mRNA_H-canaliculatus_F_contig1485.3672.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE) HSP 1 Score: 162 bits (410), Expect = 1.950e-42 Identity = 100/219 (45.66%), Postives = 129/219 (58.90%), Query Frame = 1
Query: 19 ELSTLRSDAAVSVLRDTFAADLVVLVGSFSGTCGLGYVNFNTRIASAPYGFSLIDARCFDSKTTTHEIGHNLGCLHDLANNGLTAVNDYSHGMRYCTGSDTRFHTIMAYY---CAYNAPAGYVGDFVPGINYFSNPDVDYDGRVTGSATKNNARTVRENMEAVSKFRI-----------ACQDDADCTGQGTC-AGGICGYTECAAVGGNPNNSESGFC 630
EL L +++AV+ LR+ + DLV LVG F GTCGLGY+ FN +A +GFSL+ + CFD+ + THEI HN+GC HD N+ ++Y HG RYCTGSD + TIM+YY C P VP +NYFSNP+V Y + TG+AT +NAR + E+M AVS FR AC D DC G C + GIC ECA +GG+ E C
Sbjct: 426 ELDALAANSAVNDLRNEYQGDLVQLVGYFPGTCGLGYI-FN---GNAEFGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDNS--ETQDEYRHGYRYCTGSDP-YRTIMSYYQNGCG-GDPTPEADPIVPQVNYFSNPEVTYLNKPTGTATADNARCIEESMVAVSNFRADGDFICSDDGDACAVDIDCC-VGFCGSAGICATEECAGLGGDTATIEDMVC 635
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE) HSP 1 Score: 154 bits (390), Expect = 8.590e-40 Identity = 94/218 (43.12%), Postives = 123/218 (56.42%), Query Frame = 1
Query: 19 ELSTLRSDAAVSVLRDTFAADLVVLVGSFSGTCGLGYVNFNTRIASAPYGFSLIDARCFDSKTTTHEIGHNLGCLHDLANNGLTAVNDYSHGMRYCTGSDTRFHTIMAYY---CAYNAPAGYVGDFVPGINYFSNPDVDYDGRVTGSATKNNARTVRENMEAVSKFR----IACQDDAD-CTGQGTC------AGGICGYTECAAVGGNPNNSESGFC 630
EL L +++ V+ LR+ + DLV LVG F GTCGLGY+ FN A +GFSL+D+ CFD+ + THEI HN+GC HD N+ Y HG RYC G+D + TIM+YY C P VP +NYFSNP+V Y + TG+A +NAR + ++M AVS+FR C DD D CT C + GIC +C GG+ E C
Sbjct: 246 ELDALAANSNVTDLRNQYQGDLVQLVGYFPGTCGLGYI-FN---GDAAFGFSLVDSNCFDNFSHTHEIAHNMGCYHDKNNSDTQHA--YRHGWRYCEGADP-YRTIMSYYHNGCG-GDPTSEDDPIVPRVNYFSNPNVTYLNKSTGTAAADNARCIEDSMVAVSEFRDDGDFVCSDDGDTCTVDSDCCVGFCGSAGICATEQCGGAGGDTATIEDMVC 455
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Match: A0A836C8G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G9_9STRA) HSP 1 Score: 103 bits (256), Expect = 7.590e-22 Identity = 62/156 (39.74%), Postives = 87/156 (55.77%), Query Frame = 1
Query: 61 RDTFAADLVVLVGSFSGTCGLGYVNFNTRIASAPYGFSLIDARCFDSKTTTH--EIGHNLGCLHDLANNGLTAVND----YSHGMRYCTGSDTRFHTIMAYYCAYNAPAGYVGDFVPGINYFSNPDVDYDGRVTGSATKNNARTVRENMEAVSKFR 510
RD ++ADL+ ++ CGLG+V + A++ YG S + C S H EIGHNLG HD++ +G ++ YS G RYC S F TIMAY C N P I YFS+P + Y+G TG+AT++NART+R + AV+ +R
Sbjct: 462 RDAYSADLMQMLTEDPRYCGLGWVLNSATNANSKYGNSAVQVLCLGSSNWAHIHEIGHNLGAHHDVSTDGASSATGSDWPYSFGYRYC--STPNFRTIMAYTCNPNTS--------PRIPYFSSPLITYNGYPTGTATEDNARTLRSSRTAVANYR 607
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Match: A0A1L3SRS4_9HYPH (Fibronectin type-III domain-containing protein n=1 Tax=Aquibium oceanicum TaxID=1670800 RepID=A0A1L3SRS4_9HYPH) HSP 1 Score: 102 bits (253), Expect = 2.050e-21 Identity = 65/157 (41.40%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 43 AAVSVLRDTFAADLVVLVGSFSGTCGLGYVNFNTRIASAPYGFSLIDARCFDSKTTTHEIGHNLGCLHDLANNGLTAVNDYSHGMRYCTGSDTRFHTIMAYYCAYNAPAGYVGDFVPGINYFSNPDVDYDGRVTGSATKNN-ARTVRENMEAVSKFR 510
