prot_H-canaliculatus_F_contig1466.3574.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1466.3574.1
Unique Nameprot_H-canaliculatus_F_contig1466.3574.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length1111
Homology
BLAST of mRNA_H-canaliculatus_F_contig1466.3574.1 vs. uniprot
Match: D7FRN2_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN2_ECTSI)

HSP 1 Score: 660 bits (1702), Expect = 4.390e-208
Identity = 424/820 (51.71%), Postives = 491/820 (59.88%), Query Frame = 0
Query:  329 PLSLSAEVGS--GEPPGKLDEWALALGGALASDTQLIDAVSKGKHGVVLSLGEDPARVFEPTVVDFGDVATIASAGKGGDHRGG------ADAADGKVTERSSREWGAPA------GAGGDVRYSDGGRALSHGGXXXXXXXXMGMQEEDSYLPQGYNFSSERRAVMHANQPSANWASSSATXXXXXXXXXXXXXXXXXXXXXEEVEDDVGVASISFGNFEGRPANSNTAGGW-----GASHKGESGGSAGGANGDRSLRTTAEDSXXXXXXXXXIDGGGPQGDAGAGEE---------------APPLVRTLALSNFGDRPAFLQDLRLMPKDDPGRGLPPFAVRIGDELDSSLLHTQEKGGGGRRRYSLMPGTHLAVEVEFKRQKEAGFCGKWLTLTLGMVDPPPPGHPLLNLVDRVERTFVLGTRLLAQAVDGSAAAVLNAEARRFLPLAHREWFKHSIKGVVDIPRGKNPFHLPLLKALDILEYEVPEAVRKRFILGAESKVPWLVRDPREIMDLAGVEVGPGRLDDYVARFTALMWLEESQMSWDVHQYDLHDVKISLDSSRYREADASTSIVARVEVPGVLESRPRLAIGDVVRLRPPAAQTPEAFPAASKTRRTTGXX------GVVGPDDADGSNRKEENGPDFEVQALVSNVSLSTGTVTLLLPHPGVLNTFAAAADSKAGLSPGSGPELYAQTIAETVERARADNKSSGGGRNT--REEAPLHGWHCKFQLERHGLQFIHHALNGLLTFGDAVEDAAEPGPLRYLFPEPEMLPKAPVWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQ 1106
            PL L + VG   G    KLD+W ++LGGALAS+T++ D V+KGK+GVVLSLGEDP    EP VVDFGDVAT+  + + G   GG      A+  + +  ER S EWGA        GAG      +G + L +GG           +E+  YLPQGYNFS ERRAVMH  Q           XXXXXX                +VE      SISFG+FEGR A+      W             GGS G    D  + +   D+               +GD   GEE                  +VRTL L+NF +R  FL+DLRLMP+DD GR  PPF VRIG+ELDSSL HTQE+ GG RRRYSL PGTHL VEVEF RQ +AGFCGKWLTL L +VDP PP  PLL+LVDRVERTFVLGTRLLAQAVDG AAAVL+AEARRFLP AHREWFK+ +KGVV  PR  NPF+LP L++LD+LE+EVPEAV+KRF+ GAES+VPWLVRD REIM LAGVEVGPGRLDDYVAR++ALMWLEESQMSWDVHQYDLHDV+++LDSSRYRE D ST+IV RVEVPGVLESRPRLA+GDVVRLRPPA    +A   A K  +  G         VV  D  DGS++K  N PDFEVQ                                        G ELYA+TIA  V+ ARA  +++G       +EEA + GWHC+FQLERHGLQ                                         PLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQ
Sbjct:   79 