mRNA_H-canaliculatus_F_contig14710.3599.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Match: D8LF87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF87_ECTSI) HSP 1 Score: 226 bits (575), Expect = 2.840e-66 Identity = 99/113 (87.61%), Postives = 109/113 (96.46%), Query Frame = 1
Query: 1 SLAPQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSMDTATDQNDLFVRSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVPLGPRTKAWKFPYLTVQV 339
SLAPQGQLRCW+D+MS++DAR FPPDDVSLPPN DFE+RVVFWKCKDVV+MDT T+QNDLFV+SWVEGCDAQETDTHWFAKKGKGSFNWRMKFKV LGPRT+AWKFPYLTVQ+
Sbjct: 1792 SLAPQGQLRCWLDIMSAEDARAFPPDDVSLPPNRDFEVRVVFWKCKDVVAMDTVTEQNDLFVKSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVSLGPRTRAWKFPYLTVQL 1904
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Match: D8LF91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF91_ECTSI) HSP 1 Score: 175 bits (444), Expect = 1.250e-48 Identity = 77/113 (68.14%), Postives = 95/113 (84.07%), Query Frame = 1
Query: 1 SLAPQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSMDTATDQNDLFVRSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVPLGPRTKAWKFPYLTVQV 339
S APQG L+CWVD+M DA+ FPP DV+LPP+++FE+R+V WKCKDVV+MD A+ NDLFV+SW+EGCD ETDTHW AK GKGSFNWRMKF+V LGPR ++ KFPYLT+Q+
Sbjct: 1351 SNAPQGMLQCWVDIMPPGDAKGFPPADVALPPDVEFEVRLVIWKCKDVVAMDFASGLNDLFVKSWLEGCDPLETDTHWRAKGGKGSFNWRMKFRVILGPRARSSKFPYLTLQM 1463
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Match: A0A6H5JL55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL55_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.110e-47 Identity = 76/112 (67.86%), Postives = 93/112 (83.04%), Query Frame = 1
Query: 1 SLAPQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSMDTATDQNDLFVRSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVPLGPRTKAWKFPYLTVQ 336
S APQG L+CWVD+M DA+ FPP DV+LPP+++FE+R+ WKCKDVV+MD A+ NDLFV+SW+EGCD ETDTHW AK GKGSFNWRMKF+V LGPR ++ KFPYLT+Q
Sbjct: 1733 SNAPQGMLQCWVDIMPPGDAKGFPPADVALPPDVEFEVRLGIWKCKDVVAMDFASGLNDLFVKSWLEGCDPLETDTHWRAKGGKGSFNWRMKFRVMLGPRARSSKFPYLTLQ 1844
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Match: A0A7S3XXD1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXD1_HETAK) HSP 1 Score: 150 bits (378), Expect = 3.810e-41 Identity = 70/113 (61.95%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 1 SLAPQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSMDTATDQNDLFVRSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVPLGPRTKAWKFPYLTVQV 339
S APQGQL CWVDV+ +A FP DDV+LP + FE+RVV WK KD VSM+ T ND+F + W EG D QETDTHW AK GK SFNWRMKF V LG +A KFPYL VQ+
Sbjct: 254 STAPQGQLTCWVDVLRPAEAAVFPADDVALPAAMVFEVRVVVWKTKDCVSMEALTHMNDMFAKVWAEGADKQETDTHWRAKGGKASFNWRMKFDVLLGHNARAMKFPYLHVQL 366
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Match: A0A7S1TTJ4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTJ4_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.930e-40 Identity = 70/112 (62.50%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 10 PQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSMDTATDQN--DLFVRSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVPLGPRTKAWKFPYLTVQV 339
PQG L CWVD+M +A FPPDDV+LPP DFE+RVV WK V D QN D++ R WVEG ++QETDTHW AK+GKGSFNWRM+F V LGPR KA+KFPYL VQ+
Sbjct: 325 PQGDLECWVDIMPPGEAAAFPPDDVALPPAQDFEVRVVVWKTAKVPPQDLLGGQNMTDMYARVWVEGAESQETDTHWRAKRGKGSFNWRMRFPVRLGPREKAFKFPYLHVQL 436
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Match: A0A7S1U2G6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2G6_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.100e-38 Identity = 67/112 (59.82%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 10 PQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSMDTATDQN--DLFVRSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVPLGPRTKAWKFPYLTVQV 339
