mRNA_H-canaliculatus_F_contig144.3441.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Match: A0A835YZX1_9STRA (Flagellar C1a complex subunit C1a-32-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX1_9STRA) HSP 1 Score: 131 bits (329), Expect = 4.330e-37 Identity = 57/100 (57.00%), Postives = 77/100 (77.00%), Query Frame = 1
Query: 1 VVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDLASSLRASFARFEELILRHAVDRPPWTTGVLNPKDVGAITDYVATSYYRHFTLYKHIF 300
V++DFH YNYAFCKE+RFD + TST++SIM D+L +D+ +D S +ASF RF +LILRH V+RPPW+ G+ +DV IT+YV SYYRH+ +YKH+F
Sbjct: 19 VLVDFHLYNYAFCKEQRFDTQKTSTYMSIMTDVLKQDLSQDDPVSGQQASFDRFRDLILRHCVERPPWSVGIFTLEDVAGITEYVVNSYYRHYRIYKHLF 118
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Match: A0A6V1RZL7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RZL7_HETAK) HSP 1 Score: 112 bits (280), Expect = 3.990e-29 Identity = 46/100 (46.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query: 1 VVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDLASSLRASFARFEELILRHAVDRPPWTTGVLNPKDVGAITDYVATSYYRHFTLYKHIF 300
++LDFH+YNYAFCK+ F STFLSIMKD +D+D +D ++++ASF + ++ +L H ++RPPW+ G+ P+D+ ++D+V YYR F LYK++F
Sbjct: 49 ILLDFHFYNYAFCKKLGFGPTKISTFLSIMKDTIDKDFSQHDAVNTIKASFEQLKKTLLMHCIERPPWSVGIFQPEDLQLLSDFVLNGYYRQFRLYKYLF 148
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Match: T0R735_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R735_SAPDV) HSP 1 Score: 89.7 bits (221), Expect = 3.690e-20 Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 1 VVLDFHYYNYAFCKERRFDARATSTFLSIMKDIL--------DEDMRTNDLASSLRASFARFEELILRHAVDRPPWTTGVLNPKDVGAITDYVATSYYRHFTLYKHIF 300
+V+D + Y YAF K+ F A TST L+I+ ++ ++D+RT +L ASF+RF+ ++LRH+V+RPP +TG+ + DV I DYV +YYRHF LY+ IF
Sbjct: 53 LVVDMYMYLYAFTKQHEFSAERTSTVLAIVHSLVLTDLFLHGEKDLRT---LPTLPASFSRFQAMLLRHSVERPPMSTGIFDAADVSRIVDYVTHTYYRHFHLYQSIF 157
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Match: A0A067CXF4_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CXF4_SAPPC) HSP 1 Score: 85.9 bits (211), Expect = 5.540e-19 Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 1 VVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTN---DLAS--SLRASFARFEELILRHAVDRPPWTTGVLNPKDVGAITDYVATSYYRHFTLYKHIF 300
+V+D + Y YAF K+ F A TST L+I+ ++ D+ + DL + +L SF RF+ ++LRH+V+RPP +TG+ + DV I DYV +YYRHF LY+ IF
Sbjct: 53 LVVDMYMYLYAFTKQHEFSAERTSTVLAIVHSLVLTDLFLHGEKDLRALPTLPGSFGRFQAMLLRHSVERPPMSTGIFDATDVTRIVDYVTHTYYRHFHLYQSIF 157
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Match: A0A7S1Q3Y6_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q3Y6_ALECA) HSP 1 Score: 87.8 bits (216), Expect = 1.050e-18 Identity = 44/104 (42.31%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 1 VVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDLASSLRASFAR----FEELILRHAVDRPPWTTGVLNPKDVGAITDYVATSYYRHFTLYKHIF 300
++ D HY+NY+FC + F A TSTFLSIMK +L+E A S R + A F++ +L+H+V+RPPW+ GV DV A+ DYV +++RH+ LY +++
Sbjct: 99 ILADMHYHNYSFCTAQGFTAMKTSTFLSIMKLVLEE-------AISCRLTAAEACDVFKDWLLKHSVERPPWSVGVFTYDDVKAVMDYVHNTFFRHYRLYMYVY 195
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Match: A0A0G4GFV0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GFV0_VITBC) HSP 1 Score: 83.6 bits (205), Expect = 3.210e-17 Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 1 VVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDLASSLRASFARFEELILRHAVDRPPWTTGVLNPKDVGAITDYVATSYYRHFTLYKHIF 300
++ DFH NY FC E F R S S+M + + +RT + A+F F+ L+LRH+V RPPW+ GV + +DV +T+YV +++RHF LY++++
Sbjct: 59 ILSDFHLNNYLFCLESGFSDRKQSALCSLMAHLFRQTVRTR---LDIHAAFDLFKALLLRHSVQRPPWSVGVFSTQDVKDVTNYVLDTFFRHFKLYQYVY 155
