mRNA_H-canaliculatus_F_contig1482.3650.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1482.3650.1
Unique NamemRNA_H-canaliculatus_F_contig1482.3650.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Match: A0A6H5JQ06_9PHAE (HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ06_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 5.660e-96
Identity = 166/228 (72.81%), Postives = 184/228 (80.70%), Query Frame = 1 
Query:    1 QVLGSKPKGHYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFATLSDGDKRAHYDRYGDDDGPQGIGGXXXXVPFGRTHHHHGAELSPEDIFNMFFGQPPGARRRQG-----GFNTRVYRAGGGANGAAGNRGAQEGASGMNLMTLLGVIALMFFTLFAGGPQDAPFSLEKMGKYEYERYTTRKRGVVEGIKYFVPPKFRRTYASDPEQLRRV 669
            QVL SK KGHY VLGV+KGAN+DQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFA LSDGDKRAHYDRYGDDDGPQGIGG     PFGR H H+GAE+SPEDIFNMFFGQPPGARRRQG      FNTRVYRAGGG +   G    QEGA+GMNL+ LLG I LMF TLF G  Q+A FSLE+   Y+  + TT+++GVV GI YFV PKFR+ YA++ E+LRRV
Sbjct:  161 QVLTSKKKGHYDVLGVEKGANDDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFAVLSDGDKRAHYDRYGDDDGPQGIGGGQGGGPFGRGH-HYGAEVSPEDIFNMFFGQPPGARRRQGRGGMPSFNTRVYRAGGGVDRGGGGGNGQEGATGMNLLPLLGAIVLMFLTLFGGEQQEAAFSLERTSAYKIPKTTTQEKGVVGGIDYFVAPKFRQKYATNAERLRRV 387
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BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Match: D8LBV6_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV6_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 4.100e-94
Identity = 162/227 (71.37%), Postives = 180/227 (79.30%), Query Frame = 1 
Query:    1 QVLGSKPKGHYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFATLSDGDKRAHYDRYGDDDGPQGIGGXXXXVPFGRTHHHHGAELSPEDIFNMFFGQPPGARRRQG-----GFNTRVYRAGGGANGAAGNRGAQEGASGMNLMTLLGVIALMFFTLFAGGPQDAPFSLEKMGKYEYERYTTRKRGVVEGIKYFVPPKFRRTYASDPEQLRR 666
            QVL SK KGHY VLG++KGAN+DQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFA LSD DKRAHYDRYGD DGPQGIGG     PFGR H H+GAE+SPEDIFNMFFGQPPGARRRQG      FNTRVYRAGGG +   G    QEGA GMNL+ LLG I LMF TLF G  Q+A FSLE+   Y+  + TT+++GVV GI YFV PKFR+ YA++ E+LRR
Sbjct:  130 QVLNSKAKGHYDVLGIEKGANDDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFAVLSDADKRAHYDRYGDGDGPQGIGGGQGGGPFGRGH-HYGAEVSPEDIFNMFFGQPPGARRRQGRGGMPSFNTRVYRAGGGVDRGGGGGNGQEGAMGMNLLPLLGAIVLMFLTLFGGEQQEAAFSLERTSAYKVPKTTTQEKGVVGGIDYFVAPKFRQKYATNAERLRR 355
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BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Match: F0YIU4_AURAN (J domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIU4_AURAN)

HSP 1 Score: 169 bits (428), Expect = 2.990e-42
Identity = 108/224 (48.21%), Postives = 134/224 (59.82%), Query Frame = 1 
Query:    1 QVLGSKPKGHYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFATLSDGDKRAHYDRYGDDDG-PQGIGGXXXXVPFGRTHHHHGAELSPEDIFNMFFGQPPGARRRQGGFNTRVYRAGGGANGAAGNRGAQEGASGMNLMTLLGVIALMFFTLFAGGPQDAPFSLEKMGKYEYERYTTRKRGVVEGIKYFVPPKFRRTYASDPEQLRRV 669
            Q+L  K +GHY VLGV K A +D+IKKAYRKLAL+ HPDKN AP A EAF+ +G A+A LSDG+KRA YDRYGD+D  PQ    XXXX            ++SPEDIFNMFFG  PG  RRQ G   R Y        A       +    + L+ LL + AL FF+ +     ++PFSLE+ GKY  ER+T + RGV   I+Y+V   F   YA DP  L R+