PLPLGSSVGDDLGHVSSKLDQWTVSLGGALASNTEVCDYVTKGKYGVVLSLGEDP----EPPVVDFGDVATVVPSPREGGRGGGRGQQPLAENGEDQAAERPS-EWGATQHDDSVWGAGWG---QNGQQTLGNGGMQGREDRDE-EEEDGEYLPQGYNFSRERRAVMHPKQ--------QXXXXXXXXRGRGQDGVTGSTGGAAKVES---TPSISFGDFEGRAAH------WEDEXXXXXXXXXXGGSTGSGKDD--VASGPGDAFSPR-----------KGDTQMGEEEGGEXXXXXXXXXXDVASVVRTLELNNFSNRRVFLEDLRLMPRDDAGRA-PPFIVRIGNELDSSLRHTQEEEGG-RRRYSLAPGTHLEVEVEFNRQNQAGFCGKWLTLALSVVDPSPPNQPLLHLVDRVERTFVLGTRLLAQAVDGRAAAVLSAEARRFLPAAHREWFKNPVKGVVATPRANNPFYLPRLRSLDVLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGVEVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPSTNIVGRVEVPGVLESRPRLAMGDVVRLRPPA----QAKAGAKKVSKANGQHWNGGVGDVVSADGTDGSHQKLGNAPDFEVQ----------------------------------------GSELYAKTIARAVKAARASVQAAGXXXXXXXKEEAAMDGWHCRFQLERHGLQ-----------------------------------------PLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQ 772          
BLAST of mRNA_H-canaliculatus_F_contig1466.3574.1 vs. uniprot
Match: A0A6H5KSW5_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSW5_9PHAE)

HSP 1 Score: 481 bits (1238), Expect = 9.710e-150
Identity = 267/414 (64.49%), Postives = 304/414 (73.43%), Query Frame = 0
Query:  715 RTFVLGTRLLAQAVDGSAAAVLNAEARRFLPLAHREWFKHSIKGVVDIPRGKNPFHLPLLKALDILEYEVPEAVRKRFILGAESKVPWLVRDPREIMDLAGVEVGPGRLDDYVARFTALMWLEESQMSWDVHQYDLHDVKISLDSSRYREADASTSIVARVEVPGVLESRPRLAIGDVVRLRPPAAQTPEA--FPAASKTRRTTGXXGVVGPDDADGSNRKEENGPDFEVQALVSNVSLSTGTVTLLLPHPGVLNTFAAAADSKAGLSPGSGPELYAQTIAETVERARADNKSSGGGRNTREEAPLH-----------------GWHCKFQLERHGLQFIHHALNGLLTFGDAVEDAAEPGPLRYLFPEPEMLPKAPVWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQAST 1109
            R   LG RLLAQAVDG AAAVLNAEARRFLP AHREWFK  +KGVV  PR  NPF+LP L++L++LE+EVPEAV+KRF+ GAES+VPWLVRD REIM LAGV+VGPGRLDDYVAR++ALMWLEESQMSWDVHQYDLHDV+++LDSSRYRE D ST +V R+EVPGVLESRPRLAIGDVVRLRPPA   P A     A+   R  G  GVV  D  DGS++K  N PDFEVQALVSNVSLS G VTLLLPHPG L    AA+ S AG       ELYA+TIA  V+ ARA  +++  G      A +                  G  C+        +FIHHALN L+ F D+V  ++   PLRYLFPEP+MLP+ P+WPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQAST
Sbjct:   78 RLICLG-RLLAQAVDGRAAAVLNAEARRFLPAAHREWFKCPVKGVVATPRANNPFYLPRLRSLEVLEFEVPEAVQKRFLQGAESRVPWLVRDHREIMALAGVKVGPGRLDDYVARYSALMWLEESQMSWDVHQYDLHDVRVTLDSSRYREGDPSTVVVGRLEVPGVLESRPRLAIGDVVRLRPPAQAIPGAKKVSEANGQHRNGGVGGVVSADGTDGSHQKLGNAPDFEVQALVSNVSLSQGVVTLLLPHPGSLT---AASSSTAG------SELYAKTIARAVKAARASKQAAXXGGXXXAAAAVRTRRRLRWTDGTAGFSWSGMACR--------RFIHHALNRLVMFEDSVSGSS---PLRYLFPEPDMLPETPLWPLPESSFEWVMPSTNDSQRTAVRDIVTGAHGQAST 470          
BLAST of mRNA_H-canaliculatus_F_contig1466.3574.1 vs. uniprot
Match: A0A6H5L991_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L991_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.470e-22
Identity = 150/517 (29.01%), Postives = 188/517 (36.36%), Query Frame = 0