PQG L CWVD+M +A +PPDDV+LPP +FE+RVV WK +V DT QN D+F + WVEGCD QETDTHW AKKGKGSFNWRMKF + LG KFPYL Q+
Sbjct: 277 PQGNLECWVDIMQPHEASAYPPDDVALPPRQEFEVRVVVWKLANVPPADTLGGQNMTDMFCKVWVEGCDVQETDTHWRAKKGKGSFNWRMKFDIELGHGAHVSKFPYLHFQL 388
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Match: A0A7S3JSY6_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSY6_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.040e-37 Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 1 SLAPQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSMDTATDQNDLFVRSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVPLGPRTKAWKFPYLTVQ 336
S QGQL CWVD+++ +A FPPDDVSLPP L E+RVV WK +D+V+MDT T+ NDL+++ +E +AQ TD HW AK GKGSFNWRMKF V LG TK +FP+L +Q
Sbjct: 1596 SAQEQGQLECWVDILTPAEASTFPPDDVSLPPKLKAEVRVVVWKARDMVNMDTITNMNDLYIKCQMEDTEAQCTDIHWRAKGGKGSFNWRMKFDVELGHNTKVMRFPHLKIQ 1707
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Match: A0A3M6VD74_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD74_9STRA) HSP 1 Score: 140 bits (353), Expect = 2.310e-36 Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 1 SLAPQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSMDTATDQNDLFVRSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVPLGPRTKAWKFPYLTVQ 336
S AP G ++ W+D++S A +PP D+SLPP +D E+RVV WK ++V S DT D NDLF R W+EG D QETD HW AKKGKGSFNWRMKF + LG + K PY VQ
Sbjct: 1459 SRAPMGTIKLWIDILSPAQAHDYPPIDISLPPPVDMELRVVVWKARNVPSFDTMEDMNDLFFRCWMEGSDYQETDIHWRAKKGKGSFNWRMKFPITLGHKQTNTKIPYFHVQ 1570
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Match: M4BQ73_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQ73_HYAAE) HSP 1 Score: 139 bits (351), Expect = 4.300e-36 Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 1 SLAPQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSMDTATDQNDLFVRSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVPLGPRTKAWKFPYLTVQ 336
S AP G ++ W+D++S A +PP D+SLPP +D E+RVV WK ++V S DT D NDLF R W+EG D QETD HW AKKGKGSFNWRMKF + LG + K PY +Q
Sbjct: 1459 SQAPMGTIKLWIDILSPAQAHDYPPIDISLPPPVDMELRVVVWKARNVPSFDTLEDMNDLFFRCWMEGSDYQETDIHWRAKKGKGSFNWRMKFLITLGHKQTNTKIPYFHIQ 1570
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Match: A0A6G0WJX2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJX2_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.870e-36 Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 1 SLAPQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSMDTATDQNDLFVRSWVEGCDAQETDTHWFAKKGKGSFNWRMKFKVPLGPRTKAWKFPYLTVQV 339
S AP GQL+ W+D+++ DA +PP D++LPP + FE+RVV WK K+V + D T+ NDLFVR +EG D+Q+TD HW AKKGK SFNWRMKF V LG + KFPY +Q+
Sbjct: 1492 SRAPMGQLKLWIDILTPKDAAAYPPVDIALPPPITFELRVVIWKTKEVPNFDELTEMNDLFVRCQLEGSDSQDTDIHWRAKKGKASFNWRMKFPVTLGHKQHNSKFPYFKMQM 1604 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14710.3599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14710.3599.1 >prot_H-canaliculatus_F_contig14710.3599.1 ID=prot_H-canaliculatus_F_contig14710.3599.1|Name=mRNA_H-canaliculatus_F_contig14710.3599.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=113bp SLAPQGQLRCWVDVMSSDDARFFPPDDVSLPPNLDFEIRVVFWKCKDVVSback to top mRNA from alignment at H-canaliculatus_F_contig14710:312..1812- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14710.3599.1 ID=mRNA_H-canaliculatus_F_contig14710.3599.1|Name=mRNA_H-canaliculatus_F_contig14710.3599.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1501bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14710:312..1812- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14710:312..1812- >mRNA_H-canaliculatus_F_contig14710.3599.1 ID=mRNA_H-canaliculatus_F_contig14710.3599.1|Name=mRNA_H-canaliculatus_F_contig14710.3599.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=678bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14710:312..1812- (Hapterophycus canaliculatus Oshoro5f female)back to top |