mRNA_H-canaliculatus_F_contig14820.3653.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Match: D8LIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN4_ECTSI) HSP 1 Score: 414 bits (1063), Expect = 1.070e-138 Identity = 203/228 (89.04%), Postives = 219/228 (96.05%), Query Frame = 1
Query: 1 RSLEGISVRSMMVNLFFQSVIFLYLADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGGEDGQPRRRIPKVSVRAKETYRKSKTKEFDDIATAHLLYLIAPLMVGYAAYSLLNQQHKGWYSWVLSSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPTMHRLACFRDDIVFFVFLYQRYLYPVDRARRNEYGQSATMSEDAKK 684
RSLEGISVR M+VNLFFQ+VIFL LADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGGEDGQPRR +P++ +AKE+YRKSKTKEFDD+ATAHLLYL+ PLMVGYAAYSLLNQQH+GWYSWVL+SLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMP MHRLACFRDDI+FF+FLYQR+LYPVD+ARRNEYGQSA MS DA+K
Sbjct: 446 RSLEGISVRGMLVNLFFQAVIFLSLADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGGEDGQPRRWVPRMMFQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPIMHRLACFRDDIIFFIFLYQRHLYPVDKARRNEYGQSAKMSADAEK 673
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Match: A0A6H5KCZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ3_9PHAE) HSP 1 Score: 330 bits (845), Expect = 5.810e-113 Identity = 156/176 (88.64%), Postives = 171/176 (97.16%), Query Frame = 1
Query: 157 MVGRLDWGGEDGQPRRRIPKVSVRAKETYRKSKTKEFDDIATAHLLYLIAPLMVGYAAYSLLNQQHKGWYSWVLSSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPTMHRLACFRDDIVFFVFLYQRYLYPVDRARRNEYGQSATMSEDAKK 684
MVGRLDWGG+DGQPRRR+P+++ +AKE+YRKSKTKEFDD+ATAHLLYL+ PLMVGYAAYSLLNQQH+GWYSWVL+SLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMP MHRLACFRDDI+FF+FLYQRYLYPVD+ARRNEYGQSA MS DA+K
Sbjct: 1 MVGRLDWGGKDGQPRRRVPRMTFQAKESYRKSKTKEFDDVATAHLLYLVGPLMVGYAAYSLLNQQHRGWYSWVLNSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPIMHRLACFRDDIIFFIFLYQRYLYPVDKARRNEYGQSAKMSADAEK 176
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Match: A0A7S4NHV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NHV2_9STRA) HSP 1 Score: 271 bits (694), Expect = 4.590e-89 Identity = 136/218 (62.39%), Postives = 169/218 (77.52%), Query Frame = 1
Query: 1 RSLEGISVRSMMVNLFFQSVIFLYLADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGGEDGQPRRRIPKVSVRAKETYRKSKTKEFDDIATAHLLYLIAPLMVGYAAYSLLNQQHKGWYSWVLSSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPTMHRLACFRDDIVFFVFLYQRYLYPVDRARRNEYGQ 654
+S+EGISVRSM+VN FQ +I+LYLADN+T+ MILV+N IGL IE+WK+ R + G K+ ETY KS T+E+D+IAT HL+Y+ PL+ GY YSL++Q+H+GWYSWVL++LVG++YMFGFVMMTPQLFINYKLKSVAH+ WR MS+K INTFIDDLFAF++ MP MHRLAC RDD VFFVFLYQR++Y D +R NEYGQ
Sbjct: 29 KSMEGISVRSMIVNAGFQVIIWLYLADNETSRMILVSNGIGLLIELWKISRAITVSFSGG-----------KIQWTETETYAKSTTREYDEIATNHLMYVAMPLVSGYGMYSLVHQKHRGWYSWVLNALVGYIYMFGFVMMTPQLFINYKLKSVAHLNWRTMSFKSINTFIDDLFAFVIRMPIMHRLACLRDDAVFFVFLYQRWIYRTDYSRVNEYGQ 235