Sbjct:  102 QILRLKNRGHYEVLGVSKSAGDDEIKKAYRKLALKFHPDKNRAPMADEAFKCVGLAYAVLSDGEKRASYDRYGDEDAAPQXXXXXXXXXXXXXX-----XDISPEDIFNMFFGVDPGRGRRQAG-PARAYPQ------ARRQPPPNQAQQLLQLLPLLLLFALSFFS-YPNQYAESPFSLERKGKYTVERFT-KSRGVTRDIRYWVGDGFSAKYARDPYSLARI 311
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BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Match: A0A835ZD03_9STRA (DnaJ subfamily B protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD03_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.080e-38
Identity = 106/257 (41.25%), Postives = 141/257 (54.86%), Query Frame = 1 
Query:   25 GHYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFATLSDGDKRAHYDRYGDDDGPQGIGGXXXXVPFGRTHHHHGAELSPEDIFNMFFGQPPGARRRQGGFNT------------RVYRAGGGANGAAGNRGAQEGASGMNLMTLLGVIALMFFTLFA-GGPQDAPFSLEKMGKYEYERYT-TRKRGVVEGIKYFVPPKFRRTYASDPEQLRRVGSFSWRCPAVLSTGLSASV*ARIVKRLR 753
            GHY VL ++K A +D IK++YRKLAL+ HPDKNGAP A EAF+AIG AFA LSD DKRA YDRYGDD+   G+ G    +  G  +   GAE+SPEDIFNMFFGQ  G   R GGF T            R + A   A    G R      S   L+ +L ++ +M F+L   GG  +A + LEK   Y   RYT ++ + V +G+ YFV   F   +    +  +   + + R   ++    S +V  R VK +R
Sbjct:  103 GHYEVLCIEKTATDDDIKRSYRKLALKFHPDKNGAPHAPEAFKAIGHAFAVLSDPDKRAAYDRYGDDEPANGLNGGGGGMHGGWAN-GRGAEVSPEDIFNMFFGQMAGGGMRAGGFRTYHGGYHNHPMYARPHPAARAARDGGGER------SWWGLVQMLPMLLMMVFSLMNFGGSGEAVYRLEKTPVYSQPRYTRSQAQNVKQGLPYFVKTDFLHQHKHRTQIYQVEQAVTARHLQIMQEQCSQAVGERKVKAMR 352
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BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Match: A0A4D9D2B9_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2B9_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.510e-35
Identity = 100/235 (42.55%), Postives = 135/235 (57.45%), Query Frame = 1 
Query:    4 VLGSKPKGHYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFATLSDGDKRAHYDRYGDDDGPQGIGGXXXXVPFGRTHHHHGAELSPEDIFNMFFGQPPGARRRQGGFNTRVYRAGGGANGA---------AGNRGAQEGASGM--NLMTLLGVIALMFFTLFAGGPQDAP--FSLEKMGKYEYERYTTRKRGVVEGIKYFVPPKFRRTYASDPEQLRRV 669
            ++ SK KGHY VL V + A +DQIKK+YRKLAL+ HPDKN APQA EAF+AI TAF  LSD DKR  YD++GDDDG +G+GG        + H    A++SPE+IFNMFFG   G R      N RVYR+                    G  +   G    ++ LL V+ L+F +LF+  PQ++   FSL +  ++  +R T+ +  ++  I YFV   F R YA D  +L +V
Sbjct:  117 IIQSKKKGHYEVLSVSRTATDDQIKKSYRKLALKFHPDKNAAPQADEAFKAISTAFQVLSDPDKRRSYDQFGDDDGTEGMGG--------QAHPFRHADVSPEEIFNMFFGVNGGGRPA----NFRVYRSHHDQRNPFFRYQQXXXXXXXGQAQPPLGALPQVLQLLPVLLLLFLSLFSF-PQESERAFSLHRTDRHPLQRSTSMEH-ILPNIPYFVGQSFGRDYARDRRRLFQV 337
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BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Match: A0A7S2DVK4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DVK4_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.360e-35
Identity = 98/239 (41.00%), Postives = 130/239 (54.39%), Query Frame = 1 
Query:    1 QVLGSKPKGHYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFATLSDGDKRAHYDRYGDDDGPQGIGGXXXXVPFGRTHHHHGAELSPEDIFNMFFG---------------QPPGARRRQGGFNTRVYRAGGGANGAAGNRGAQEGASGMNLMTLLGVIALMFFTLFAGGPQDAPFSLEKMGKYEYERYTTRKR-GVVEGIKYFVPPKFRRTYASDPEQLRRV 669
