prot_H-canaliculatus_F_contig1483.3659.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1483.3659.1
Unique Nameprot_H-canaliculatus_F_contig1483.3659.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length374
Homology
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Match: D7G2P1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P1_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 6.920e-104
Identity = 162/170 (95.29%), Postives = 166/170 (97.65%), Query Frame = 0
Query:  204 QSKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLGADEREAYRMRARDDQKRYKAEQADKPVAKKEDFYGNDERGQSTELVCPLGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPLPTR 373
            QSKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTL +DEREAYR RARDDQKRYKAEQADKPV KKE+FY NDE+GQSTELVCP+GRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPLPTR
Sbjct:  140 QSKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQADKPVVKKEEFYTNDEKGQSTELVCPMGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPLPTR 309          
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Match: A0A6H5KV94_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV94_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 2.200e-102
Identity = 162/170 (95.29%), Postives = 166/170 (97.65%), Query Frame = 0
Query:  204 QSKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLGADEREAYRMRARDDQKRYKAEQADKPVAKKEDFYGNDERGQSTELVCPLGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPLPTR 373
            QSKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTL +DEREAYR RARDDQKRYKAEQADKPV KKE+FY NDE+GQSTELVCP+GRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPLPTR
Sbjct:  247 QSKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQADKPVVKKEEFYTNDEKGQSTELVCPMGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPLPTR 416          
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Match: A0A835ZK76_9STRA (Histone-like transcription factor (CBF/NF-Y) and archaeal histone-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK76_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.240e-24
Identity = 70/186 (37.63%), Postives = 99/186 (53.23%), Query Frame = 0
Query:  209 SAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLGADEREAYRMRARDDQKRYKAEQADK-----------------------PVAKKEDFYGNDERGQSTELVCPLGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPLP 371
            SAW+LF+ + R++V+ +NPD++ +QQ K++S+IW+ L     E Y  RAR + KRY    AD                                        S E VCP+GRI RIIKLD +V +VTKEATAL+ KAM+LF   +A+ S+ +     RR +K QDI   +H  D+++W K DF  P
Sbjct:  172 SAWILFVNDYRDRVRSENPDLSCSQQSKVLSQIWQQLDRPTVEGYIERARAESKRYH-NLADSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPVSLEAVCPMGRIRRIIKLDPEVGNVTKEATALVEKAMQLFLEQLAQRSWEMCTEDGRRNIKTQDIAMCVHALDEYHWCKADFEKP 356          
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Match: A0A4D9D0Z2_9STRA (HMG box domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0Z2_9STRA)

HSP 1 Score: 112 bits (281), Expect = 5.210e-24
Identity = 73/172 (42.44%), Postives = 104/172 (60.47%), Query Frame = 0
Query:  209 SAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLGADEREAYRMRARDDQKRYKAE-------QADKPVAKKEDFYGND-ERGQ--STELVCPLGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPL 370
            SAWMLF  E RE +K++ P + VT+Q KIMSE WKTL  + R  +  RA +D++RY+ E       QA K V K       D E G+  + E++ PL RI +I+KLD +V++V+KEA  L+GKA ELF  ++ +ES     S  RR LK  D+   M  Q +F +++ DFP+
Sbjct:  167 SAWMLFTAEARELLKKEQPSLRVTEQVKIMSEQWKTLDDEARRPFLERAANDKERYQEEKLRWEGNQAAKAVPKGGKELRKDVEAGRRLADEMLFPLARIRKIMKLDPEVKTVSKEAALLVGKATELFLDMIGEESHKA--SGRRRTLKSDDVAVAMRRQGKFAFLRPDFPM 336          
