prot_H-canaliculatus_F_contig15.3762.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15.3762.1
Unique Nameprot_H-canaliculatus_F_contig15.3762.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length1199
Homology
BLAST of mRNA_H-canaliculatus_F_contig15.3762.1 vs. uniprot
Match: D7FYS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS2_ECTSI)

HSP 1 Score: 450 bits (1158), Expect = 1.220e-139
Identity = 263/452 (58.19%), Postives = 319/452 (70.58%), Query Frame = 0
Query:  446 MKTKLGDFEGTRYARSKLKLTVSHEWAQQEYRTGIASSGRVSVRITETEFIRRRLGGGSLYAMLEQESRDYLRVGPFTDADMELLGKSFAEVQAHKELPP-RATPTSDMAAAASSKATGTSKDKASTAPTMKTGKA----GGGKAAAIAAAGAKDAAAGAADSGSISWADRLRDFQIDLPASTSFSGLAPDSADEDSLAAGVGKGXXXXXXGSSLDAGEVELQGGGKDDDPLAWDGVGVDPLTVLHHRKHFDVRCREYEALNNSSKKDKTNVLMGRTHTIHQEHTSIISAKRGTLEGTLQNVRQQLNGREEQLRHVHIDQRAVNPLDTAVVARLNENAAMMRTRVAEKKVQMAMIMDEANKVLQWEQTKELARREAINHAAEMHGHGGSFTAGASRERNELMQCLVAQKANIMLLSTFCKLRGPWLAPPEYVEAGRPMPATAATASSAETED 892
            MKT L +F+GTRYARS+LK T++HEWA+QEYRTGIA  G+V   +TE EF+RRR+ GGSLYA+LEQESRDYLRVGPFTDAD+ELLG SFA+ QA KELPP  A P  D                                  GK AA A AGA      AA+ G  SWADRLRDFQID+PAS ++ GLA DS+         G G      G  + A   +  G  ++DD  AWDG+GVD  TV+ HR+ FD+RCR YEALN +S+ DKTN L+ +TH + Q+H +I++AKR TLEGTLQNVRQQLNGRE+QLRHVH++QR VNPLDT VVA LNE+ A + TRVAEKKVQMAMI+DEANKV+QWEQT ELARREA++HAA+MHGHGG F  G+++ERNEL+Q +++QK NIMLLSTFCKLRGPWLAP  YV   R +   AA ++ A  E+
Sbjct:    1 MKTVLPEFQGTRYARSRLKQTLAHEWARQEYRTGIAL-GQVDRGMTEMEFVRRRVEGGSLYALLEQESRDYLRVGPFTDADVELLGMSFAQAQASKELPPPAAAPKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGKDAAAAKAGA------AAEGGVASWADRLRDFQIDIPASATYDGLASDSS--------RGGGAADRTDGQVV-AEAAQKGGSQQEDDASAWDGIGVDAATVIRHRRQFDLRCRAYEALNTASRNDKTNGLLEKTHRLRQDHAAIVAAKRVTLEGTLQNVRQQLNGREDQLRHVHMEQRGVNPLDTTVVAGLNESEAAIMTRVAEKKVQMAMIIDEANKVVQWEQTAELARREAMHHAADMHGHGGGFAPGSAKERNELVQSMMSQKVNIMLLSTFCKLRGPWLAPSGYVRGKRSVSDGAAGSAVAAAEE 436          
BLAST of mRNA_H-canaliculatus_F_contig15.3762.1 vs. uniprot
Match: D7FYS1_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS1_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 2.690e-27
Identity = 62/83 (74.70%), Postives = 70/83 (84.34%), Query Frame = 0
Query:    1 MVLKHAQLHGEKRLKSGAYLHALAED-SLAQEAGLVPRDRLVLVEGLDVKMLPFDRIVGLIRRADFPLTLVWSRERAAGQAVS 82
            MVLKHAQ+ GE+RLK GAYL  LAE  SLAQ+ GL P+DRL+LVEGLDVK LPFDRIVGLIR+A FPLTLVWSR+R AG A +
Sbjct:    1 MVLKHAQVFGEERLKRGAYLAGLAEGPSLAQDLGLSPKDRLILVEGLDVKTLPFDRIVGLIRKATFPLTLVWSRQRKAGIAAT 83          
BLAST of mRNA_H-canaliculatus_F_contig15.3762.1 vs. uniprot