Query:   14 QQQPVFFRQQSAPPSVRVGVGTMPAQTASVMNP----------------SMGGYPQSLIGAVGHAHPEGVAPLSNKEWPSLQAAVASAVPGVAPTGGVRTLPSPAPVQGPAAGGTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPFLQHHLHQ----GXXXXXXXXXXXXXXXXXVPQQHQELGHMQTMPTMVSPGPPVFNQFPGGGDFQQAGLAQGLMHSQHQXXXXXXXXXXXXXXXXXXXXXXQLHPHHGEKPQQQSFQGQMVGVGQPQGSYMAQLPGPPIAVASLGPMQPE-------------------------AGGAPFVSTGQTPQQQILAGNPAPGSAPAMVGVSSSSPLSLSAEVGSGEPPGKLDEWALALGGALASDTQLIDAVSKGKHGVVLSLGEDPARVFEPTVVDFGDVATIASAGKGGDHRGGA-----------DAADG----KVTERSSREWGAPAGAGGDVRYSDGGRALSHGGXXXXXXXXMGMQEEDSYLPQG 470
            Q  P  F+QQS P +     G    Q   V  P                ++   P + +   G   P    PL ++ WPSLQAA AS  PG    G  R L SP P  G                                     QP +QHH  Q                      +PQQ Q+L      P+ +  GP +FNQ P    FQ  G+  G++  Q Q                                 QQ FQGQMVG  Q    YMAQLPG        GP   E                         A GA   +    P +   AG+P    +PA  G     PL  S    SG    KLD W ++LGGALAS+T++ D V+KGK+GVVLSLGEDP    EP VVDFGDVAT+  + + G   GG             AA G    + T+ +   WGA  G  G     +GG      G           +E+  Y+P G
Sbjct:   10 QHHPALFQQQSGPLAAIGVAGAAALQNTMVAYPRQPLPATRGPAVVTSRALLAAPGAAVRGPGSPSP----PLPHEGWPSLQAATASLAPGATVGGLPRALASPPPPPG--------------VIDIDGACQQYQRQPHQAPSMQMQPHMQHHHQQVRMQPYLPLQQVFPQHQRQMRPIPQQQQQL----MPPSSIPMGPAMFNQ-PPTHHFQHVGMTPGVVPIQQQ---------------------------------QQPFQGQMVGPSQD--LYMAQLPGGAQMGRDQGPAANEQHTKWTLKLHRRRIAVLKKRRRAEVATGAQPAAGAPRPGETDGAGSP--NCSPASPGGFRPLPLGSSVGDDSGHVSSKLDRWTVSLGGALASNTEVCDYVTKGKYGVVLSLGEDP----EPPVVDFGDVATVVPSPREGRKGGGRGQQPLAENGQDQAAKGPSEWEATQHADSVWGAGWGQDGQPTLGNGGMQGREDGDEE--------EEDGEYVPHG 454          
BLAST of mRNA_H-canaliculatus_F_contig1466.3574.1 vs. uniprot
Match: A0A4D9D490_9STRA (RNA helicase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D490_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 3.280e-17
Identity = 97/334 (29.04%), Postives = 150/334 (44.91%), Query Frame = 0
Query:  605 RTLALSNFGDRPAFLQDLRLMPKDDPGRGLPPFAVRIGDELDSSLL--------------HTQEKGGGGRRRYSLMPGT---HLAVEVEFKRQKEAGFCGKWLTLTLGMVDPPP--PGHPLLNLVDRVERTFVLGTRLLAQAVDGSAAAVLNAEARRFLPLAHREWFKHSIKGVVDIPRGKNPFH-LPLLKALDIL-EYEVPEAVRKRFILGAESKVPWLVRDPREIMDLAGVEVGPGRLDDYVARFTALMWLEESQMSWDVHQYDLHDVKISLDSSRYREADA---STSIVARVEVPGVLESRPRLAIGDVVRLRPPAAQTPEAFPAASKTRR 914
            R L + N    P  L+++ ++PKD+         V +G  + SS                  +EK   G     L  GT   H+ ++VE   + E+    KW+   L  ++ P   P H      D    +FVLG +++A   D +A A+LN EAR F+P   R +F      +V  P   +PF  + +   L  L +Y +P+ +R+ F+    +K+     +  +   L G+   P  + +Y     A+++LEE+Q   DV +YDL  V I+     YRE      +  +VA + VPG  E RP LA GD VRLRP       + PA    RR
Sbjct:  106 RLLRIVNDCPGPYVLREVLILPKDETTSACW-IEVEVGGWIFSSQSGRMPWKRSLREMSPSREEKFWTGAPEILLCFGTSDAHVTIKVE--PESESRIVKKWV---LFRIETPGMGPAH------DFQYHSFVLGRKVVASVADRAAQALLNVEARAFVPQGLRRYFDEPCN-MVSHPDEPSPFQPVGMANVLRYLPDYFLPDDIRRAFLGFKAAKLS----ERSDPYSLFGIVKSPTTVLEYCRNMRAMLYLEEAQAGEDVRRYDLFGVPIT-----YREKSKDKPNAPLVATISVPGAAEKRPPLAYGDCVRLRP------SSLPAIGSGRR 411          