            Q++ +  KGHY VLGV K A ED +KKAY+KLAL+LHPDKN AP+A  AF+A+  A++ LSD +K+ HYD YG DD P     XX      R  +   ++++PEDIFNMFFG               Q P  RR++G    R   A             Q GA  +  M  L ++ LM F  +    QD PFSL + G Y ++R T++ R G  +GI+Y+V   F RTY  D  QL  V
Sbjct:   99 QIIAAGKKGHYEVLGVGKDATEDAVKKAYKKLALKLHPDKNSAPEAESAFKAVSMAYSVLSDSEKKRHYDLYGSDD-PSXXXXXXM-----RRQYSDPSDINPEDIFNMFFGGGAAFGNHGQFRAYRQHPMQRRQEG---QRQGEA------------PQNGAFQLLQMAPLILLLLMSFFSYPSVSQDPPFSLNRAGSYTHKRSTSQSRYGARQGIEYWVKENFSRTYGRDRYQLSSV 316
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BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Match: A0A8J2SL43_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL43_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.440e-35
Identity = 99/225 (44.00%), Postives = 125/225 (55.56%), Query Frame = 1 
Query:    1 QVLGSKPKGHYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFATLSDGDKRAHYDRYGDDDGPQGIGGXXXXVPFGRTHHH---HGAELSPEDIFNMFFGQPPGARRRQGGFNTRVYRAGGGANGAAGNRGAQEGASGMNLMTLLGVIALMFFTLFAGGPQDAPFSLEKMGKYEYERYTTRKRGVVEGIKYFVPPKFRRTYASDPEQLRR 666
            +V+ +K +GHYAVLG++K A+EDQIK+AYRKLAL+ HPDKN AP A EAF+ IG AFATLSD DKR HYD YGDD+   G+G     VP  R       +  E+SPEDIFNMF                                  Q+ A    L+ LL +  +MF    +G   D PFSL++  K+ +ER T R RGVV  I+Y+V   F   +A D   LRR
Sbjct:   87 KVIAAKRRGHYAVLGIEKTADEDQIKRAYRKLALKFHPDKNRAPDADEAFKCIGLAFATLSDKDKRRHYDMYGDDEPEPGMG-----VPRRRXXXXXXVYADEMSPEDIFNMFXXXXXXXXXXXXXXXXXXXXX---------QDWRQQVAQ---LIPLLFLCLIMFGN--SGSLYDPPFSLKRTAKFRHERLT-RSRGVVPDIRYYVADGFSAKHARDGYALRR 291
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BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Match: A0A7S2MCK3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MCK3_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.740e-34
Identity = 101/230 (43.91%), Postives = 122/230 (53.04%), Query Frame = 1 
Query:   28 HYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFATLSDGDKRAHYDRYGDDDGPQGIGGXXXXVPFGRTHHHHGAELSPEDIFNMFFGQP-PGARRRQGGFNTRVYRAGGGANGAAGNRGAQE--------GASGMNLMTLLGVIALMFFTLFAGGPQDAPFSLEKMGKY-------EYERYTTRKRGVVEGIKYFVPPKFRRTYASDPEQLRRV 669
            HY VLGV++ ANE  +KKAYRKLAL+LHPDKN AP A EAF+A+G A+ TLSD  KRA YDRYGD+D P   G        G  H  HG E+SPE+IFNMFFG   P      GG   RVY +G G   AA   GA++         A G+     L  + L+F   F   P D   S     +Y        +    + K   V+ I YFV  KF RTY  D  QL +V
Sbjct:    5 HYRVLGVEQDANEAALKKAYRKLALKLHPDKNSAPNADEAFKAVGLAYGTLSDSQKRAIYDRYGDED-PDNRGSAAGRP--GGVHFRHGEEMSPEEIFNMFFGGGMPAGMGGMGGPGFRVYGSGFGPGFAAHMGGARQRQRQQEAQNAGGIGQFAQLLPLLLLFVLSFFNLPGDDGSSHTGGSRYFSLTHSPPFVNPLSTKTTPVKDIPYFVTDKFMRTYYRDRYQLAQV 231
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BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Match: A0A7S2SSK5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSK5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.100e-34
Identity = 96/232 (41.38%), Postives = 126/232 (54.31%), Query Frame = 1 