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Match: D8LIR0_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR0_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 7.390e-21
Identity = 56/166 (33.73%), Postives = 98/166 (59.04%), Query Frame = 0
Query:  205 SKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLGADEREAYRMRARDDQKRYKAEQADKPVAKKEDFYGNDER--GQSTELVCPLGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDF 368
            ++ +SAWMLF+ + RE V++++P +AV   QKI+SE+WK LG  E   Y   A +D++R K E A   + K      +     G  T LV PL R+ + ++LD  V +++KE   L+ KA E+F +++A  ++++ +   R+ ++  D+ D +    + YW+KD+F
Sbjct:  182 ARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSEMWKALGEAEVARYAKLAAEDKERVKNELAAAGLTKLPTKNSSSAAVAGGPTSLVLPLARVRKTVRLDPSVGNISKEGLLLVTKATEVFMAVLADHAWNIGRQTGRKSVRPCDVADFVFAAPEMYWLKDEF 347          
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Match: A0A7S0T0M3_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T0M3_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.070e-12
Identity = 55/166 (33.13%), Postives = 94/166 (56.63%), Query Frame = 0
Query:  206 KPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLGADEREAYRMRARDDQKRYKAEQADKPVAKKEDFYGNDERGQSTELVCPLGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQD--ITDIMHNQDQFYWIKDDFP 369
            KP SAW  F  ERR Q+++ +   A   +Q  +SE +K L   E++ Y   A+ D+ RY  E   + V      Y  D+   + E++ P+GR+ +IIKLD +V+++ +EA A I KA + F  L++K+S   A+S+   +  ++D  I + +H  + F +++ DFP
Sbjct:   81 KPYSAWTYFSTERRLQIEKSSGTFAEIAKQ--ISEEYKKLSNIEKQKYIDLAKQDKLRYNKEI--EAVGSSISNYDKDKGLPTDEVIIPMGRVKKIIKLDPEVKALGREAVAAITKATDEFVVLLSKKSLLSAKSRGSTVKTIRDTDIINCIHMNELFEFLRLDFP 242          
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Match: K0SB38_THAOC (HMG box domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SB38_THAOC)

HSP 1 Score: 77.8 bits (190), Expect = 3.250e-12
Identity = 55/169 (32.54%), Postives = 89/169 (52.66%), Query Frame = 0
Query:  206 KPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLGADEREAYRMRARDDQKRYKAEQADK-------PVAKKEDFYGNDERGQSTELVCPLGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDD 367
            + ++A+ +F  E+R+ VK++NP   V    K + ++W  L A E+  Y   A +++ R  A  A +       P    E     DE      L  P+GRI +I KLD +V+ ++KEAT LI K++ELF   +  E  ++AQ  NRR L   DI  +   +++F ++K D
Sbjct:  157 RARTAYFIFADEKRDDVKKENPGGGVAVVAKAIGQLWSALEAPEKLKYENAAAEERARV-ARDAQRLKDAGLWPEKGAEVAQALDEDA----LAFPVGRIRKICKLDPEVKGMSKEATLLITKSVELFCHRLGMECVTMAQMSNRRKLLPDDIVQVASMKERFMFMKSD 320          
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Match: A0A7S2TRR8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TRR8_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 2.710e-8
Identity = 51/169 (30.18%), Postives = 92/169 (54.44%), Query Frame = 0
Query:  206 KPQSA---WMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLGADEREAYRMRARDDQKRYKAEQADKPVAKKEDFYGNDERGQSTELVCPLGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPLP 371
            KPQ A   + LF+ E R++V+ +   ++V    K +S+IW  L  +E++ Y  RA  D++R++ E+ +   A           G +TEL  P  +I RI++LD + +S +KE   LI K+ E F  L+A  +  VA+S  R+++K +D  + +    +  +++   P+P
Sbjct:   32 KPQRASTPYFLFLDEYRQKVQAEE-GMSV---HKKLSQIWNNLPPEEKKQYVDRAEVDKERFRKEKEEYEKAGGTTTQKRKREGPTTELSAP--KIRRIMQLDPETKSCSKEGLNLICKSTENFVGLLASRAQGVAKSAGRKIIKKEDFYNAILQYSELAFLQ--VPMP 192          
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Match: A0A835I3M5_9MAGN (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835I3M5_9MAGN)

HSP 1 Score: 62.0 bits (149), Expect = 4.460e-8
Identity = 33/91 (36.26%), Postives = 53/91 (58.24%), Query Frame = 0
Query:  282 NDERGQSTELVCPLGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITD-IMHNQDQFYWIKDDFPLP 371
            NDE  +      PLGR+ +I+KLDQD++ VT EA  LI  +  LF   +A++S  VA  + R+++KL  +T  +  +Q    ++ D  P+P
Sbjct:   14 NDEETEILRPSFPLGRVKKIMKLDQDIKKVTSEALLLISLSTVLFLQFLAEKSSEVAVEKKRKIIKLDHLTSAVKRHQPTNDFLIDSLPVP 104          
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Match: UPI001CF9AB8B (nuclear transcription factor Y subunit C-6 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF9AB8B)

HSP 1 Score: 57.0 bits (136), Expect = 2.560e-6
Identity = 29/91 (31.87%), Postives = 52/91 (57.14%), Query Frame = 0
Query:  284 ERGQSTELVCPLGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDI-TDIMHNQDQFYWIKDDFPLPTR 373
            E  +++    P+GRI +I+KLD+D+  +T EA  L+  + ELF   +A++S  VA  + R+ +KL  + T +  +Q    ++ D  P P +
Sbjct:   10 ENTENSRPEFPIGRIKKIVKLDEDINKITSEAMFLVSCSTELFLQFLAEKSAEVAIEKKRKTIKLDHLRTAVKRHQPTSDFLLDSLPQPVQ 100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1483.3659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2P1_ECTSI6.920e-10495.29HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KV94_9PHAE2.200e-10295.29HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZK76_9STRA1.240e-2437.63Histone-like transcription factor (CBF/NF-Y) and a... [more]
A0A4D9D0Z2_9STRA5.210e-2442.44HMG box domain-containing protein n=2 Tax=Monodops... [more]
D8LIR0_ECTSI7.390e-2133.73HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S0T0M3_9STRA2.070e-1233.13Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
K0SB38_THAOC3.250e-1232.54HMG box domain-containing protein n=1 Tax=Thalassi... [more]
A0A7S2TRR8_9EUKA2.710e-830.18Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A835I3M5_9MAGN4.460e-836.26CBFD_NFYB_HMF domain-containing protein n=1 Tax=Co... [more]
UPI001CF9AB8B2.560e-631.87nuclear transcription factor Y subunit C-6 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 203..273
e-value: 3.3E-15
score: 66.5
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 205..269
e-value: 1.1E-14
score: 54.6
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 204..272
score: 15.003
IPR009072Histone-foldGENE3D1.10.20.10coord: 281..369
e-value: 1.4E-15
score: 59.4
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 285..369
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 196..280
e-value: 1.0E-16
score: 62.9
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 192..268
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 294..352
e-value: 4.1E-12
score: 46.2
NoneNo IPR availablePANTHERPTHR10252:SF95NUCLEAR FACTOR Y, SUBUNIT C13coord: 258..351
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 258..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1483contigH-canaliculatus_F_contig1483:12940..18318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1483.3659.1mRNA_H-canaliculatus_F_contig1483.3659.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1483 12908..18521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1483.3659.1 ID=prot_H-canaliculatus_F_contig1483.3659.1|Name=mRNA_H-canaliculatus_F_contig1483.3659.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=374bp
MPANPLTAAATAFAAAEGGYGGDGGGGGGVGTPLPSGGAAAAAAGVGATT
ATAVAAQPPAPAAPAPAAPAAPPMIALPPMSPSVAAAAAAAPTVANPSAP
STAAPPQGGPPASGLTPSTPGSTGNGGGVEGVTTGATNGSPPVAAAVAAP
VAGDAATAAGLAAAAAGGGAAAVAGGGSPNGVVAATTGGSSSGKKRSSAS
AGGQSKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLGADER
EAYRMRARDDQKRYKAEQADKPVAKKEDFYGNDERGQSTELVCPLGRIGR
IIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQD
ITDIMHNQDQFYWIKDDFPLPTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR036910HMG_box_dom_sf
IPR009072Histone-fold
IPR009071HMG_box_dom