BLAST of mRNA_H-canaliculatus_F_contig1466.3574.1 vs. uniprot
Match: W7TFX9_9STRA (Rna helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFX9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 7.790e-17
Identity = 97/334 (29.04%), Postives = 149/334 (44.61%), Query Frame = 0
Query:  605 RTLALSNFGDRPAFLQDLRLMPKDDPGRGLPPFAVRIGDELDSSLL--------------HTQEKGGGGRRRYSLMPG---THLAVEVEFKRQKEAGFCGKWLTLTLGMVDPPP--PGHPLLNLVDRVERTFVLGTRLLAQAVDGSAAAVLNAEARRFLPLAHREWFKHSIKGVVDIPRGKNPFH-LPLLKALDIL-EYEVPEAVRKRFILGAESKVPWLVRDPREIMDLAGVEVGPGRLDDYVARFTALMWLEESQMSWDVHQYDLHDVKISLDSSRYREADA---STSIVARVEVPGVLESRPRLAIGDVVRLRPPAAQTPEAFPAASKTRR 914
            R L + N    P  L+++ ++PKD+         V +G  + SS                  +EK   G     L  G    H+ ++VE   + E+    KW+   L  ++ P   P H      D    +FVLG +++A   D +A A+LN EAR F+P   R +F      +V  P   +PF  + +   L  L  Y +P+ +R+ F+    +K+     +  +   L G+   P  + +Y     A+++LEE+Q   DV +YDL  V I+     YRE      +T +VA + VPG  E RP LA GD VRLRP       + PA    RR
Sbjct:  297 RLLRIVNDCPGPYVLREVLILPKDETTSACW-IEVEVGGWIFSSQSGRMPWKCSLREMSPSREEKFWTGAPEILLCFGISDAHVTIKVE--PESESRIVKKWV---LFRIETPGMGPAH------DFQYHSFVLGRKVVASVADRAAQALLNVEARAFVPQGLRRYFDEPCN-MVSHPDEPSPFQPVGMANVLRYLPHYFLPDDIRRAFLGFRAAKLS----ERSDPYALFGIVKSPTTVLEYCRNMRAMLYLEEAQAGEDVRRYDLFGVPIT-----YREKSKDKPNTPLVATISVPGAAEKRPPLAYGDCVRLRP------SSLPAIGSGRR 602          
BLAST of mRNA_H-canaliculatus_F_contig1466.3574.1 vs. uniprot
Match: A0A835YTD6_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD6_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 8.100e-14
Identity = 102/329 (31.00%), Postives = 134/329 (40.73%), Query Frame = 0
Query:  814 AGVEVGPGRLDD------YVARFTALMWLEESQMSWDVHQYDLHDVKISLDSSRYREADASTSIVARVEVPGVLESRPRLAIGDVVRLRPPAAQTPEAFPAASKTRRTTGXXGVVGPDDADGSNRKE-----ENGPDFEVQALVSNVSLSTGTVTLLLPHPGVLNTFAAAADSKAGLSPGSGPELYAQTIAETVERARADNKSSGG----------GRNTR-----------------EEAPLHGWHCKFQLERHGLQFIHHALNGLLTFGDAVEDAAEPGPLRYLFPEPEMLPKAPVWPLPESSFEWVMPSTNDSQRTAVRDIVTGAH 1104
            A V  GPG  D       ++ R   L+W+EE QM  D+  YD+H V+  L             +VA + V G +E RPRLAIGD VRLR        A  AA +     G    +G      +         E     E  A+VS+V L  G V +++P        A AA +  GL P +     A+   + +  A     +  G           R TR                 E+AP   WH +F   R GLQF+H AL G +        AA+    RYLFP+  MLP      L      W+   TN+ QR AV DIVT AH
