mRNA_H-canaliculatus_F_contig1430.3373.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Match: A0A6H5JXI4_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXI4_9PHAE) HSP 1 Score: 348 bits (893), Expect = 6.420e-112 Identity = 161/183 (87.98%), Postives = 177/183 (96.72%), Query Frame = 1
Query: 1 VLFWSRKEQVQCAVSSASVMAFVYLLVAVCFDFDWTAIVVRHAVPVIIMNYWLVMVTYLQHHESDTETFDDADFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYRYRNNPNFLWVFVRDNYKLGFHTHSKAHDHRAKMHYLDASRTPAFSNK 549
VLFWSRKEQVQCAVS+ASV+ F+YLLV+V FDFDW+AIVVRH VPV+IMNYWLVMVTYLQHHE DT+TFD++DFHFATAAMETVDRK+GWGIDDAHHNITDGHVAHHLFFTKIPHYNL+KATAAIRP+LEKLG+YRYRNNPNFLWVF R+NYKLGF+THSKAHDHRAKMHYLDASRTPAF +K
Sbjct: 199 VLFWSRKEQVQCAVSTASVLTFIYLLVSVLFDFDWSAIVVRHLVPVMIMNYWLVMVTYLQHHEEDTKTFDNSDFHFATAAMETVDRKFGWGIDDAHHNITDGHVAHHLFFTKIPHYNLQKATAAIRPSLEKLGLYRYRNNPNFLWVFARENYKLGFYTHSKAHDHRAKMHYLDASRTPAFKSK 381
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Match: A0A835YPJ0_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ0_9STRA) HSP 1 Score: 224 bits (572), Expect = 2.220e-64 Identity = 107/161 (66.46%), Postives = 125/161 (77.64%), Query Frame = 1
Query: 4 LFWSRKEQVQCAVSSASVMAFVYLLVAVCFDFDWTAIVVRHAVPVIIMNYWLVMVTYLQHHESDTETFDDADFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYRYRNNPNFLWVFVRDNYKLGFHTHSKA 486
LF +R ++VQCAVSS +V F+ L + ++ W+A V++A P I NYWLVMVTYLQHHE D+ T+DDAD+ FA AAMETVDRKY WG+DD HHNITDGHV HHLFFTKIPHYNL KAT A+RP LE LGVYRY+ NP FLW FV+ NYK G THSKA
Sbjct: 201 LFKNRTQRVQCAVSSLAVALFLGLFLHYVIEYSWSAFAVKYAAPWCIYNYWLVMVTYLQHHEPDSITYDDADYSFAVAAMETVDRKYCWGVDDLHHNITDGHVVHHLFFTKIPHYNLMKATDALRPYLEGLGVYRYQRNPLFLWTFVQYNYKYGLFTHSKA 361
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Match: A0A7S4PZI0_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4PZI0_9DINO) HSP 1 Score: 150 bits (379), Expect = 1.280e-36 Identity = 76/152 (50.00%), Postives = 109/152 (71.71%), Query Frame = 1
Query: 4 LFWSRKEQVQCAVSSASVMAFVYLLVAVCFDFD-WTAIVVRHAVPVIIMNYWLVMVTYLQHHESDTETFDDADFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLG--VYRYRNNPNFLWVFVRD 450
LF + +++VQCAVSS SV+AF V + F FD W + P+ N WLV+VTYLQHH+ +T +D+ ++++ A ETVDR YG+GIDD HHNITDGHV HH+FFT+IPHY+LK+ATAAI P ++K G +Y+++ + +FL+ + R+
Sbjct: 216 LFETTQQRVQCAVSSLSVVAF---SVGMYFYFDSWGQWFSMYFGPLCFFNMWLVLVTYLQHHDDETLAYDEGEWNYLRGAFETVDRTYGFGIDDIHHNITDGHVLHHIFFTQIPHYHLKEATAAIVPVIQKYGKGLYKHQESRDFLYKYSRN 364
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Match: A0A1S7C7R3_9STRA (Om n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7R3_9STRA) HSP 1 Score: 149 bits (376), Expect = 5.370e-36 Identity = 75/158 (47.47%), Postives = 106/158 (67.09%), Query Frame = 1