Query:    1 QVLGSKPKGHYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFATLSDGDKRAHYDRYGDDDGPQGIGGXXXXVPFGRTHHHHGAELSPEDIFNMFFGQPPGARRRQGGFNTRVYRAG--------GGANGAAGNRGAQEGASGMNLMTLLGVIALMFFTLF-AGGPQDAPFSLEKMGKYEYERYTTRKRGVVEGIKYFVPPKFRRTYASDPEQLRRV 669
            +++ ++ KGHY VLGV   A +D+IKKAYRKLAL+LHPDKN AP A  AF+A+  A+  LSD +KR  YD YG DD       XXXX    R +     +++PEDIFNMFFG   G      G   RVYR+G        GG         AQ  A  M L+ L  +   +  ++F   G  ++PFSL++ G Y  +R T   RG+  GI+YFV   F + Y     QL  V
Sbjct:  103 RIMAAQAKGHYDVLGVGTKATDDEIKKAYRKLALKLHPDKNSAPGAEGAFKAVSMAYTVLSDSEKRRTYDLYGSDDPTNPSXXXXXXXXMHRRYAEQ--DINPEDIFNMFFGGGMGGFHHAQGPGFRVYRSGFPPRRQHPGGQQQXXXXXEAQGSAGLMQLLQLAPIFLFLVTSMFFPSGSYESPFSLQRSGGYAIQRATQDSRGIRGGIEYFVKESFAKNYGRTRRQLASV 332
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Match: W4H0R1_9STRA (J domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0R1_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.900e-33
Identity = 98/222 (44.14%), Postives = 123/222 (55.41%), Query Frame = 1 
Query:   22 KGHYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAFQAIGTAFATLSDGDKRAHYDRYGDDDGPQGIGGXXXXVPFGRTHHH---HGAELSPEDIFNMFFGQP-PGARRRQGGFNTRVYRAGGGANGAAGNRGAQEGASGMN-LMTLLGVIALMFFTLFA-GGPQDAPFSLEKMGKYEYERYTTRKRGVVEGIKYFVPPKFRRTYASDPEQLRRV 669
            K HY VLGV K A+E+++KKAYRKLAL+LHPDKN AP A +AF+A+G AF  LSD  KRA YDR+GD+       G        R  HH   H  ++SPEDIFNMFFG   P  R+RQ     R              +  Q   + M  L+  L +I ++  +LF+  G Q APFSL    +   +R TTR R VV GI Y+V   F R Y +D   L RV
Sbjct:  108 KTHYDVLGVAKNADENEVKKAYRKLALKLHPDKNSAPGAEDAFKAVGKAFTILSDDQKRADYDRFGDN-----APGENNSRQRSRQQHHGGFHDEDISPEDIFNMFFGGGMPRQRQRQXQAQPR-------------QQADQTPRTPMQQLLQFLPLILVLCLSLFSFPGNQTAPFSLNPTQEMPVQR-TTRMRNVVNGIPYYVARDFERKYTNDWRDLMRV 310
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1482.3650.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQ06_9PHAE5.660e-9672.81HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D8LBV6_ECTSI4.100e-9471.37Heat shock protein 40 like protein n=1 Tax=Ectocar... [more]
F0YIU4_AURAN2.990e-4248.21J domain-containing protein n=1 Tax=Aureococcus an... [more]
A0A835ZD03_9STRA3.080e-3841.25DnaJ subfamily B protein n=1 Tax=Tribonema minus T... [more]
A0A4D9D2B9_9STRA1.510e-3542.55J domain-containing protein n=2 Tax=Monodopsidacea... [more]
A0A7S2DVK4_9STRA2.360e-3541.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J2SL43_9STRA2.440e-3544.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2MCK3_9STRA1.740e-3443.91Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2SSK5_9STRA2.100e-3441.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W4H0R1_9STRA1.900e-3344.14J domain-containing protein n=7 Tax=Aphanomyces as... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1482contigH-canaliculatus_F_contig1482:827..7221 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score318.5
Seed ortholog evalue2.6e-84
Seed eggNOG ortholog2880.D8LBV6
KEGG koko:K09518
KEGG Pathwayko04141,map04141
EggNOG free text desc.protein folding
EggNOG OGsCOG0484@1,KOG0714@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Hectar predicted targeting categoryother localisation
Exons6
Model size3029
Cds size729