Sbjct:  792 AAVTQGPGSGDQSGVVQRHIDRLRRLLWIEECQMRRDIESYDMHGVRPRLKMH-------GELMVASILVKGAMEHRPRLAIGDEVRLRVSNVGKGPARGAAVEGDFLQGEAVALGCRVVQTNLNMSMLLDGEAVVVGEAVAVVSSVRLKDGLVKMVMPPEST--AVAVAAHAPPGLLPAT-LNARARRNFQRIVAAHLPPAAPRGVPPPPPRKAPQRKTRVAQXXXXXXXXXXXXXXEDAPPR-WHVRFGFSRLGLQFMHAALQGAMR-----SSAAQ----RYLFPDMAMLPPLTGKQLSPPRVAWINARTNELQRKAVVDIVTRAH 1100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1466.3574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FRN2_ECTSI4.390e-20851.71RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5KSW5_9PHAE9.710e-15064.49RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5L991_9PHAE1.470e-2229.01Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A4D9D490_9STRA3.280e-1729.04RNA helicase n=1 Tax=Nannochloropsis salina CCMP17... [more]
W7TFX9_9STRA7.790e-1729.04Rna helicase n=1 Tax=Nannochloropsis gaditana TaxI... [more]
A0A835YTD6_9STRA8.100e-1431.00RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31323:SF1coord: 212..500
NoneNo IPR availablePANTHERPTHR31323FAMILY NOT NAMEDcoord: 212..500

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1466contigH-canaliculatus_F_contig1466:9440..20033 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1466.3574.1mRNA_H-canaliculatus_F_contig1466.3574.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1466 9440..20033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1466.3574.1 ID=prot_H-canaliculatus_F_contig1466.3574.1|Name=mRNA_H-canaliculatus_F_contig1466.3574.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1111bp
QQQQQLQHQHQHHQQQPVFFRQQSAPPSVRVGVGTMPAQTASVMNPSMGG
YPQSLIGAVGHAHPEGVAPLSNKEWPSLQAAVASAVPGVAPTGGVRTLPS
PAPVQGPAAGGTHQQQQQQQQQQQMVTTQMQGQPSAAQQMMQMQPFLQHH
LHQGQQHYQPPHQQQQLQQQQVPQQHQELGHMQTMPTMVSPGPPVFNQFP
GGGDFQQAGLAQGLMHSQHQQQPEQQQQQQQQQQQQQQQQQQQLHPHHGE
KPQQQSFQGQMVGVGQPQGSYMAQLPGPPIAVASLGPMQPEAGGAPFVST
GQTPQQQILAGNPAPGSAPAMVGVSSSSPLSLSAEVGSGEPPGKLDEWAL
ALGGALASDTQLIDAVSKGKHGVVLSLGEDPARVFEPTVVDFGDVATIAS
AGKGGDHRGGADAADGKVTERSSREWGAPAGAGGDVRYSDGGRALSHGGG
GGGGGGGMGMQEEDSYLPQGYNFSSERRAVMHANQPSANWASSSATSTEG
GADGGGGGAGGGGGGGTEEVEDDVGVASISFGNFEGRPANSNTAGGWGAS
HKGESGGSAGGANGDRSLRTTAEDSRRQQQQRQQIDGGGPQGDAGAGEEA
PPLVRTLALSNFGDRPAFLQDLRLMPKDDPGRGLPPFAVRIGDELDSSLL
HTQEKGGGGRRRYSLMPGTHLAVEVEFKRQKEAGFCGKWLTLTLGMVDPP
PPGHPLLNLVDRVERTFVLGTRLLAQAVDGSAAAVLNAEARRFLPLAHRE
WFKHSIKGVVDIPRGKNPFHLPLLKALDILEYEVPEAVRKRFILGAESKV
PWLVRDPREIMDLAGVEVGPGRLDDYVARFTALMWLEESQMSWDVHQYDL
HDVKISLDSSRYREADASTSIVARVEVPGVLESRPRLAIGDVVRLRPPAA
QTPEAFPAASKTRRTTGGGGVVGPDDADGSNRKEENGPDFEVQALVSNVS
LSTGTVTLLLPHPGVLNTFAAAADSKAGLSPGSGPELYAQTIAETVERAR
ADNKSSGGGRNTREEAPLHGWHCKFQLERHGLQFIHHALNGLLTFGDAVE
DAAEPGPLRYLFPEPEMLPKAPVWPLPESSFEWVMPSTNDSQRTAVRDIV
TGAHGQASTQ*
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