Query: 4 LFWSRKEQVQCAVSSASVM---AFVYLLVAVCFDFDWTAIVVRHAVPVIIMNYWLVMVTYLQHHESDTETFDDADFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYRYRNNPNFLWVFVRDNYKLGF 468
LF KE+VQCAVS+ ++ A VY+ + + I + VP+++ N W+ MVTYLQHH+ DT+ + + ++++ A+ET+DR+YG GIDD HNITDGHVAHHLFFT+IPHY+L ATAA+R L+ G Y+ R + NFL F NY+L +
Sbjct: 179 LFTDTKERVQCAVSTLGMVVAGALVYIGLEGGKEGGMARIGSIYVVPLLVFNAWITMVTYLQHHDEDTKVYAEGEWNYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLTAATAAVRQCLQPTGTYKKRRSWNFLARFTELNYRLKY 336
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Match: A0A4D9DBT0_9STRA (FA_desaturase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBT0_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.070e-35 Identity = 72/158 (45.57%), Postives = 104/158 (65.82%), Query Frame = 1
Query: 4 LFWSRKEQVQCAVSSASVMA---FVYLLVAVCFDFDWTAIVVRHAVPVIIMNYWLVMVTYLQHHESDTETFDDADFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYRYRNNPNFLWVFVRDNYKLGF 468
LF KE++QCAVS+ ++ +Y+ + + I + +P+++ N W+ MVTYLQHH+ DT+ + + ++ + A+ET+DR+YG GIDD HNITDGHVAHHLFFT+IPHY+LK ATAA+R L G Y+ + + NFL F NYKL +
Sbjct: 152 LFSGTKERIQCAVSTLCMLVAGVLIYVGLEGGAEGGLARIGSMYLIPLLVFNAWITMVTYLQHHDEDTKVYAEGEWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYKKKQSWNFLGKFTELNYKLKY 309
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Match: A0A4U8UWN0_STECR (FA_desaturase domain-containing protein n=2 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U8UWN0_STECR) HSP 1 Score: 147 bits (371), Expect = 3.790e-35 Identity = 74/155 (47.74%), Postives = 96/155 (61.94%), Query Frame = 1
Query: 4 LFWSRKEQVQCAVSSASVMAFVYLLVAVCFDFDWTAIVVRHAVPVIIMNYWLVMVTYLQHHESDTETFDDADFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYRYRNNPNFLWVFVRDNYKLGF 468
LF S E++QC +S + Y+ A C +DW + VPV+ +WL MVTYLQH D ++D + + M+T+DR YG+GID H+ITDGHVAHHLFFTKIPHYNL KAT A+R LE GVYR R + +FL F R N +L +
Sbjct: 258 LFNSTTERIQCFISGLACALCAYVAFAFC-SYDWLTYGKFYIVPVLCQGFWLTMVTYLQHQSDDINVYEDGTWGYVRGQMQTIDRPYGFGIDQLMHHITDGHVAHHLFFTKIPHYNLMKATKALRDKLEPFGVYRRRVSYDFLLEFCRLNMRLEY 411
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Match: I2CR09_NANGC (Glycerolipid omega-3 fatty acid desaturase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR09_NANGC) HSP 1 Score: 147 bits (371), Expect = 6.010e-35 Identity = 72/158 (45.57%), Postives = 104/158 (65.82%), Query Frame = 1
Query: 4 LFWSRKEQVQCAVSSASVMA---FVYLLVAVCFDFDWTAIVVRHAVPVIIMNYWLVMVTYLQHHESDTETFDDADFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYRYRNNPNFLWVFVRDNYKLGF 468
LF KE++QCAVS+ ++ +Y+ + + I + +P+++ N W+ MVTYLQHH+ DT+ + + ++ + A+ET+DR+YG GIDD HNITDGHVAHHLFFT+IPHY+LK ATAA+R L G Y+ + + NFL F NYKL +