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929225.82227-CDS-H-canaliculatus_F_contig1482:826..9801622929225.82227-CDS-H-canaliculatus_F_contig1482:826..980Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1482 827..980 +
1696845725.048731-CDS-H-canaliculatus_F_contig1482:826..9801696845725.048731-CDS-H-canaliculatus_F_contig1482:826..980Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1482 827..980 +
1622929225.8375416-CDS-H-canaliculatus_F_contig1482:1633..17161622929225.8375416-CDS-H-canaliculatus_F_contig1482:1633..1716Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1482 1634..1716 +
1696845725.06107-CDS-H-canaliculatus_F_contig1482:1633..17161696845725.06107-CDS-H-canaliculatus_F_contig1482:1633..1716Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1482 1634..1716 +
1622929225.8556788-CDS-H-canaliculatus_F_contig1482:2470..26791622929225.8556788-CDS-H-canaliculatus_F_contig1482:2470..2679Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1482 2471..2679 +
1696845725.069732-CDS-H-canaliculatus_F_contig1482:2470..26791696845725.069732-CDS-H-canaliculatus_F_contig1482:2470..2679Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1482 2471..2679 +
1622929225.8707294-CDS-H-canaliculatus_F_contig1482:3525..36121622929225.8707294-CDS-H-canaliculatus_F_contig1482:3525..3612Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1482 3526..3612 +
1696845725.0785336-CDS-H-canaliculatus_F_contig1482:3525..36121696845725.0785336-CDS-H-canaliculatus_F_contig1482:3525..3612Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1482 3526..3612 +
1622929225.8871875-CDS-H-canaliculatus_F_contig1482:4130..43261622929225.8871875-CDS-H-canaliculatus_F_contig1482:4130..4326Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1482 4131..4326 +
1696845725.0882113-CDS-H-canaliculatus_F_contig1482:4130..43261696845725.0882113-CDS-H-canaliculatus_F_contig1482:4130..4326Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1482 4131..4326 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929225.9033089-UTR-H-canaliculatus_F_contig1482:4326..50351622929225.9033089-UTR-H-canaliculatus_F_contig1482:4326..5035Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1482 4327..5035 +
1696845725.0979288-UTR-H-canaliculatus_F_contig1482:4326..50351696845725.0979288-UTR-H-canaliculatus_F_contig1482:4326..5035Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1482 4327..5035 +
1622929225.9165163-UTR-H-canaliculatus_F_contig1482:5630..72211622929225.9165163-UTR-H-canaliculatus_F_contig1482:5630..7221Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1482 5631..7221 +
1696845725.10833-UTR-H-canaliculatus_F_contig1482:5630..72211696845725.10833-UTR-H-canaliculatus_F_contig1482:5630..7221Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1482 5631..7221 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1482.3650.1prot_H-canaliculatus_F_contig1482.3650.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1482 827..4326 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1482.3650.1