AAV R+T ADLV L+ + + CG+ +VN +SA Y FS+ C S T +HE+GHN G LHD+AN+G +Y +G + F TI +Y AP GY I FSNPDV Y+G VTG+ T +N AR RE V+ FR
Sbjct: 269 AAVHAQRETLGADLVALLVNHTEYCGIAWVN-----SSAAYAFSVTTHTCVKSHTLSHELGHNFGALHDVANSGSNPPYNYGYGYIH---PQNLFRTIQSY----GAPCGYC----TRIGNFSNPDVTYNGHVTGTVTTHNVARVHRERKSTVAAFR 409
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Match: A0A835YSD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD2_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 7.960e-20 Identity = 55/159 (34.59%), Postives = 88/159 (55.35%), Query Frame = 1
Query: 49 VSVLRDTFAADLVVLVGSFSGTCGLGYVNFNTRIASAPYGFSLIDARCFDSKTTTHEIGHNLGCLHDLANNGLTAVND----YSHGMRYCTGSDTRFHTIMAYYCAYNAPAGYVGDFVPGINYFSNPDVDYDGRVTGSATKNNARTVRENMEAVSKFRI 513
V+ R+T+ ADL+ ++ + CGLG++ + + YG S + CF + + HEIGHN+GC HD+ +G A YS G RYC+ + F T+MAY C + + + YFS+P+V Y G TG+ ++N RT++++ VS FR+
Sbjct: 419 VAAARNTYGADLIQMMTEDTAYCGLGWLMTDKSPSFEKYGNSAVFNDCFMNLSHIHEIGHNMGCHHDIGTDGANAAAGSLWPYSFGYRYCSAPN--FRTVMAYACTSGSASR--------MPYFSSPNVYYMGYPTGTDIEDNVRTLKDSKLTVSNFRL 567
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Match: A0A835YK21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK21_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.070e-19 Identity = 57/158 (36.08%), Postives = 84/158 (53.16%), Query Frame = 1
Query: 49 VSVLRDTFAADLVVLVGSFSGTCGLGYVNFNTRIASAPYGFSLIDARCFDSKTTTHEIGHNLGCLHDLANNGLTAVNDYSHGMRYCTGSDTR---FHTIMAYYCAYNAPAGYVGDFVPGINYFSNPDVDYDGRVTGSA-TKNNARTVRENMEAVSKFR 510
V+ LRD + ADLV ++ CG G + + + A YG+S++ + C S + HEIGHN+GC H++ N+G T V Y G RYC T+ F TIM+Y C + YFS+P++ Y G TG+A T +N R + + V+ FR
Sbjct: 407 VTFLRDFYRADLVQMIIEAPEYCGYGNLLSSASSSFASYGYSVVYSDCIASYSHIHEIGHNMGCQHNVENSGQTTVWPYGDGYRYCNDGVTQAPYFRTIMSYACT----------GATRVPYFSSPNIYYQGVATGTAATADNLRVLLQTKYTVANFR 554
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Match: UPI001AF679C6 (M12 family metallo-peptidase n=1 Tax=Luteitalea sp. TBR-22 TaxID=2802971 RepID=UPI001AF679C6) HSP 1 Score: 94.4 bits (233), Expect = 6.740e-19 Identity = 64/177 (36.16%), Postives = 99/177 (55.93%), Query Frame = 1
Query: 7 SASAELSTLRSDA-----AVSVLRDTFAADLVVLVGSFSGT--CGLGYVNFNTRIASAPYGFSLIDARC-FDSKTTTHEIGHNLGCLHDLAN-NGLTAVNDYSHGMRYCTGSDTRFHTIMAYYCAYNAPAGYVGDFVPGINYFSNPDVDYDGRVTGSATKNNARTVRENMEAVSKFR 510
SAS ++++LRS + LRDT+AAD+V ++G +SGT CG GY+ + A F+++D C + + HE+GHN G LH+ A+ GLT Y++G + +G+ F T+++Y G V I Y S+P Y GR TG++T++NART+ N V+ FR
Sbjct: 239 SASTDVASLRSPTDGKADGIHALRDTYAADIVTMLGEYSGTGSCGYGYIMTPLSSSFASSAFNVVDRGCSLGNLSYAHEVGHNQGMLHNRADAGGLTPSQPYAYGYQDPSGA---FRTVLSY-----------GSMVR-IPYLSSPLTTYGGRPTGTSTEDNARTLSLNAATVAAFR 400
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Match: A0A0S2FM04_9GAMM (Peptidyl-Asp metalloendopeptidase domain protein n=9 Tax=Lysobacter TaxID=68 RepID=A0A0S2FM04_9GAMM) HSP 1 Score: 92.4 bits (228), Expect = 2.380e-18 Identity = 61/152 (40.13%), Postives = 78/152 (51.32%), Query Frame = 1
Query: 61 RDTFAADLVVLVGSFSGTCGLGYVNFNTRIASAPYGFSLIDARCFDSKTT-THEIGHNLGCLHDLANNGLTAVNDYSHGMRYCTGSDTRFHTIMAYYCAYNAPAGYVGDFVPGINYFSNPDVDYDGRVTGSATK-NNARTVRENMEAVSKFR 510