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Match: A0A836CN46_9STRA (Cleft lip and palate transmembrane protein 1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN46_9STRA) HSP 1 Score: 282 bits (722), Expect = 7.220e-88 Identity = 136/218 (62.39%), Postives = 175/218 (80.28%), Query Frame = 1
Query: 1 RSLEGISVRSMMVNLFFQSVIFLYLADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGGEDGQPRRRIPKVSVRAKETYRKSKTKEFDDIATAHLLYLIAPLMVGYAAYSLLNQQHKGWYSWVLSSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPTMHRLACFRDDIVFFVFLYQRYLYPVDRARRNEYGQ 654
RSLEG+SVRSM+VN FFQ VI LYL DN+T+Y+ILV++A+GLAIE+WK+G+ + +W P R +P +++ A +Y KS+T+ D+ AT+HLL+++ PL+VGY AYSL+ ++H+GWYSWVL+SL GFV FGF+ MTPQLFINYKLKSVAH+PWR M YK +NTFIDD FAFI+ MP MHRLACFRDDI+FFV+LYQR+ Y D +R NEYGQ
Sbjct: 425 RSLEGLSVRSMVVNCFFQIVITLYLFDNETSYLILVSSAVGLAIELWKLGKAFSAKCEWA-----PGRLLPSITMTASASYAKSETRRHDETATSHLLFVVVPLVVGYTAYSLVQREHRGWYSWVLNSLTGFVCEFGFIAMTPQLFINYKLKSVAHLPWRTMVYKSLNTFIDDCFAFIIKMPWMHRLACFRDDIIFFVYLYQRWAYRTDYSRVNEYGQ 637
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Match: B8BSI8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSI8_THAPS) HSP 1 Score: 273 bits (697), Expect = 2.320e-87 Identity = 128/225 (56.89%), Postives = 174/225 (77.33%), Query Frame = 1
Query: 1 RSLEGISVRSMMVNLFFQSVIFLYLADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGGEDGQPRRRIPKVSVRAKETYRKSKTKEFDDIATAHLLYLIAPLMVGYAAYSLLNQQHKGWYSWVLSSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPTMHRLACFRDDIVFFVFLYQRYLYPVDRARRNEYGQSATMSED 675
+SLEG+S+RSM+VN FF +I LYLADNDT++M+L +N +GLAI++WK+ + + + + G K+ ++Y+KS+TKE+D+IAT+HLL++ PL+ GY YSL Q+HKGWYSW+L++LVGF+YMFGFVMM+PQLFINYKL+SVAH+ WR M+YK INTFIDDLFAF++ MP MHRLAC RDD++FF+F YQR+ Y VD R NE+GQ +E+
Sbjct: 128 KSLEGLSLRSMIVNCFFSIIILLYLADNDTSFMVLASNGVGLAIDIWKISKAISFKFEGG-----------KIEWVEAQSYKKSRTKEYDEIATSHLLFVTMPLVAGYGMYSLFYQKHKGWYSWILNTLVGFIYMFGFVMMSPQLFINYKLQSVAHLNWRTMTYKSINTFIDDLFAFVIKMPIMHRLACLRDDVIFFIFCYQRWKYKVDYTRVNEFGQCVAPTEE 341
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Match: A0A7S2UDR7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDR7_9STRA) HSP 1 Score: 273 bits (699), Expect = 3.140e-85 Identity = 135/230 (58.70%), Postives = 177/230 (76.96%), Query Frame = 1
Query: 1 RSLEGISVRSMMVNLFFQSVIFLYLADNDTTYMILVTNAIGLAIEVWKVGR-----FMVGRLDWGGEDGQPRRRIPKVSVRAKETYRKSKTKEFDDIATAHLLYLIAPLMVGYAAYSLLNQQHKGWYSWVLSSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPTMHRLACFRDDIVFFVFLYQRYLYPVDRARRNEYGQSATMSED 675
+S+EG+S+RSM++N+FFQ VI LYLADN+T+YM+L++N +GL IE+WK+ F GR+ W V A +Y KSKTK++D+IAT+HLL++ PL+ GY YSLL+Q+HKGW+SWVL++LVGF+YMFGFVMMTPQLFINYKL+SVAH+ WR M+YK +NTFIDDLFAF++ MP MHRLAC RDD+VFFV+LYQR+ Y VD R NE+GQ +E+