>prot_H-canaliculatus_F_contig1482.3650.1 ID=prot_H-canaliculatus_F_contig1482.3650.1|Name=mRNA_H-canaliculatus_F_contig1482.3650.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=243bp
QVLGSKPKGHYAVLGVDKGANEDQIKKAYRKLALRLHPDKNGAPQAHEAF
QAIGTAFATLSDGDKRAHYDRYGDDDGPQGIGGGGGGVPFGRTHHHHGAE
LSPEDIFNMFFGQPPGARRRQGGFNTRVYRAGGGANGAAGNRGAQEGASG
MNLMTLLGVIALMFFTLFAGGPQDAPFSLEKMGKYEYERYTTRKRGVVEG
IKYFVPPKFRRTYASDPEQLRRVGSFSWRCPAVLSTGLSASV*
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mRNA from alignment at H-canaliculatus_F_contig1482:827..7221+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1482.3650.1 ID=mRNA_H-canaliculatus_F_contig1482.3650.1|Name=mRNA_H-canaliculatus_F_contig1482.3650.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6395bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1482:827..7221+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTCCTGGGCTCGAAGCCGAAGGGACACTACGCCGTTCTTGGAGTGGA
CAAGGGGGCGAACGAAGACCAGATCAAAAAGGCCTACAGAAAGCTGGCGC
TGAGATTGCATCCGGACAAGAACGGGGCACCCCAGGCGCATGAGGCCTTC
CAAGGTGGGGGAAAGCGGCGGGAAAAGAGTGTGTGCCCGTAGGGCGGCCG
ACTCCACTGGCGTTTCGGTGGGCCGTTGGCGGGAGGCGCGCAGGACGGGA
AGTTGGCCTGCGTTAGTGGTTCAGTCCACGCGGAGTTTCTACGAGTATGA
GGTGGCGTTCGAATGACGAGCGACGGTGTAGGGTTTGCGGAGGCCGTCAG
CAACGGCCTCGCCCCGTCTGGTCTCTCGCAAGAATATCAGCCTCCGACGA
ACCTGGCTGGAGAGGCTCTCTTGGACACGTTGTTTCTGCACCAAGGTCCA
GGCAATCGTTGAAAATACCCCCCGCACCTAGGCCATTGGCCCGAACGTAC
TCGAAGTGTTGTGCATCAGAACTTTACTGTCAAGTTCAAGGTGATGACCC
TTGTGCTGGAGGGCTCCTCGTGTGAGGAGAGGGGGACATCGAAATGGTCC
AAGACGGAGCTCATAGCAGCTTACAGCAGTCGTCCAAACTAGACTCTCGA
AAGCGATCCCGTAGGATCTGCGAGACTGGGGGGCGTGTTTCGTTACCGGG
TAACCGCTCTCTGTAGTCCAGGCCCAAAATGCGCAACAGCGTTCTGTGTA
AGAATTCAACTGTTCGAGCGCCATGCTGCTGCCCTGCTGTCTCCCTCCTG
CCCTCAGCGATCGGAACGGCATTCGCCACGCTGAGCGATGGGGACAAGAG
AGCGCATTACGACCGTTACGGAGACGACGACGGCCCACAGGTGATACGAT
GTGATGTGCTGGACAAAAAGTGTGGCAAGGCTGGTGGTGGATGTGGTGTG
TTGGATGGTGTGAAGTGAAGGGTGAAGGTGTAGGAAACGCACATATGTGA
TGTGGTCGTACACTTTGACCATGCGAGATCTGGTGCTTGGTTCCCTCGCT
TGCTTTCTTCTTTCTCGATTGTGACTTCGCAGCCAGGCAAAGGGCCGCAA
ACAAATATTGGAAGGCATGATAAAAAAATGTGGGTCTCGTCCGACGCACA
GAATGTGACGCCTCTGTGCACGGTTCGTGTTGATGAGTTTGGTTGACTTG
CTCAAGAGGATAGGTCGCTTCTCGTTTGTCTTTGGATTGGTGGTGAGGGC
TGTTGTTAAAGTGTAGTAATTCCACTAATCGATTTGCGGACTTGGGTTGA
TAAATCTCTAGCCGGTATCTGCTTGCCCGAATGTTCATCGCGGCAAGGAT
CATGCCAGGCTGCTGGTCACGCTTCACCACACCGCTGTGAATCGTTGACT
GCGAGGTGTCTATCGCCCACACCGAGCATGGTCGTAAGGAAAGTGTCAAT
ATTCCACCCATGTGCTTCCTGCAGCGGCGCCTTGGGTGCGCACTCCCAGC
TGGCCGCCCTTGAGCAGAAGCCTCCCCTTCACCAACACCGTCGTGGCCCA
TGTGCTCTGCCGTCATGAGAACATTGCGACGTGCGATCGAAACTCGAAAA
TAGCGCATTTCTTTGAAGCGCCGATTCCTTCCCGTGTGACACAGGGGATC
GGCGGAGGCGGGGGGGGTGTCCCTTTCGGACGAACGCATCACCACCACGG
TGCCGAACTCTCGCCCGAGGACATCTTCAACATGTTCTTCGGTCAGCCAC
CGGGGGCACGCAGACGGCAGGGAGGGTTTAACACAAGGGTGTACAGGGCT
GGCGGTGGCGCGAACGGGGCGGCGGGCAACCGAGGGGCGCAGGAGGGAGC
ATCGTGAGTTGCTAGCGAGCCCTCGTGATGCTGTTAACGGTCTCGGCTAG
GCTGAATGCTAGACATTTGTTGTCGCGGTTGCTGTCGACTTTAGTGTTGA
TATCCTTGTTGTGGGGAAGTTTTCCGTCCACCACATCTGGTTTACGCGGG
ACGGTTTCGACGGTACTTTTCGAGATGGTGCAGGAGGCGGGAATGTGGTG
GAGCAGCGGCAGTGGGTATCTTGGTATGTTTCGGCTAGTGTCACAAATGC
GCGCGGCCAGCAAACGCTTGAGATTTTATCATGATACCCCTGGACGTATT
CGCTGGAGAGTCCGCGTGGATTCTCTCGAAAGGGTGTGGTGAAAAACCAA
GCGTGTGAACCCCATCCCATGATCTCACGCAGCCCCCCCTTTTTTTTTCT
