mRNA_H-canaliculatus_F_contig14842.3668.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Match: D8LCI4_ECTSI (Rhodanese domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI4_ECTSI) HSP 1 Score: 244 bits (624), Expect = 4.510e-78 Identity = 118/136 (86.76%), Postives = 127/136 (93.38%), Query Frame = 1
Query: 1 QDQQEGVQDFRDHIDPDNHGPKVVEYEADASPSYDRPYLILDVRPPDDFQRCRIMQARSFEAKLLNQDRMTPELYMYKNREGGLVVLYSNDDAEACHAARTLVHRGFDNIFVLSGGLTAFARGGFHDFVEGDAEAL 408
QDQQEGVQDFRDHIDPD+HGPKVVEYE DA PSYDRPYL+LDVR P++F+RCRI+QARSFEAKLLNQDRMTPELYMYKNREGGLV+LYSNDDA+A HAARTL+HRGFDNIFVLSGGL AFAR GF FVEGD EAL
Sbjct: 76 QDQQEGVQDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRSPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADAGHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGDVEAL 211
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Match: A0A6H5JFI4_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI4_9PHAE) HSP 1 Score: 248 bits (632), Expect = 1.170e-77 Identity = 118/138 (85.51%), Postives = 128/138 (92.75%), Query Frame = 1
Query: 1 QDQQEGVQDFRDHIDPDNHGPKVVEYEADASPSYDRPYLILDVRPPDDFQRCRIMQARSFEAKLLNQDRMTPELYMYKNREGGLVVLYSNDDAEACHAARTLVHRGFDNIFVLSGGLTAFARGGFHDFVEGDAEALSP 414
QDQQEGV DFRDHIDPD+HGPKVVEYE DA PSYDRPYL+LDVR P++F+RCRI+QARSFEAKLLNQDRMTPELYMYKNREGGLV+LYSNDDA+ACHAARTL+HRGFDNIFVLSGGL AFAR GF FVEG+ EAL P
Sbjct: 39 QDQQEGVHDFRDHIDPDHHGPKVVEYEPDAKPSYDRPYLVLDVRTPEEFKRCRIVQARSFEAKLLNQDRMTPELYMYKNREGGLVILYSNDDADACHAARTLIHRGFDNIFVLSGGLVAFAREGFQSFVEGNVEALPP 176
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Match: A0A835ZB11_9STRA (Rhodanese-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB11_9STRA) HSP 1 Score: 154 bits (388), Expect = 5.560e-42 Identity = 78/132 (59.09%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 1 QDQQEGVQDFRDHIDPDNHGPKVVEYEADASPSYDRPYLILDVRPPDDFQRCRIMQARSFEAKLLNQDRMTPELYMYKNREGGLVVLYSNDDAEACHAARTLVHRGFDNIFVLSGGLTAFARGGFH-DFVEG 393
QD QEGVQD DPD+HGP VV Y +A +YDRPYLILD+R P+++ R+ QARSF +LNQDRMT EL+ +KNREG L+VLY +++ AC AA+TL+HRGFDN++VLSGGL AF H DF+EG
Sbjct: 60 QDLQEGVQDMASKQDPDSHGPVVVTYTEEAEAAYDRPYLILDLRTPEEYTVHRVAQARSFPIVMLNQDRMTAELFKFKNREGTLIVLYEDEERLACQAAQTLLHRGFDNVYVLSGGLQAFTH--LHPDFIEG 189
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Match: A0A7S2V7G5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7G5_9STRA) HSP 1 Score: 125 bits (315), Expect = 6.250e-32 Identity = 58/103 (56.31%), Postives = 77/103 (74.76%), Query Frame = 1
Query: 58 GPKVVEYEADASPSYDRPYLILDVRPPDDFQRCRIMQARSFEAKLLNQDRMTPELYMYKNREGGLVVLYSNDDAEACHAARTLVHRGFDNIFVLSGGLTAFAR 366
GP+VV EAD PSY RPYL+LD+R ++ +C IMQARSF ++LNQD+M +LY YKN+EG L+VLY +++A + A TLV RGFDNIF+L+GGL F+
Sbjct: 86 GPRVVTIEADEKPSYQRPYLLLDLRTQQEYTQCHIMQARSFPMQMLNQDKMIADLYQYKNKEGQLIVLYCDNEAISSQAGHTLVTRGFDNIFLLTGGLFTFSE 188
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Match: A0A7S3XJW4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJW4_HETAK) HSP 1 Score: 119 bits (298), Expect = 2.590e-30 Identity = 58/127 (45.67%), Postives = 85/127 (66.93%), Query Frame = 1
Query: 58 GPKVVEYEADASPSYDRPYLILDVRPPDDFQRCRIMQARSFEAKLLNQDRMTPELYMYKNREGGLVVLYSNDDAEACHAARTLVHRGFDNIFVLSGGLTAFARGGFHDFVEGDAEALSPVAAPASGG 438
GP++V EAD P Y RPY+I D+R D++++C I+QAR+ +LLNQD+M+ E+Y +KN++G L++LY ND + AA + RGFDNI++LSGGL AF+ +VEG + P + A GG
Sbjct: 23 GPRMVTIEADEKPQYQRPYIIFDLREIDEYRQCHILQARNHPFRLLNQDKMSAEMYQFKNKDGHLIILYDNDTSIVQQAAHVMCTRGFDNIYILSGGLYAFSER-HPQYVEG-VPPVRPASQQARGG 147
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Match: A0A3R7KRS2_9STRA (Rhodanese domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KRS2_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.270e-27 Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = 1
Query: 49 DNHGPKVVEYEADASPSYDRPYLILDVRPPDDFQRCRIMQARSFEAKLLNQDRMTPELYMYKNREGGLVVLYSNDDAEACHAARTLVHRGFDNIFVLSGGLTAFARGGFHDFVEGDAEALSPV 417
