PCFG G ++S +WW V+ T F GV+D+ + GG + + +F L+ +F WEL PG E VL+ LR E G LG +SNFD+RL +L +LG+ FDFVLTSRE G EKP +F L R A G S D G G + R + GDT TDV GA GW + I+ + + E R D
Sbjct: 278 PKLITFDATGTLMQLRSHIGVIYRDTLLEHATTLRLPRPDVFSI-----AFKEAYASQCKAMPCFGCGSGIASFDWWRPVMQGTYDSVFSSFGVTDEEVAEAGG-------MESKEEVMEMLFQDLYFNIFAKGPPEGMWELRPGVEAVLQNLRS--AESCGGLRLGVLSNFDDRLPGILESLGIAKYFDFVLTSREAGQEKPSQVMFD--LARNALGLSAD---GSGPIETRECLHAGDTLGTDVRGALDAGWQSAFISDIATVLDNEANPKEGMPRKD 538
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Match: A0A8C4PXL1_EPTBU (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4PXL1_EPTBU) HSP 1 Score: 110 bits (274), Expect = 1.380e-23 Identity = 91/292 (31.16%), Postives = 132/292 (45.21%), Query Frame = 1
Query: 241 SSGPEVVCLDCTGTIMRIKGSIPRLY--LGVLEERLGVAEGGLPGTVSEDGLLRAFGTSLKRRSKELPCFG---AGVMSSEEWWAEVVLATFRGAGVSDKTLGLHGGGTGXXXXXXXXRRIFDDVFDRLFHEVFTSTAAWELVPGAEQVLEGLRDWCREDGGPKALGAISNFDERLHPLLRNLGVYDSFDFVLTSRECGSEKPEPGLFVEALKRAAAGRSDDRGGGDGSGDGRGVIVGDTFRTDVLGARSVGWDAVLITKGKSPAGEDER--ENERFRRVDDLKGVLAALAT 1095
S ++ D TGT++R++GS+ Y G+L G+A P S L AF + +S+ PC+G AG + WWA VV TF GV D L + + D L+HE+ WE+ L WC+ G LG +SNFD+RL+ +L +G+ FDFVLTS E G++KP+P +F ALK G+ V +GD TD LGA S G A L+ + K+ + + +DDL +L A++T
Sbjct: 3 SQSVRLITWDATGTLLRVRGSVGEQYKAAGLL---FGLAS---PRVTS---LNAAFREAYAHQSRLKPCYGSTCAGKSGANRWWASVVQETFNRCGVRDPPLIMK-------------------IADYLYHEM-KRPDRWEVFGDVHPTLS----WCKTQGF--RLGVLSNFDKRLNDILSGVGLRSYFDFVLTSDEMGTQKPQPEVFHLALKHTGVQA------------GQAVHIGDDPVTDYLGATSSGMAAFLLKRNKAAELKSILIPPHRILDSLDDLPPLLKAVST 247
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Match: A0A2P6N2V2_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N2V2_9EUKA) HSP 1 Score: 109 bits (273), Expect = 4.030e-23 Identity = 90/301 (29.90%), Postives = 142/301 (47.18%), Query Frame = 1
Query: 268 DCTGTIMRIKGSIPRLYLGVLEERLGVA--------------EGGLPGTVSE------DGLLRAFGTSLKRRSKELPCFGA-GVMSSEEWWAEVVLATFRGAGVSDKTLGLHGGGTGXXXXXXXXRRIFDDVFDRLFHEVFTSTAAWELVPGAEQVLEGLRDWCREDGGPKALGAISNFDERLHPLLRNLGVYDSFDFVLTSRECGSEKPEPGLFVEALKRAAAGRSDDRGGGDGSGDGRGVIVGDTFRTDVLGARSVGWDAVLITKGKSPAGEDERENERFRRVDDLKGVLAALATFGKR 1107
D GT+ I+G + R Y R GVA + GT ++ D L +F + K+ + P FG+ + S++WW EVV T+RGA + D L+ + F+S ++L P + VL +R+ R D ++G I+N DER+H +L +LG++ FDFVL SRE G KP+P ++ EA + + S + + VGD + D LGA+ +G +A+L+T+G+ E+ERE+ R + DL + +TFGKR