Sbjct: 357 KSMEGLSLRSMVINVFFQIVILLYLADNETSYMVLMSNGVGLLIEIWKITTAVKISFKGGRIQW---------------VEA-TSYSKSKTKKYDEIATSHLLFITMPLVAGYGMYSLLHQRHKGWHSWVLNTLVGFIYMFGFVMMTPQLFINYKLQSVAHLNWRTMTYKSVNTFIDDLFAFVIKMPIMHRLACLRDDVVFFVYLYQRWAYRVDYTRVNEFGQCIQPTEE 570
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Match: A0A7S2W867_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W867_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.060e-84 Identity = 130/218 (59.63%), Postives = 176/218 (80.73%), Query Frame = 1
Query: 1 RSLEGISVRSMMVNLFFQSVIFLYLADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGGEDGQPRRRIPKVSVRAKETYRKSKTKEFDDIATAHLLYLIAPLMVGYAAYSLLNQQHKGWYSWVLSSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPTMHRLACFRDDIVFFVFLYQRYLYPVDRARRNEYGQ 654
+ G+SVR++ +N FF +VI LYL D+DT++M+L+T++IGL IE WKV + + RL E G+ +R ++Y+ S+TKE+D+IAT+HLL+L+ PLMVGY+AYSL++ +HKGWYSW+LSSLVGF+Y FGFVMMTPQLFINYKLKSVAH+PW+ M YK +NTFIDDLF+F++ MP MHRL+C RDD++F V+LYQR++YPVD++R NEYGQ
Sbjct: 385 KDFRGLSVRTIALNCFFHAVILLYLFDSDTSWMVLMTSSIGLVIEFWKVSKAI--RLQVDPETGR-------WGLRESDSYQSSRTKEYDEIATSHLLFLVLPLMVGYSAYSLVHFKHKGWYSWILSSLVGFIYAFGFVMMTPQLFINYKLKSVAHLPWKAMVYKSLNTFIDDLFSFVIKMPWMHRLSCLRDDVIFLVYLYQRWIYPVDKSRVNEYGQ 593
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Match: A0A7S4RNP8_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RNP8_9STRA) HSP 1 Score: 271 bits (692), Expect = 2.160e-83 Identity = 129/225 (57.33%), Postives = 172/225 (76.44%), Query Frame = 1
Query: 1 RSLEGISVRSMMVNLFFQSVIFLYLADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGGEDGQPRRRIPKVSVRAKETYRKSKTKEFDDIATAHLLYLIAPLMVGYAAYSLLNQQHKGWYSWVLSSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPTMHRLACFRDDIVFFVFLYQRYLYPVDRARRNEYGQSATMSED 675
+S+EG+S+RSM+VN FFQ VI LYLADN+T +M+L++N +GL IE+WK+ + + + G K+ +Y+ SKTKE+D+IAT+HLL++ PL+ GY YSL++Q+HKGWYSW+L++LVGF+YMFGFVMMTPQLFINYKL+SVAH+ WR M+YK INTFIDDLFAF++ MP MHRLAC RDD++F VF YQRY Y D R NE+GQ A +++
Sbjct: 440 KSMEGLSLRSMVVNTFFQVVILLYLADNETNFMVLMSNGVGLLIEIWKISKAVKISFEGG-----------KIHWEEASSYKMSKTKEYDEIATSHLLFITMPLVAGYGLYSLVHQKHKGWYSWILNTLVGFIYMFGFVMMTPQLFINYKLQSVAHLNWRTMTYKSINTFIDDLFAFVIKMPIMHRLACLRDDVIFLVFCYQRYKYRTDYTRVNEFGQCAQPTDE 653
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Match: A0A1J3FQ35_NOCCA (CLPTM1-like membrane protein cnrB (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3FQ35_NOCCA) HSP 1 Score: 251 bits (642), Expect = 2.350e-81 Identity = 118/217 (54.38%), Postives = 164/217 (75.58%), Query Frame = 1