TTTTCGTTACCGTCCATACCTCGCACATCAAAAAGCTTCGCGATTTAGAA
ATTTGCTCATCAATTTTTTTCTCGCCCGCATTGCACGTTGGCGTGGGAAA
AGTCGTACCTACCAGCTCTAGTTTTTCCGTCAAACCTGCGTTCTTTCTGC
ACTCATGCACGATGCATTTCTGATCAACCTCCTCTAATGCCCCCACGGTG
CGAAATTCAAACGCTCTGTCGTCAGCGGGAAGGACTCTGGGGGCGGGCAG
CGGGGTGCGTCCCACTGTTTTTGTCCGCTTGGTCGCGTTTCCTTCGAACG
GGTTGTACGACACCTGGGATGCGTTCCCGTTAAGCGGGTTGCCGAGAAGT
GTGTCGCTCAAAATTTTTTCTCTCCCTGTCTGTACCGCGCGCCTTTTGCT
GCCTCGGTTTGGCGGTGACCCTGCGCTGTGCAACCGTCGTCGATGTCAGG
GGGATGAACTTGATGACCCTTTTGGGAGTCATCGCGCTCATGTTCTTCAC
CCTGTTTGCCGGGGGGCCGCAAGACGCGCCTTTCAGGTACGCGCCGGTCT
CGATTGATCACGCCGGGCCCCTGTCGAGTTCGATTCCGATGTTGAATAAG
AGCTGTCCCAAGGACCACCCCTTGCCGAAGGCACCCGTTTCCCTTGTTCC
GTCCACGCGCGGAGATGCACGCACACGCACACGCATCGCTTGTGGTTCTA
AGGAATGCCTGCTTGTAACGCGGACCTTTTGATATCTGTTTTGGTTTTGA
TAGAAGGTACCAGCTCGCTTGCTCGGCGCTTGTTTCGTTTCGATTTCAGC
CACCCCTCCTCGGTCAAGGTACAGTGCTGTTCCTCCGGCATTACGGTCGT
CCGCAGCTCTTGCATACCCTGAGTTAGAAAATCGTCTCGCGAGACATGCG
GAGAAGGACCGCCCCGGTCGGGGTCGATTTCGCGCCATGTCCTCGGTGCA
CTTGATCCTCAGCCCACGGCAAAACTCGAGCCTCTCCCCTTGCCCCTTTC
CCGTTCCACCCGCCCTTGGCGTGTTCCTTTATTTGTTTTGTTGTGTCAAA
AAAGCCTCGAGAAAATGGGCAAGTACGAGTATGAACGATACACCACCCGA
AAGAGGGGCGTGGTCGAGGGGATCAAGTACTTCGTGCCGCCGAAGTTCCG
AAGGACATACGCCAGCGATCCGGAGCAGCTTAGGAGGGTAGGTTCCTTTA
GCTGGCGGTGTCCAGCGGTGCTCTCGACAGGCCTCTCGGCGTCCGTCTAG
GCACGGATCGTAAAGCGTTTGCGGTAGAAAACGAGTGTGCGGCCAGAGCT
GCAACAGACAGCCCTCTCAAGATTGGTGCGCTCTTCGACTTGATCAGTCC
CAGCGTCGAGACCCGGCAACTCCGTAAAAGGCTTCGATGATGTTCATGGC
GCTCGTTCGGTCTCCTGTGGCTTGGTGCCTCGTTTGGGTGTTTGTGGTCT
CTCTTCTTCATCGAAAGTTTTTCGACACTTGAAGAAGTGAGAGTTTTTGT
TTTTCTCCGGAGCGCGATGAGGGAGGGGTTCGACGAAATAGCTGGCAGCA
TCTTGTCACGATCTTTCCGACGCCGCCCGAATGTCAAGGATTGGTCCATT
TGCCTGCACCTTCGTGGCAGACGTCTCACGTCCTCGGTCGCCGACGGATG
CTTTCGTCGAGGACTGCTGGCGGAATGCTGGGCTTTGGGGTCCCGCAAAT
GTTACGATGTAGTGCGCTCACCACTTCACATGTGTGTTGCTTGCCCCCGC
GCGATAGCATCTCGGCGCCGGCGACGTTTTGTTTTGGTGGTACGAGTACT
GCTGTGCAGATTGTTGTTTTCGGCTCGCTCCTTGTTGACGTTCGTGGATT
CGACAACTGTGTGCCACAGGTGGAATCTACCGTTACTGAACACTACAAGC
GTAAGCTCGGGGTCGAGTGCTCCGAAATGCGACAACGAGTATACTCTCAA
TTGACCAAGGTGAGGAGGTGTTGTAAAAATCTGCATCGGTAGGCTCAGTT
TGGGGTCGATTGCTGCTACAGCCTTGAGCACACCGCTCTTTTTGTTGTTG
GTGTTGTTGTTGGTGTTGTTGTTGTTGTTATTGTCGTTGTTATTTCCATG
CTTCTGATATCCTGTGCCACTGCTTGTCATCGCCCCGCTGCCCTTCACCG
GTTGCTTGGTGTGCTGCGCGCGGTTTCGTTTGAACTTCGCTTCGACGGTT
GTTGCCGGCATGGCTCGTTTGTGGGACGGCGAACCGGCTTGCGTTCTGCG
TTAATGACCAGCGAGAGCGTTGCCGGCGACGCAGCACAAAAGCGAGCAGC
TGCGAGGTCCCCAAAGCTCGCGCATTCCCGCCAAGCTTCTTCTATCGTAG
ATGTCGTCTGCTGTCCCTCACGGGTTCGGCGTTTTAAGCGCTTGCGACGA
CACGCGAGGCAGACGCATCGACCTCTTCCGCCTGTCGGTGCATCGACACT
TACTCCACCGTTCTCAACCTAAGAGAGCCCCCCCTGCTCTCGTCCATGCT
TATATGTCGCGGGTGCTCGTCCATGCTCATGTGTCGCGGGTGGATGGACT
GCAGGCGAAGCAACGCAAGAGGAAGATGGACAAGGAGACCTACGACCAGG
TCATCCTCGAGATAGAGAATACCCTCCTACCCCCGTGCGAGGAGCATGCC
GACAAGTTCGGAGCGTTCCGGAAAATGTACTGATCCAAGCATGCGCACCT
ACACCACGGCACCGCTCGACGCTTTCGCTGGGCTGGTCTTCTCGACGAAG
CCTCCCCCCTTCTGAGGAATTCCAACTCGGCGTGAAACGCAGCAACACGC
TTCGGAGGGGGCGGTGGTCTACACCTTTTGGACTTCCCTGGGGGGATGAG
GCAGCGCGTCCTGCGCGTTGCGTTGAATCCACGGGAGAGATTGATCGGTT
TGCACTTGGCCCATTCCGTCGGTGACTGAGTAGCTTTACCGCTCGGGTTG
TCGGAATTTGCCTGCATTTTTTTTTTCGTGCGTGCCACATCTCTGCCGAG
