prot_H-canaliculatus_F_contig15.3755.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15.3755.1
Unique Nameprot_H-canaliculatus_F_contig15.3755.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length212
Homology
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Match: A0A6H5LB71_9PHAE (PC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB71_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 7.900e-50
Identity = 113/210 (53.81%), Postives = 138/210 (65.71%), Query Frame = 0
Query:    1 MQRLGSSVRM--CRNINIRSSCGRCFST-SSGPEHDDYWAAAKTEAQATPAYQQAASAAASNPAP-PPAPDVDQWATPGNYTPSTRRMPMGDAYGPSATSRVHEGRSMPPSQYTNTSTQLNRQS------EPAFDMESSMHLSPVKQVDVRSFMGQTLVDIRQYFVSPGGATLPSKKGISLTVAQWRRLQAAMGEIDHDI-QLKEQYSGM 199
            MQR G S R     ++ I SS  R  S+ SSGPEHDD+W AAKTEAQATPAYQQAA A A+ P P  P    D+WA PG  +P T  MPMG+AY PS++S+++ GRS   S    +S   N  S       P FDM+SS HLSPV+QVDVRSF G+ LVDIRQYF    G  +P+KKGI+LT+ QWRRLQ AM +ID +I  L+EQ   +
Sbjct:    1 MQRFGVSARRRGFPSLLIHSSSSRKLSSFSSGPEHDDFWTAAKTEAQATPAYQQAA-ANATAPTPWTPTATGDRWAQPGGPSPGT--MPMGEAYKPSSSSKMYGGRSS--SSNGRSSNTFNSDSGDFVPPPPTFDMQSSTHLSPVRQVDVRSFKGRPLVDIRQYFRGAEGQAVPTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSL 205          
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Match: D7FYS7_ECTSI (PC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS7_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.300e-19
Identity = 45/75 (60.00%), Postives = 55/75 (73.33%), Query Frame = 0
Query:  126 MESSMHLSPVKQVDVRSFMGQTLVDIRQYFVSPGGATLPSKKGISLTVAQWRRLQAAMGEIDHDI-QLKEQYSGM 199
            M+SSMHLSPV+Q DVR F G+ LVDIRQYF    G   P+KKGI+LT+ QWRRLQ AM +ID +I  L+EQ   +
Sbjct:    1 MQSSMHLSPVRQADVRLFKGRPLVDIRQYFRGAEGQAAPTKKGIALTIPQWRRLQEAMADIDKEIFALEEQQRSL 75          
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Match: A8D8C5_ARTSF (RNA polymerase II transcriptional coactivator n=1 Tax=Artemia franciscana TaxID=6661 RepID=A8D8C5_ARTSF)

HSP 1 Score: 64.7 bits (156), Expect = 4.090e-10
Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 0
Query:  125 DMESSMHLSPVKQVDVRSFMGQTLVDIRQYFVSPGGATLPSKKGISLTVAQWRRLQAAMGEIDHDI 190
            D E +  L   + + VRSF G+T VDIR+Y+    G  +P KKGISL+V QW+++Q AM E+D  +
Sbjct:   40 DEEPTWTLDKKRFLKVRSFKGKTFVDIREYYEDASGNLMPGKKGISLSVQQWKKVQEAMDEVDEAL 105          
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Match: A0A1X7U2Q5_AMPQE (PC4 domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U2Q5_AMPQE)

HSP 1 Score: 63.9 bits (154), Expect = 8.780e-10
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0
Query:  125 DMESSMHLSPVKQVDVRSFMGQTLVDIRQYFVSPGGATLPSKKGISLTVAQWRRLQAAMGEIDHDI 190
            D E  + LS  + V+VR+F G+ ++DIR+Y+V+  G   P KKGISL+V QW +L+ AM  ID  I
Sbjct:   44 DTEELIPLSAKRFVNVRTFKGRIMIDIREYYVNDDGENRPGKKGISLSVDQWEKLKEAMETIDERI 109          
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Match: A0A2G8JPM7_STIJA (Activated RNA polymerase II transcriptional coactivator p15 n=2 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JPM7_STIJA)

HSP 1 Score: 62.4 bits (150), Expect = 3.410e-9
Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 0
Query:  125 DMESSMHLSPVKQVDVRSFMGQTLVDIRQYFVSPGGATLPSKKGISLTVAQWRRLQAAMGEIDHDI 190
            D E    LS  K V+VR F G+ L+DIR+Y+   GG   P KKGISLTV QWR+L+  + EI+  I
Sbjct:   45 DQEHMYALSRQKFVNVREFRGRILIDIREYY-DAGGEMKPGKKGISLTVEQWRKLEEKVDEINDSI 109          
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Match: A0A7M7G0M9_STRPU (PC4 domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7G0M9_STRPU)

HSP 1 Score: 62.0 bits (149), Expect = 4.990e-9
Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 0
Query:  125 DMESSMHLSPVKQVDVRSFMGQTLVDIRQYFVSPGGATLPSKKGISLTVAQWRRLQAAMGEIDHDIQ 191
            D      LS  + V+VR F G+ L+DIR+Y+    G  LP KKGISLTV QWR+L + + +ID  I+
Sbjct:   46 DTSEMFSLSRQRFVNVREFRGKVLIDIREYYEKEVGDLLPGKKGISLTVDQWRKLVSQVDDIDSRIE 112          
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Match: A0A4S4L2N3_9AGAM (PC4 domain-containing protein (Fragment) n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L2N3_9AGAM)