Query: 1 RSLEGISVRSMMVNLFFQSVIFLYLADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGGEDGQPRRRIPKVSVRAKETYRKSKTKEFDDIATAHLLYLIAPLMVGYAAYSLLNQQHKGWYSWVLSSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPTMHRLACFRDDIVFFVFLYQRYLYPVDRARRNEYG 651
+S+EG+S +S+++N Q +IFLYL DNDT++MIL ++ +G+ IE WK+G+ M +D G IP++ +E+Y +KTKE+DDIA L Y++ L+ G+A YSL ++HK WYSW+LSSL VYMFGF+MM PQLFINYKLKSVAH+PWR M+YKF+NT IDDLFAF++ MP +HRL+ FRDD++F ++LYQR++YPVD+ R NE+G
Sbjct: 1 KSMEGLSAKSVVLNFICQFIIFLYLLDNDTSWMILASSGVGVCIEFWKIGKAMRIEIDRSGL-------IPRLRFHDRESYASNKTKEYDDIAMKFLSYVVLLLVAGFAIYSLAYERHKSWYSWILSSLTSCVYMFGFIMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDLFAFVIKMPMLHRLSVFRDDVIFLIYLYQRWVYPVDKTRVNEFG 210
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Match: A0A662Y206_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y206_9STRA) HSP 1 Score: 253 bits (647), Expect = 6.290e-81 Identity = 126/225 (56.00%), Postives = 165/225 (73.33%), Query Frame = 1
Query: 1 RSLEGISVRSMMVNLFFQSVIFLYLADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGGEDGQPRRRIPKVSVRAKETYRKSKTKEFDDIATAHLLYLIAPLMVGYAAYSLLNQQHKGWYSWVLSSLVGFVYMFGFVMMTPQLFINYKLKSVAHMPWRVMSYKFINTFIDDLFAFIVPMPTMHRLACFRDDIVFFVFLYQRYLYPVDRARRNEYGQSATMSED 675
+SL G+S+R++ +N FFQ VIFLYL DNDT++MILV + I L I+VWK+ + +V D ED K+ + E+Y S T E D +A AHL +++ PL+VG AAY+L HKGWYSW++SSL FVY FGF+MMTPQL+INYKLKSVAH+PWR M YK +NTFIDDLFAF++ MP MHRL+CFRDD++FF+++YQR+ YPVD R NE+GQ E+
Sbjct: 39 KSLAGLSLRTIALNTFFQLVIFLYLMDNDTSWMILVQSGIALLIDVWKIKKAIVVSRD---EDN-------KLVISGVESYEDSPTAEHDRVAVAHLSFVLYPLIVGQAAYTLTYGVHKGWYSWIISSLTSFVYAFGFIMMTPQLYINYKLKSVAHLPWRAMVYKSLNTFIDDLFAFVIKMPWMHRLSCFRDDLIFFIYIYQRWKYPVDAKRTNEFGQGPVEEEE 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14820.3653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14820.3653.1 >prot_H-canaliculatus_F_contig14820.3653.1 ID=prot_H-canaliculatus_F_contig14820.3653.1|Name=mRNA_H-canaliculatus_F_contig14820.3653.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=218bp MMVNLFFQSVIFLYLADNDTTYMILVTNAIGLAIEVWKVGRFMVGRLDWGback to top mRNA from alignment at H-canaliculatus_F_contig14820:271..2047- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14820.3653.1 ID=mRNA_H-canaliculatus_F_contig14820.3653.1|Name=mRNA_H-canaliculatus_F_contig14820.3653.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1777bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14820:271..2047- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14820:271..2047- >mRNA_H-canaliculatus_F_contig14820.3653.1 ID=mRNA_H-canaliculatus_F_contig14820.3653.1|Name=mRNA_H-canaliculatus_F_contig14820.3653.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1308bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14820:271..2047- (Hapterophycus canaliculatus Oshoro5f female)back to top |