TAGGGCTTGTCTTTGTCTGGGTTGGTTGAAGCACGGGAATGTGGTAGCTG
TCTCCGCGATGGACTCGAAGGGTGCCAGAGCAAACAAACGTGGGTCGCCC
AGCGCTGGCTGCTGGGAAGTCCGGTTTGCCCTTCTTGCGCAGCCTTTGTT
TCAACCCCGTCACGCCACGTCAAGGGGTCGAAAGTGTTGTCATGTTGTCA
TGGTAACCCCTGATCGCCGACCGCCAGCTGCGGTGAACCGCAAGTTACGA
CCCGTTCATGTCTACTATACCAGGCCCGAGAATATGGAACAAAGGAGAGC
GATGAACGCCTCGCCCCCCGAAAAGCAGTAGCTCCACTGACCGTATGCGG
GATATACTAACTGCAATATGCATCCTTAGAAGTACACTTTTCTCCCAAGG
GCCACTCGTTTCTACCGTACTTGAAGCAAGGACTCTTCTCAAAGTCCCGT
GATCATCGTTGTGTGGCCCTCATCGTTGCTCACGAGAATGCAACTACCTT
GATGACTGGAGTGCCAAATCTCCTGCCACAACCGGTTGGTGTACAGTCTG
CCGCGGCAACGAGTGGCGTATGCGAAGCGAATTTCTACCTTCCTGGCCGT
TGTGCACAACTGGAACGCTGGCGAAGACGCGCTGTCTCGTGTGACCGCCC
CCCTTTTACACACCGGCCAAGTGCCAGCCATACTCGAGTGAGGTGAACTC
TCCCCGGTGAAGTAACCCACTTGCAAAACTTTGGCCCGCGAAGATGCTAC
GCGGGTGTTAAATGAAAAGTGGTGATAGAAGTGGTCAGAGTTCTCATAAT
GCCCAACAGCGTGCAACCGCGTGGAATGTTCATGGCGCGAAACGTGTTTC
CAACATGTAAACCCCTTGGATGGTCGCATACTTCAGTCTTGTTCGCGGGA
AACGAAGGACGAGCAGAATTTGAAAAGCATTGAATTGCCGGACAGCATTT
GAGTATACCGGTAGTCCACACCTCGGACTTGACATTAAAAACACCGAGGA
ATCGCCGTGCCCGCAGTCATGCACCTTTTAGATTAAACACTTCGCCGGTC
CGCACTCCCTTGCCTGCATCCGCAATGAATCAAGAGACAGGAATCCGTTA
CCACCCTGTCTGTTCTGGTTCCTTTACAGTATACGCAGTACGCAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1482:827..7221+

>mRNA_H-canaliculatus_F_contig1482.3650.1 ID=mRNA_H-canaliculatus_F_contig1482.3650.1|Name=mRNA_H-canaliculatus_F_contig1482.3650.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1458bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1482:827..7221+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTCCTGGGCTCGAAGCCGAAGGGACACTACGCCGTTCTTGGAGTGGA
CAAGGGGGCGAACGAAGACCAGATCAAAAAGGCCTACAGAAAGCTGGCGC
TGAGATTGCATCCGGACAAGAACGGGGCACCCCAGGCGCATGAGGCCTTC
CAAGCAGGTCCTGGGCTCGAAGCCGAAGGGACACTACGCCGTTCTTGGAG
TGGACAAGGGGGCGAACGAAGACCAGATCAAAAAGGCCTACAGAAAGCTG
GCGCTGAGATTGCATCCGGACAAGAACGGGGCACCCCAGGCGCATGAGGC
CTTCCAAGCGATCGGAACGGCATTCGCCACGCTGAGCGATGGGGACAAGA
GAGCGCATTACGACCGTTACGGAGACGACGACGGCCCACAGCGATCGGAA
CGGCATTCGCCACGCTGAGCGATGGGGACAAGAGAGCGCATTACGACCGT
TACGGAGACGACGACGGCCCACAGGGGATCGGCGGAGGCGGGGGGGGTGT
CCCTTTCGGACGAACGCATCACCACCACGGTGCCGAACTCTCGCCCGAGG
ACATCTTCAACATGTTCTTCGGTCAGCCACCGGGGGCACGCAGACGGCAG
GGAGGGTTTAACACAAGGGTGTACAGGGCTGGCGGTGGCGCGAACGGGGC
GGCGGGCAACCGAGGGGCGCAGGAGGGAGCATCGGGATCGGCGGAGGCGG
GGGGGGTGTCCCTTTCGGACGAACGCATCACCACCACGGTGCCGAACTCT
CGCCCGAGGACATCTTCAACATGTTCTTCGGTCAGCCACCGGGGGCACGC
AGACGGCAGGGAGGGTTTAACACAAGGGTGTACAGGGCTGGCGGTGGCGC
GAACGGGGCGGCGGGCAACCGAGGGGCGCAGGAGGGAGCATCGGGGATGA
ACTTGATGACCCTTTTGGGAGTCATCGCGCTCATGTTCTTCACCCTGTTT
GCCGGGGGGCCGCAAGACGCGCCTTTCAGGGGGATGAACTTGATGACCCT
TTTGGGAGTCATCGCGCTCATGTTCTTCACCCTGTTTGCCGGGGGGCCGC
AAGACGCGCCTTTCAGCCTCGAGAAAATGGGCAAGTACGAGTATGAACGA
TACACCACCCGAAAGAGGGGCGTGGTCGAGGGGATCAAGTACTTCGTGCC
GCCGAAGTTCCGAAGGACATACGCCAGCGATCCGGAGCAGCTTAGGAGGG
TAGGTTCCTTTAGCTGGCGGTGTCCAGCGGTGCTCTCGACAGGCCTCTCG
GCGTCCGTCTAGCCTCGAGAAAATGGGCAAGTACGAGTATGAACGATACA
CCACCCGAAAGAGGGGCGTGGTCGAGGGGATCAAGTACTTCGTGCCGCCG
AAGTTCCGAAGGACATACGCCAGCGATCCGGAGCAGCTTAGGAGGGTAGG
TTCCTTTAGCTGGCGGTGTCCAGCGGTGCTCTCGACAGGCCTCTCGGCGT
CCGTCTAG
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