Sbjct: 12 DGMGTLFEIRGGVGRFYAREAR-RHGVALRTEMSHKPERMFFKNPYDGTSTKQNIEAPDELRDSFYRAYKQADAKWPNFGSENNVESKQWWKEVVYNTYRGA---------------DYLTSKEEEETLSKMSDSLYSQ-FSSVEGYKLFPETKAVLADVRE--RVD----SIGLITNTDERIHQVLESLGIHHLFDFVLCSREFGKRKPDPSIYTEACRLSKHHPS------------QVMHVGDHYEKDFLGAKGIGMEALLVTRGQDM--EEEREDLRGLIIPDL---MPLHSTFGKR 272
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Match: L8GZ50_ACACA (HAD hydrolase, REG2-like, family IA subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZ50_ACACA) HSP 1 Score: 105 bits (261), Expect = 1.210e-21 Identity = 89/295 (30.17%), Postives = 131/295 (44.41%), Query Frame = 1
Query: 238 MSSGPEVVCLDCTGTIMRIKGSIPRLYLGVLEERLGVAEGGLPGTVSEDGLLRAFGTSLKRRSKELPCFGAGV-MSSEEWWAEVVLATFRGAGVSDKTLGLHGGGTGXXXXXXXXRRIFDDVFDRLFHEVFTSTAAWELVPGAEQVLEGLRDWCREDGGPKALGAISNFDERLHPLLRNLGVYDSFDFVLTSRECGSEKPEPGLFVEALKRAAAGRSDDRGGGDGSGDGRGVIVGDTFRTDVLGARSVGWDAVLITKGKSPAGEDERENERFRRVDDLKGVLAALATFGKR*RQI 1119
M P++V LD TGT+ R++GS+ Y E GV G P + L R F + + + P FG G +SS WW+ + AT A +F +FD+++H+ FT AWE+ P E V++ LR G K + +SNFDERL LL+NLG+ FD VL S G KP+P +F +AL++A S+ V VGD ++ D GA+ G + + A E + + +L +L AL G Q+
Sbjct: 1 MQVRPKLVSLDATGTLFRVRGSVGEAYARAAEA-FGV-HGLRPAS-----LTRGFFAAWRDHNVRHPNFGHGTELSSYNWWSSLFGATLAHARPE------------LSHSEEFAADVFPKLFDQVWHD-FTRAEAWEVFPETEPVIKTLRS-----NGIK-VAVVSNFDERLPLLLKNLGLDHLFDVVLPSCYAGVAKPDPDIFYQALRKANVEGSE------------AVHVGDDYKKDYRGAKDAGLSRAFLMCRDAVALEKAAQVPPADILHNLSDLLPALGLQGPTLAQL 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig150.3766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig150.3766.1 >prot_H-canaliculatus_F_contig150.3766.1 ID=prot_H-canaliculatus_F_contig150.3766.1|Name=mRNA_H-canaliculatus_F_contig150.3766.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=327bp MTTARLAFTSAAVKWSHMSTGGSQRTYSTRTKRLVTMSSGPEVVCLDCTGback to top mRNA from alignment at H-canaliculatus_F_contig150:25773..29279- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig150.3766.1 ID=mRNA_H-canaliculatus_F_contig150.3766.1|Name=mRNA_H-canaliculatus_F_contig150.3766.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3507bp|location=Sequence derived from alignment at H-canaliculatus_F_contig150:25773..29279- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig150:25773..29279- >mRNA_H-canaliculatus_F_contig150.3766.1 ID=mRNA_H-canaliculatus_F_contig150.3766.1|Name=mRNA_H-canaliculatus_F_contig150.3766.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1962bp|location=Sequence derived from alignment at H-canaliculatus_F_contig150:25773..29279- (Hapterophycus canaliculatus Oshoro5f female)back to top |