Match: A0A6H5KV99_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV99_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 8.940e-15
Identity = 48/72 (66.67%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 MVLKHAQLHGEKRLKSGAYLHALAED-SLAQEAGLVPRDRLVLVEGLDVKMLPFDRIVGLIRRADFPLTLVW 71
            MVLKHAQ+ GE+RLK GAYL  LAE  SLAQ+ GL P+DRL+LVEGLDVK LPFDRI G  R  D   T V+
Sbjct:   42 MVLKHAQVCGEERLKRGAYLAGLAEGPSLAQDLGLSPKDRLILVEGLDVKTLPFDRI-GERRATDSSRTRVY 112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15.3762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYS2_ECTSI1.220e-13958.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FYS1_ECTSI2.690e-2774.70PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KV99_9PHAE8.940e-1566.67PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.42.10coord: 5..86
e-value: 4.4E-7
score: 31.6
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 10..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15contigH-canaliculatus_F_contig15:62454..72419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15.3762.1mRNA_H-canaliculatus_F_contig15.3762.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15 61328..73626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15.3762.1 ID=prot_H-canaliculatus_F_contig15.3762.1|Name=mRNA_H-canaliculatus_F_contig15.3762.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1199bp
MVLKHAQLHGEKRLKSGAYLHALAEDSLAQEAGLVPRDRLVLVEGLDVKM
LPFDRIVGLIRRADFPLTLVWSRERAAGQAVSVSLTACTHRAVAFLYRHG
PSPPNSDGSSASGGSTSGKTTATNATATSEGDAASPAASAGAEDWAQATH
RSRPASTVSREAEAEVGGGAEETCEGNVRLSSNSSSGLRQQQQQMQRAPI
GEPMEAGLERDQAGKHDVPPRRHDEEQVQERQRRKGAAVGSMRPKRRRSS
PQQQQQQQQVMEGDDDTGAGAIGSRSRSSSSSSNGMGSDGPADALAAAEA
RASGEAIKTEQGAEAPNSRRREDGSAGLAEGLRREDGIADGTSGGGGDAS
SNSNIKSQVHQDAPSESANGKSGRVAGRGGGRGKGSRRGRGAVRGGRSRG
RGSGAAATAAGNAVDPAAAAAAAAGAASGEVGMEGVAPPDWLGPLMKTKL
GDFEGTRYARSKLKLTVSHEWAQQEYRTGIASSGRVSVRITETEFIRRRL
GGGSLYAMLEQESRDYLRVGPFTDADMELLGKSFAEVQAHKELPPRATPT
SDMAAAASSKATGTSKDKASTAPTMKTGKAGGGKAAAIAAAGAKDAAAGA
ADSGSISWADRLRDFQIDLPASTSFSGLAPDSADEDSLAAGVGKGGGKGG
GGSSLDAGEVELQGGGKDDDPLAWDGVGVDPLTVLHHRKHFDVRCREYEA
LNNSSKKDKTNVLMGRTHTIHQEHTSIISAKRGTLEGTLQNVRQQLNGRE
EQLRHVHIDQRAVNPLDTAVVARLNENAAMMRTRVAEKKVQMAMIMDEAN
KVLQWEQTKELARREAINHAAEMHGHGGSFTAGASRERNELMQCLVAQKA
NIMLLSTFCKLRGPWLAPPEYVEAGRPMPATAATASSAETEDSAGFEANT
GKAPAVVEHGDTAAAAAASLAVAVTRERGGTRRSSATGDRETGCESNESN
SDSPTNAARGSDAGSVTAAAAAAAAGTGAGAGAKSGKRPIKLRLLPPSGG
DRAKMVTGGDQEVSPRSAVSSSRAASVAAAVHSAGKEAASTFSAAEARGN
EGQGCADGGDGGDSAALTDAEASMTGPAASESVGRSGQGKEGGGGAGGGG
GRLPEAGNLSPVVPPGTASAEPPARAGGLSDEIAAAVPSSQKTMAGGGSG
GGGGEGEDLACDVDMVGDVARGCDGMDVDTEVDEWQVGTVLGEVASAD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf