prot_H-canaliculatus_F_contig1435.3408.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1435.3408.1
Unique Nameprot_H-canaliculatus_F_contig1435.3408.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length133
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.410e-73
Identity = 124/134 (92.54%), Postives = 126/134 (94.03%), Query Frame = 0 
Query:    2 GKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS---GTNKAKSSASQDY 132
            GKGKGGRG KKS SKSSKAGLQFPVAR+GRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS   G  KA +SASQDY
Sbjct:    3 GKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGGKAKASASASQDY 135
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BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 2.580e-73
Identity = 124/133 (93.23%), Postives = 126/133 (94.74%), Query Frame = 0 
Query:    2 GKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGTNKAKSSAS--QDY 132
            GKGKGGRG KKS SKSSKAGLQFPVAR+GRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS   KAK+SAS  QDY
Sbjct:   54 GKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGKAKASASASQDY 185
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BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Match: A0A7S2CIK1_9STRA (Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIK1_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.120e-66
Identity = 114/134 (85.07%), Postives = 119/134 (88.81%), Query Frame = 0 
Query:    2 GKGKGGRGDK--KSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGTNK-AKSSASQDY 132
            GKGK GRG    K  SKSSKAGLQFPVARVGRYLK+GK+ATRVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI PRHIQLAVRNDEELNKLLG VTI+SGGVLPNIHAVLLPKK+G  K AK SASQDY
Sbjct:    3 GKGKSGRGKTGGKVTSKSSKAGLQFPVARVGRYLKKGKFATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRITPRHIQLAVRNDEELNKLLGNVTISSGGVLPNIHAVLLPKKTGKAKLAKGSASQDY 136
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BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 204 bits (518), Expect = 1.990e-65
Identity = 107/136 (78.68%), Postives = 123/136 (90.44%), Query Frame = 0 
Query:    2 GKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGTNK-----AKSSASQDY 132
            GKGKGGRGDKK+ SKS+KAGLQFPV RVGR+LK+G+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RIIPRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK+ +       + +SASQ+Y
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKSKAAEASTASASQEY 140
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 2.230e-65
Identity = 108/118 (91.53%), Postives = 115/118 (97.46%), Query Frame = 0 
Query:    2 GKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119
            GKGKGGRG KKS ++S+KAGLQFPV RVGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:    3 GKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 6.430e-65
Identity = 109/121 (90.08%), Postives = 116/121 (95.87%), Query Frame = 0 
Query:    2 GKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGTN 122
            GKGKGGRG KKS ++S+KAGLQFPV RVGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+  N
Sbjct:   48 GKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKN 167
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BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Match: B7FWQ2_PHATC (Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FWQ2_PHATC)

HSP 1 Score: 202 bits (513), Expect = 7.270e-65
Identity = 102/122 (83.61%), Postives = 114/122 (93.44%), Query Frame = 0 
Query:    2 GKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGTNK 123
            GKGKGGRGDKKS + S+KAGLQFPV R+GRYL++GKYATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKKSG  K
Sbjct:    5 GKGKGGRGDKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIAAGGVLPNIHAILLPKKSGPTK 126
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BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Match: A0A448ZH28_9STRA (Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 RepID=A0A448ZH28_9STRA)

HSP 1 Score: 200 bits (508), Expect = 3.690e-64
Identity = 101/119 (84.87%), Postives = 113/119 (94.96%), Query Frame = 0 
Query:    2 GKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSG 120
            GKGKGGRG+KKS + S+KAGLQFPV R+GRYL++GKYATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRHI LAV+NDEELNKLLG VTIASGGVLPNIHA+LLPKKSG
Sbjct:    3 GKGKGGRGEKKSTTASAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAILLPKKSG 121
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Match: W7TMB5_9STRA (Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMB5_9STRA)

HSP 1 Score: 199 bits (507), Expect = 8.000e-64
Identity = 105/133 (78.95%), Postives = 114/133 (85.71%), Query Frame = 0 
Query:    2 GKGKGGRGDKKSA--SKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGTNKAKSSASQDY 132
            GKGK GRG  K    S+SSKAGLQFPV R+ R+LK+G+YA RVG+GAPVYLAAVLEYLTAE+LELAGNAARDNKK RIIPRH+QLAVRNDEELNKLLG VTIASGGVLPNIH+VLLPK  G    K SASQDY
Sbjct:    3 GKGKSGRGGGKKGGVSRSSKAGLQFPVGRISRFLKKGRYAARVGSGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHVQLAVRNDEELNKLLGGVTIASGGVLPNIHSVLLPKSKGKKSGKGSASQDY 135
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BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Match: K0S6I8_THAOC (Uncharacterized protein n=3 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6I8_THAOC)

HSP 1 Score: 205 bits (521), Expect = 2.120e-63
Identity = 106/126 (84.13%), Postives = 117/126 (92.86%), Query Frame = 0 
Query:    2 GKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSGTNKAKSS 127
            GKGKGGRG+KKS + S+KAGLQFPV R+GRYL++GKYATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKKARIIPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKKSG  +A+ S
Sbjct:    3 GKGKGGRGEKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKARIIPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSGKARAQRS 128
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1435.3408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KG79_9PHAE1.410e-7392.54Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI2.580e-7393.23Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A7S2CIK1_9STRA2.120e-6685.07Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687... [more]
A0A835ZLE9_9STRA1.990e-6578.68Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
D7FWI9_ECTSI2.230e-6591.53Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI6.430e-6590.08Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
B7FWQ2_PHATC7.270e-6583.61Histone H2A n=9 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A448ZH28_9STRA3.690e-6484.87Histone H2A n=12 Tax=Bacillariophyta TaxID=2836 Re... [more]
W7TMB5_9STRA8.000e-6478.95Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 R... [more]
K0S6I8_THAOC2.120e-6384.13Uncharacterized protein n=3 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 56..69
score: 90.54
coord: 70..84
score: 77.52
coord: 12..34
score: 62.9
coord: 41..56
score: 90.36
coord: 98..116
score: 76.04
IPR002119Histone H2ASMARTSM00414h2a4coord: 2..121
e-value: 4.4E-77
score: 272.1
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 7..87
e-value: 5.5E-16
score: 59.1
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 90..123
e-value: 1.7E-19
score: 69.2
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..127
e-value: 5.4E-62
score: 209.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..121
NoneNo IPR availablePANTHERPTHR23430:SF238coord: 3..130
NoneNo IPR availablePANTHERPTHR23430HISTONE H2Acoord: 3..130
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 20..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1435contigH-canaliculatus_F_contig1435:24235..24992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1435.3408.1mRNA_H-canaliculatus_F_contig1435.3408.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1435 24235..24992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1435.3408.1 ID=prot_H-canaliculatus_F_contig1435.3408.1|Name=mRNA_H-canaliculatus_F_contig1435.3408.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=133bp
MGKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYL
AAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVT
IASGGVLPNIHAVLLPKKSGTNKAKSSASQDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032458Histone_H2A_CS
IPR009072Histone-fold
IPR032454Histone_H2A_C
IPR007125Histone_H2A/H2B/H3
IPR002119Histone_H2A