prot_H-canaliculatus_F_contig14539.3508.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14539.3508.1
Unique Nameprot_H-canaliculatus_F_contig14539.3508.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length56
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14539.3508.1 vs. uniprot
Match: A0A6H5JKX1_9PHAE (RNB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX1_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 5.890e-28
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:    1 PGTVLLQPGDPVEFWHAQGLVLGNYESPVPGRQSLIVRTESGERLTIDAGQIVGVW 56
            PGTV+LQPGDP+EFWHAQGLVLGNYESPVPGRQSL+VRTE+GE LTIDAGQIVGVW
Sbjct:   20 PGTVILQPGDPIEFWHAQGLVLGNYESPVPGRQSLLVRTEAGEPLTIDAGQIVGVW 75
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14539.3508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JKX1_9PHAE5.890e-2891.07RNB domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14539contigH-canaliculatus_F_contig14539:2124..2291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14539.3508.1mRNA_H-canaliculatus_F_contig14539.3508.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14539 2124..2291 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14539.3508.1 ID=prot_H-canaliculatus_F_contig14539.3508.1|Name=mRNA_H-canaliculatus_F_contig14539.3508.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=56bp
PGTVLLQPGDPVEFWHAQGLVLGNYESPVPGRQSLIVRTESGERLTIDAG
QIVGVW
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