DN GP++V Y+A+ + YD PYL+LD RP ++F RI +A+SF A LN+D + PE++ +KN+E LV++Y DD A TLV RGFDNI+VL+GG+ +A F D +EG PV
Sbjct: 94 DNCGPRIVSYDAEENEDYDPPYLVLDTRPKEEFATNRIHRAKSFPASFLNRDVLLPEMHQFKNQENKLVIIYDLDDKAVAQTAHTLVQRGFDNIYVLTGGIMDYADE-FPDQIEGTPLPRKPV 215
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Match: A0A2D4CAV7_PYTIN (Rhodanese domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAV7_PYTIN) HSP 1 Score: 115 bits (289), Expect = 2.360e-27 Identity = 57/112 (50.89%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 58 GPKVVEYEADASPSYDRPYLILDVRPPDDFQRCRIMQARSFEAKLLNQDRMTPELYMYKNREGGLVVLYSNDDAEACHAARTLVHRGFDNIFVLSGGLTAFARGGFHDFVEG 393
GP+VV Y+A+ YD PYLILD RP ++F RI +A+SF A LN+D + PE+Y +KN+E L++LY D+ A TLV RGFDNI+VL+GGL FA F D +EG
Sbjct: 114 GPRVVSYDAEEREEYDPPYLILDTRPKEEFAVNRITRAKSFPAAFLNRDTLLPEMYKFKNQESKLIILYDQDEKTVTQTAHTLVQRGFDNIYVLTGGLVDFADE-FPDRIEG 224
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Match: A0A6A3P2P0_9STRA (Rhodanese domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P2P0_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.220e-26 Identity = 58/121 (47.93%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 40 IDPDNH---GPKVVEYEADASPSYDRPYLILDVRPPDDFQRCRIMQARSFEAKLLNQDRMTPELYMYKNREGGLVVLYSNDDAEACHAARTLVHRGFDNIFVLSGGLTAFARGGFHDFVEG 393
+D DN GP++V YEA+ YD PYL+LD R D+F RI +A+++ A LN+D + PE++ +KN+E LV+LY DD A A TLV RGFDNI+VL+GGL +A F D +EG
Sbjct: 100 VDEDNQESCGPRIVSYEAEEKEDYDPPYLVLDTRTKDEFAANRIHRAKNYPATFLNRDVLLPEMHQFKNQEAKLVILYDLDDKTAAQTAHTLVQRGFDNIYVLTGGLVDYADE-FPDHIEG 219
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Match: A0A662Y6U1_9STRA (Rhodanese domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6U1_9STRA) HSP 1 Score: 109 bits (273), Expect = 8.230e-25 Identity = 53/120 (44.17%), Postives = 75/120 (62.50%), Query Frame = 1
Query: 58 GPKVVEYEADASPSYDRPYLILDVRPPDDFQRCRIMQARSFEAKLLNQDRMTPELYMYKNREGGLVVLYSNDDAEACHAARTLVHRGFDNIFVLSGGLTAFARGGFHDFVEGDAEALSPV 417
GP++V Y+A+ YD PYL+LD R +++ RI +A+SF A LN+D + PE++ +KN E L+++Y DD A A LV RGFDN++VLSGGL +A F D +EG PV
Sbjct: 139 GPRIVSYDAEEKEDYDPPYLVLDTRTKEEYAANRIHRAKSFPASYLNRDVLLPEMHQFKNNEAKLIIIYDQDDKTAGQTAHILVQRGFDNVYVLSGGLVDYADE-FPDHIEGTPLPRKPV 257
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Match: A0A6A4CRZ4_9STRA (Rhodanese domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4CRZ4_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.160e-24 Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = 1
Query: 40 IDPDNH---GPKVVEYEADASPSYDRPYLILDVRPPDDFQRCRIMQARSFEAKLLNQDRMTPELYMYKNREGGLVVLYSNDDAEACHAARTLVHRGFDNIFVLSGGLTAFA 363
+D DN GP++V YEA+ YD PYL+LD R D+F RI +A+++ A LN+D + PE++ +KN+E LV+LY DD A A TLV RGFDNI+VL+GGL +A
Sbjct: 389 VDEDNQESCGPRIVSYEAEEKEDYDPPYLVLDTRTKDEFAANRIHRAKNYPATFLNRDVLLPEMHQFKNQEAKLVILYDLDDKTAAQTAHTLVQRGFDNIYVLTGGLVDYA 499 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14842.3668.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14842.3668.1 >prot_H-canaliculatus_F_contig14842.3668.1 ID=prot_H-canaliculatus_F_contig14842.3668.1|Name=mRNA_H-canaliculatus_F_contig14842.3668.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=243bp QDQQEGVQDFRDHIDPDNHGPKVVEYEADASPSYDRPYLILDVRPPDDFQback to top mRNA from alignment at H-canaliculatus_F_contig14842:219..1729- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14842.3668.1 ID=mRNA_H-canaliculatus_F_contig14842.3668.1|Name=mRNA_H-canaliculatus_F_contig14842.3668.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1511bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14842:219..1729- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14842:219..1729- >mRNA_H-canaliculatus_F_contig14842.3668.1 ID=mRNA_H-canaliculatus_F_contig14842.3668.1|Name=mRNA_H-canaliculatus_F_contig14842.3668.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1458bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14842:219..1729- (Hapterophycus canaliculatus Oshoro5f female)back to top |