mRNA_H-canaliculatus_F_contig14392.3434.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Match: D7FXI7_ECTSI (Aldolase_II domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI7_ECTSI) HSP 1 Score: 351 bits (901), Expect = 1.380e-119 Identity = 162/176 (92.05%), Postives = 168/176 (95.45%), Query Frame = 1
Query: 1 ENGSADVNVQLWKLAQSRLAMHSKSGSDAMDRGAIQIGDLPATAFTHDDMEDQGGEARFDCLEGMYCVWGGEAFVDVRDWADCWVRIRLHPGDVVLIPPNRFHRATPKSPGARLVQVRVKTGDGGVNVEIRDPRTAPPPGSSGTLTGDPRELVASLCRQFYHLGWVTGTGGSISIR 528
ENGS DVN+QLWKLAQ+RLAMHSKSG DA+D+GAIQIGDLPATAFTHDDMEDQGGEARFDCLEGMYCVWGGEAFVDVRDW DCWVR+RL PGDVVLIPPNRFHRATPK+PGARLVQVRVKTGDGGVNVEIRDPRT P PGSSGTL GDPRELVASLCRQFY LGWVTGTGGSISIR
Sbjct: 53 ENGSPDVNIQLWKLAQARLAMHSKSGGDAIDKGAIQIGDLPATAFTHDDMEDQGGEARFDCLEGMYCVWGGEAFVDVRDWVDCWVRVRLQPGDVVLIPPNRFHRATPKTPGARLVQVRVKTGDGGVNVEIRDPRTTPAPGSSGTLAGDPRELVASLCRQFYDLGWVTGTGGSISIR 228
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Match: A0A6H5JCG2_9PHAE (Probable methylthioribulose-1-phosphate dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG2_9PHAE) HSP 1 Score: 349 bits (895), Expect = 4.720e-112 Identity = 161/176 (91.48%), Postives = 168/176 (95.45%), Query Frame = 1
Query: 1 ENGSADVNVQLWKLAQSRLAMHSKSGSDAMDRGAIQIGDLPATAFTHDDMEDQGGEARFDCLEGMYCVWGGEAFVDVRDWADCWVRIRLHPGDVVLIPPNRFHRATPKSPGARLVQVRVKTGDGGVNVEIRDPRTAPPPGSSGTLTGDPRELVASLCRQFYHLGWVTGTGGSISIR 528
ENGS DVN+QLWKLAQ+RLAMHSKSG DAM +GAIQIGDLPATAFTHDDMEDQGGEARFDCLEGMYCVWGGEAFVDVRDWADCWVR+RL PG+VVLIPPNRFHRATPK+PGARL+QVRVKTGDGGVNVEIRDPRT P PGSSGTL GDPRELVASLCRQFY LGWVTGTGGSISIR
Sbjct: 61 ENGSPDVNIQLWKLAQARLAMHSKSGGDAMGKGAIQIGDLPATAFTHDDMEDQGGEARFDCLEGMYCVWGGEAFVDVRDWADCWVRVRLQPGEVVLIPPNRFHRATPKTPGARLMQVRVKTGDGGVNVEIRDPRTTPAPGSSGTLAGDPRELVASLCRQFYDLGWVTGTGGSISIR 236
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Match: A0A7S3XX92_HETAK (Probable methylthioribulose-1-phosphate dehydratase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX92_HETAK) HSP 1 Score: 74.3 bits (181), Expect = 2.190e-12 Identity = 45/115 (39.13%), Postives = 56/115 (48.70%), Query Frame = 1
Query: 193 MYCVWGGEAFVDVRDWADCWVRIRLHPGDVVLIPPNRFHRAT-PKSPGARLVQVRVKTGDGGVNVEIRDPRTAPPPGSSGTLTGDP--RELVASLCRQFYHLGWVTGTGGSISIR 528
+Y V G F+DVRD AD W+RI L +++LIPP + R + L DPR T P R LV LC++FY LGWVTGTGGSIS+R
Sbjct: 96 VYRVVSGSIFIDVRDDADEWIRILLARSELILIPPTVYRREILTEQQYIELESYESPNKGAARTAREEDPRV--------THLSHPYTRHLVVDLCKEFYDLGWVTGTGGSISVR 202
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Match: K3WWJ7_GLOUD (Probable methylthioribulose-1-phosphate dehydratase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWJ7_GLOUD) HSP 1 Score: 73.2 bits (178), Expect = 6.590e-12 Identity = 54/150 (36.00%), Postives = 70/150 (46.67%), Query Frame = 1
Query: 94 RGAIQIGDLPATAFTHDDMEDQGGEARFDCLEGM--YCVWGGEAFVDVRDWADCWVRIRLHPGDVVLIPPNRFHRATPKSPGA--RLVQVRVKTGDGGVNVEIRDPRTAPPPGSSGTLTGDP-RELVASLCRQFYHLGWVTGTGGSISIR 528
R A+Q+ + T D + DQ A G Y + G F+DVRD D W+RI L+ G V + HR P + A V +G + R + P + T+ REL+ LCRQFY GWVTGTGGSISIR
Sbjct: 41 RNALQL-ESNGVETTVDLLTDQELHAEHTNRTGAITYVLKSGRVFLDVRDSGDSWIRILLNAGTPVTLAAGVLHRFVPDATYAPHHAVTATESVAEGDRCLVARFDK---PSDAIQTMQYHKYRELICELCRQFYQAGWVTGTGGSISIR 186
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Match: A0A4D9D244_9STRA (Probable methylthioribulose-1-phosphate dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D244_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 6.710e-12 Identity = 56/184 (30.43%), Postives = 83/184 (45.11%), Query Frame = 1
Query: 58 AMHSKSGSDAMDRGAIQIGDLPATAFTHDDMEDQGGEARFDCLEGM--YCVWGGEAFVDVRDWADCWVRIRLHPGDVVLIPPNRFHRATPKSPGARL-------------VQVRVKTGDG---GVNVEIRDPRTAPPPGSSGTLT---------GDPRELVASLCRQFYHLGWVTGTGGSISIR 528
A + G D + AI +L A AF D +++ G E + + + V G+ ++DVRD AD W+R+ L D + +P + + R P + + V + G G G ++ R A P + G ++L+ LCRQFY LGWVTGTGGSISIR
Sbjct: 28 AFEADKGPDTLFLTAISEKELRA-AFA-DTLKEFGREHCMGAVSEVQDFNVVDGQVYIDVRDSADAWIRVLLFKEDRLTLPSSVWRRLLPTTEDTHVDVAIASRPDPSNGVSKGARNGAGRKEGSAFSVKTYRFASPADERQAMAVWTQRRGQDGGTQQLIVDLCRQFYDLGWVTGTGGSISIR 209
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Match: A0A5D6XXX5_9STRA (Probable methylthioribulose-1-phosphate dehydratase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXX5_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 4.830e-10 Identity = 43/112 (38.39%), Postives = 56/112 (50.00%), Query Frame = 1
Query: 196 YCVWGGEAFVDVRDWADCWVRIRLHPGDVVLIPPNRFHRATPKSPGARLVQVRVKTGDGGVNVEIRDPRTAPPPGSSGTLTGDP-RELVASLCRQFYHLGWVTGTGGSISIR 528
Y V G +DVRD D WVR+ L PG V++ + R + + + V ++G PR A + + REL+ LCRQFY GWVTGTGGSISIR
Sbjct: 77 YTVMRGRVLLDVRDEGDSWVRVLLAPGVRVMLGGHVLRRFIADTTFSGALAV-AESGASASAARALLPRFAKASDAVEVVKYHQYRELICELCRQFYQAGWVTGTGGSISIR 187
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Match: A0A8K1FFG3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFG3_PYTOL) HSP 1 Score: 67.4 bits (163), Expect = 6.540e-10 Identity = 46/113 (40.71%), Postives = 51/113 (45.13%), Query Frame = 1
Query: 196 YCVWGGEAFVDVRDWADCWVRIRLHPGDVVLIPPNRFHRATPKSPGARLVQVRVK--TGDGGVNVEIRDPRTAPPPGSSGTLTGDPRELVASLCRQFYHLGWVTGTGGSISIR 528
Y V G F+DVRD D W+R L PG V + F R VQV V T G + A REL+ LCRQFY GWVTGTGGSISIR
Sbjct: 67 YVVTSGRVFLDVRDAGDAWIRSLLTPGVQVSLVHTTFRRFVLDHTLPADVQVAVLPVTKSGELIPRFNKASDA----LEVVQYHKYRELICELCRQFYEAGWVTGTGGSISIR 175