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Match: A0A2G8KUF3_STIJA (Putative coiled-coil domain-containing protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KUF3_STIJA) HSP 1 Score: 79.0 bits (193), Expect = 3.800e-15 Identity = 40/100 (40.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query: 1 VVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDLASSLRASFARFEELILRHAVDRPPWTTGVLNPKDVGAITDYVATSYYRHFTLYKHIF 300
V+LD +Y+ + ++ F+ TSTF SI+K + + T +L F F+EL+L HAV RPPW+ + +P+ VG IT+YV +Y+RH+ LYK+ F
Sbjct: 116 VLLDLYYFTIQYAIDKGFNKEQTSTFFSIVKKTHEVCIETP--FGNLDQCFNYFKELVLCHAVKRPPWSIHLFSPEQVGMITEYVVNTYFRHYKLYKYAF 213
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Match: A0A8B7Y3C2_ACAPL (coiled-coil domain-containing protein 189-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y3C2_ACAPL) HSP 1 Score: 77.0 bits (188), Expect = 9.050e-15 Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 1 VVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDLAS-----SLRASFARFEELILRHAVDRPPWTTGVLNPKDVGAITDYVATSYYRHFTLYKHIF 300
V+LD +YY F + F+ S F SI+K +T+++ S +L ++ F+EL+L HAV RPPW+ + +P V ITDYV +Y+RH+ LYK++F
Sbjct: 68 VLLDLYYYTIQFALDHGFNKEQLSAFFSIVK-------KTHEVCSETPFGNLEQTYNYFKELVLCHAVKRPPWSINLFSPDQVHQITDYVLNTYFRHYKLYKYVF 165
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Match: A0A8C5E236_9TELE (Coiled-coil domain-containing protein 189-like n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5E236_9TELE) HSP 1 Score: 75.1 bits (183), Expect = 1.050e-14 Identity = 36/100 (36.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 1 VVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDLASSLRASFARFEELILRHAVDRPPWTTGVLNPKDVGAITDYVATSYYRHFTLYKHIF 300
V+L+ + + FC+E F TSTFLSI+K I D ++ T ++ + +EL+L H+V RPP++ + P+++ + +Y+ TSY++HF LYK++F
Sbjct: 43 VLLELYVQSVLFCREHNFSREQTSTFLSIIKSIHDLNVETP--FDNIEQCVSYCKELLLCHSVRRPPFSINLFGPEEIKCVFEYIYTSYFKHFKLYKYVF 140
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Match: UPI001425B7CC (coiled-coil domain-containing protein 189-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B7CC) HSP 1 Score: 76.6 bits (187), Expect = 1.230e-14 Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 1 VVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDLASSLRASFARFEELILRHAVDRPPWTTGVLNPKDVGAITDYVATSYYRHFTLYKHIF 300
++LD YY F + +F S F SI+K D+ T +L + F+ELIL HAV RPPW+ + +P+ V +TDYV +Y++H+ LYK++F
Sbjct: 62 ILLDLFYYAIQFALDNQFTKEQISAFFSIVKKT--HDVCTETPFDNLELCYDYFKELILCHAVKRPPWSINIFSPEQVRLVTDYVLGTYFKHYKLYKYVF 159 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig144.3441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig144.3441.1 >prot_H-canaliculatus_F_contig144.3441.1 ID=prot_H-canaliculatus_F_contig144.3441.1|Name=mRNA_H-canaliculatus_F_contig144.3441.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=100bp VVLDFHYYNYAFCKERRFDARATSTFLSIMKDILDEDMRTNDLASSLRASback to top mRNA from alignment at H-canaliculatus_F_contig144:43735..45375+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig144.3441.1 ID=mRNA_H-canaliculatus_F_contig144.3441.1|Name=mRNA_H-canaliculatus_F_contig144.3441.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1641bp|location=Sequence derived from alignment at H-canaliculatus_F_contig144:43735..45375+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig144:43735..45375+ >mRNA_H-canaliculatus_F_contig144.3441.1 ID=mRNA_H-canaliculatus_F_contig144.3441.1|Name=mRNA_H-canaliculatus_F_contig144.3441.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=600bp|location=Sequence derived from alignment at H-canaliculatus_F_contig144:43735..45375+ (Hapterophycus canaliculatus Oshoro5f female)back to top |