R+T AD+ VLV + CGLGY+N N A FS++ A C + HEIGHN G HD +N G V Y HG G + TIMAY C N P +NY+SNP++ Y+G G+A K NNAR + E V+ FR
Sbjct: 293 RNTIKADVNVLVITDPAYCGLGYLNSNAASA-----FSVVGASCMTGYYSFAHEIGHNFGAHHDPSN-GTNTVYPYGHGY---WGPGNAWRTIMAYSCGSNCPR---------LNYWSNPNITYNGAPMGTAAKSNNARVLNERAATVAAFR 426
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Match: A0A0S2G2X6_9GAMM (Peptidyl-Asp metalloendopeptidase domain protein n=4 Tax=Xanthomonadaceae TaxID=32033 RepID=A0A0S2G2X6_9GAMM) HSP 1 Score: 90.9 bits (224), Expect = 8.290e-18 Identity = 60/152 (39.47%), Postives = 79/152 (51.97%), Query Frame = 1
Query: 61 RDTFAADLVVLVGSFSGTCGLGYVNFNTRIASAPYGFSLIDARCFDSKTT-THEIGHNLGCLHDLANNGLTAVNDYSHGMRYCTGSDTRFHTIMAYYCAYNAPAGYVGDFVPGINYFSNPDVDYDGRVTGSATKNN-ARTVRENMEAVSKFR 510
R++ AAD+ VL+ + CGLGY+N N A FS++ A C + HEIGHN G HD +N G V Y HG G + + TIMAY C N P NY+SNP++ Y+G G+A KNN AR + E V+ FR
Sbjct: 291 RNSIAADVNVLIITDPAYCGLGYLNSNAASA-----FSVVGASCMTGYYSFAHEIGHNFGAHHDPSN-GTNTVYAYGHGY---WGPNNAWRTIMAYNCPVNCPRR---------NYWSNPNITYNGAPMGTAAKNNNARVLNERATTVAAFR 424
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Match: A0A3N2RBJ0_LYSEN (Peptidyl-Asp metalloendopeptidase n=7 Tax=Lysobacter TaxID=68 RepID=A0A3N2RBJ0_LYSEN) HSP 1 Score: 90.5 bits (223), Expect = 1.320e-17 Identity = 59/152 (38.82%), Postives = 79/152 (51.97%), Query Frame = 1
Query: 61 RDTFAADLVVLVGSFSGTCGLGYVNFNTRIASAPYGFSLIDARCFDSKTT-THEIGHNLGCLHDLANNGLTAVNDYSHGMRYCTGSDTRFHTIMAYYCAYNAPAGYVGDFVPGINYFSNPDVDYDGRVTGSATK-NNARTVRENMEAVSKFR 510
R+T AD+ VL+ + CGLGY+N +SA FS++ A C + HEIGHN G HD +N G + Y HG G + TIMAY C N P +NY+SNP++ Y+G G+A K NNAR + E V+ FR
Sbjct: 321 RNTIKADVNVLIITDPAYCGLGYLN-----SSATNAFSVVGASCMTGYYSFAHEIGHNFGAHHDPSN-GNNTIYPYGHGY---WGPGNAWRTIMAYNCGSNCPR---------LNYWSNPNITYNGSPMGTAAKSNNARVLNERAATVAGFR 454 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1485.3672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1485.3672.1 >prot_H-canaliculatus_F_contig1485.3672.1 ID=prot_H-canaliculatus_F_contig1485.3672.1|Name=mRNA_H-canaliculatus_F_contig1485.3672.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=212bp AESASAELSTLRSDAAVSVLRDTFAADLVVLVGSFSGTCGLGYVNFNTRIback to top mRNA from alignment at H-canaliculatus_F_contig1485:7942..10801- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1485.3672.1 ID=mRNA_H-canaliculatus_F_contig1485.3672.1|Name=mRNA_H-canaliculatus_F_contig1485.3672.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2860bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1485:7942..10801- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1485:7942..10801- >mRNA_H-canaliculatus_F_contig1485.3672.1 ID=mRNA_H-canaliculatus_F_contig1485.3672.1|Name=mRNA_H-canaliculatus_F_contig1485.3672.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1272bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1485:7942..10801- (Hapterophycus canaliculatus Oshoro5f female)back to top |