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Match: M4BJB4_HYAAE (Probable methylthioribulose-1-phosphate dehydratase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJB4_HYAAE) HSP 1 Score: 66.6 bits (161), Expect = 1.210e-9 Identity = 53/180 (29.44%), Postives = 80/180 (44.44%), Query Frame = 1
Query: 1 ENGSADVNVQLWKLAQSRLAMHSKSGSDAMDRGAIQIGDLPATAFTHDDMEDQGGEARFDCLEGMYCVWGGEAFVDVRDWADCWVRIRLHPGDVVLIPPNRFHRATPKSPGARLVQVRVKTGDGGVNVEIRDPRTAPPPGSSGTLT----GDPRELVASLCRQFYHLGWVTGTGGSISIR 528
+ GS+D L L +++ S S GAI + T + ++++ A + +Y V GG ++D RD ADCWVR L G V + + R P + A V+ + V PR + L RELV LCR +Y +GW+TGTGG++S+R
Sbjct: 13 DGGSSD-RATLSLLQSIGVSIAECSSSSRPSEGAIVV-----DVATDETLQNEHSSAS----DLVYKVVGGRVYLDARDSADCWVRCTLIEGMKVTLSLHTLRRFVPITGDA------VQLAESREGVRSLLPRYTRLVDAVNHLVQVDANASRELVCELCRLYYSMGWMTGTGGAMSLR 176
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Match: A0A7M7JM78_VARDE (Probable methylthioribulose-1-phosphate dehydratase n=2 Tax=Varroa destructor TaxID=109461 RepID=A0A7M7JM78_VARDE) HSP 1 Score: 59.7 bits (143), Expect = 1.160e-7 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 1
Query: 442 DPRELVASLCRQFYHLGWVTGTGGSISIR 528
DPREL+ LCRQFYHLGWVTGTGG IS+R
Sbjct: 12 DPRELIPELCRQFYHLGWVTGTGGGISLR 40
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Match: UPI00178542DA (probable methylthioribulose-1-phosphate dehydratase n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI00178542DA) HSP 1 Score: 54.3 bits (129), Expect = 8.000e-7 Identity = 21/28 (75.00%), Postives = 25/28 (89.29%), Query Frame = 1
Query: 445 PRELVASLCRQFYHLGWVTGTGGSISIR 528
PR+L+ LCRQFYHLGWVTGTGG +SI+
Sbjct: 12 PRKLIPELCRQFYHLGWVTGTGGGMSIK 39 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14392.3434.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14392.3434.1 >prot_H-canaliculatus_F_contig14392.3434.1 ID=prot_H-canaliculatus_F_contig14392.3434.1|Name=mRNA_H-canaliculatus_F_contig14392.3434.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=176bp ENGSADVNVQLWKLAQSRLAMHSKSGSDAMDRGAIQIGDLPATAFTHDDMback to top mRNA from alignment at H-canaliculatus_F_contig14392:1212..2583- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14392.3434.1 ID=mRNA_H-canaliculatus_F_contig14392.3434.1|Name=mRNA_H-canaliculatus_F_contig14392.3434.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1372bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14392:1212..2583- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14392:1212..2583- >mRNA_H-canaliculatus_F_contig14392.3434.1 ID=mRNA_H-canaliculatus_F_contig14392.3434.1|Name=mRNA_H-canaliculatus_F_contig14392.3434.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1056bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14392:1212..2583- (Hapterophycus canaliculatus Oshoro5f female)back to top |