HSP 1 Score: 64.3 bits (155), Expect = 6.010e-9
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 0
Query:  124 FDMESSMHLSPVKQVDVRSFMGQTLVDIRQYFVSPGGATLPSKKGISLTVAQWRRLQAAMGEID 187
            +D E  + L   K++ VR+F GQTL+DIR+Y+  PG    P KKGISLTV QW+ L  +M  ID
Sbjct:  169 YDGEQFIDLGKKKRITVRNFKGQTLIDIREYYGDPGDEK-PGKKGISLTVEQWKNLTQSMPSID 231          
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Match: UPI001ED87873 (activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED87873)

HSP 1 Score: 61.6 bits (148), Expect = 6.040e-9
Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 0
Query:  129 SMHLSPVKQVDVRSFMGQTLVDIRQYFVSPGGATLPSKKGISLTVAQWRRLQAAMGEIDHDI 190
            S HL  +K   VR+F G+  VDIR+Y+ S G    P KKGISL+V QWRR++  M EID  I
Sbjct:   46 SWHLEKMKYAKVRTFQGKVYVDIREYYQSDGKMK-PGKKGISLSVDQWRRIKELMPEIDEAI 106          
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Match: A0A0U2TG75_ACAPC (Activated RNA polymerase II transcriptional coactivator p15 n=1 Tax=Acartia pacifica TaxID=335913 RepID=A0A0U2TG75_ACAPC)

HSP 1 Score: 59.7 bits (143), Expect = 3.820e-8
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0
Query:  127 ESSMHLSPVKQVDVRSFMGQTLVDIRQYFVSPGGA-TLPSKKGISLTVAQWRRLQAAMGEIDHDI 190
            + S HL   K V VRSF GQT +DIR+Y+V      T P KKGISL   Q+++L+  + EIDH +
Sbjct:   52 DPSWHLGRNKHVVVRSFKGQTYIDIREYYVDKNTMDTKPGKKGISLNCEQYQKLKTILDEIDHAL 116          
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Match: UPI001BB2BB0F (activated RNA polymerase II transcriptional coactivator p15-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2BB0F)

HSP 1 Score: 58.2 bits (139), Expect = 1.250e-7
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0
Query:  125 DMESSMHLSPVKQVDVRSFMGQTLVDIRQYFVSPGGATLPSKKGISLTVAQWRRLQAAMGEIDHDIQ 191
            D  +   LS  + V+VR F G+ L+DIR+Y+    G   P KKGISLTV QWR+L   + +ID  I+
Sbjct:   42 DTSNMFSLSRQRFVNVREFRGKVLIDIREYYEPEVGDLRPGKKGISLTVDQWRKLVNQIDDIDARIE 108          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15.3755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LB71_9PHAE7.900e-5053.81PC4 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYS7_ECTSI1.300e-1960.00PC4 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A8D8C5_ARTSF4.090e-1045.45RNA polymerase II transcriptional coactivator n=1 ... [more]
A0A1X7U2Q5_AMPQE8.780e-1046.97PC4 domain-containing protein n=1 Tax=Amphimedon q... [more]
A0A2G8JPM7_STIJA3.410e-950.00Activated RNA polymerase II transcriptional coacti... [more]
A0A7M7G0M9_STRPU4.990e-946.27PC4 domain-containing protein n=1 Tax=Strongylocen... [more]
A0A4S4L2N3_9AGAM6.010e-950.00PC4 domain-containing protein (Fragment) n=1 Tax=B... [more]
UPI001ED878736.040e-951.61activated RNA polymerase II transcriptional coacti... [more]
A0A0U2TG75_ACAPC3.820e-847.69Activated RNA polymerase II transcriptional coacti... [more]
UPI001BB2BB0F1.250e-744.78activated RNA polymerase II transcriptional coacti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003173Transcriptional coactivator p15 (PC4)PFAMPF02229PC4coord: 131..181
e-value: 9.9E-17
score: 60.3
IPR009044ssDNA-binding transcriptional regulatorGENE3D2.30.31.10coord: 128..193
e-value: 1.3E-19
score: 71.4
IPR009044ssDNA-binding transcriptional regulatorSUPERFAMILY54447ssDNA-binding transcriptional regulator domaincoord: 131..190
NoneNo IPR availablePANTHERPTHR13215:SF0ACTIVATED RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR P15coord: 104..194
NoneNo IPR availablePANTHERPTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORcoord: 104..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15contigH-canaliculatus_F_contig15:38178..38813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15.3755.1mRNA_H-canaliculatus_F_contig15.3755.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15 38111..39815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15.3755.1 ID=prot_H-canaliculatus_F_contig15.3755.1|Name=mRNA_H-canaliculatus_F_contig15.3755.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=212bp
MQRLGSSVRMCRNINIRSSCGRCFSTSSGPEHDDYWAAAKTEAQATPAYQ
QAASAAASNPAPPPAPDVDQWATPGNYTPSTRRMPMGDAYGPSATSRVHE
GRSMPPSQYTNTSTQLNRQSEPAFDMESSMHLSPVKQVDVRSFMGQTLVD
IRQYFVSPGGATLPSKKGISLTVAQWRRLQAAMGEIDHDIQLKEQYSGMD
QNGREKPGGQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009044ssDNA-bd_transcriptional_reg
IPR003173PC4