Sbjct: 229 LFSDTKERIQCAVSTLCMLVAGVLIYVGLEGGAEGGLARIGSMYLIPLLVFNAWITMVTYLQHHDEDTKVYAEGEWSYIKGALETIDREYGMGIDDLSHNITDGHVAHHLFFTQIPHYHLKDATAAVRQLLTPTGTYKKKQSWNFLGKFTELNYKLKY 386
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Match: A0A0N5D9B4_THECL (FA_desaturase domain-containing protein n=1 Tax=Thelazia callipaeda TaxID=103827 RepID=A0A0N5D9B4_THECL) HSP 1 Score: 143 bits (361), Expect = 2.750e-34 Identity = 67/155 (43.23%), Postives = 101/155 (65.16%), Query Frame = 1
Query: 4 LFWSRKEQVQCAVSSASVMAFVYLLVAVCFDFDWTAIVVRHAVPVIIMNYWLVMVTYLQHHESDTETFDDADFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYRYRNNPNFLWVFVRDNYKLGF 468
LF + +E+VQC +S S + +C D+ W + + + ++ YWLV++TYLQH++ E +++ + + ++T+DR YG+GID A H+ITDGHVAHH FFTKIPHY+L KATAAI+ LE G YR ++N +FLW ++ N KL +
Sbjct: 197 LFNNNRERVQCLISGLSCLLCAVGAFVIC-DYSWFLFIKYYYISLLFQGYWLVIITYLQHNDYSIEVYEEGYWSYVMGQVQTIDRVYGFGIDVAMHHITDGHVAHHFFFTKIPHYHLMKATAAIKKVLEPYGAYRCKSNYDFLWEYLLLNVKLEY 350
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Match: A0A4Y5R1F4_9BILA (Fatty acid desaturase n=1 Tax=Mesorhabditis longespiculosa TaxID=473162 RepID=A0A4Y5R1F4_9BILA) HSP 1 Score: 139 bits (351), Expect = 1.900e-32 Identity = 75/161 (46.58%), Postives = 102/161 (63.35%), Query Frame = 1
Query: 4 LFWSRKEQVQCAVSSASVMA-----FVYLLVAVCFDFD---WTAIVVRHAVPVIIMNYWLVMVTYLQHHESDTETFDDADFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTLEKLGVYRYRNNPNFLWVFVRDNYKL 462
+F + E++QCAVS +A F YL D+D WT + +PVI +WL MVTYLQH D + F+D + + ++T+DR YG+GID H+ITDGHVAHHLFFT+IPHYNL KAT A++ LE LGVYR++ + +FL+ F + N KL
Sbjct: 253 MFDNTTERIQCAVSGLCCLAWASAAFWYL------DYDVYSWTKF---YLLPVISQGFWLTMVTYLQHQTEDIKVFEDGTWGYVKGQLQTIDRPYGFGIDQLMHHITDGHVAHHLFFTQIPHYNLMKATKALQEKLEPLGVYRHQKSHDFLYQFYQLNRKL 404
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Match: A0A6V7U4C9_9BILA (Hypothetical protein n=3 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7U4C9_9BILA) HSP 1 Score: 136 bits (342), Expect = 1.080e-31 Identity = 72/159 (45.28%), Postives = 106/159 (66.67%), Query Frame = 1
Query: 4 LFWSRKEQVQCAVSSASVMAFVYLLVAVCFDFDWTAIVVRHAVPVI--IMNYWLVMVTYLQHHESDTETFDDADFHFATAAMETVDRKYGWGIDDAHHNITDGHVAHHLFFTKIPHYNLKKATAAIRPTL-EKL-GVYRYRNNPNFLWVFVRDNYKLGF 468
LF + ++++CAVS A+ Y+ + C +++ + VPV+ ++ +WLVM+TYLQHH+ TE ++D + F ++TVDR +G+GID A HNITDGHVAHHLFFT+IPHYNL KAT A++ L EK G Y+Y+ + +FL F+ N KL +
Sbjct: 181 LFENNTDRIKCAVSVAACFLCAYIALY-CSNYNLWIFFKYYYVPVMFQVLCFWLVMITYLQHHDEQTEVYEDGTWGFVKGQLQTVDRSFGFGIDKAMHNITDGHVAHHLFFTRIPHYNLPKATEAVKRILMEKYPGTYKYKKSYDFLIEFLWLNIKLDY 338 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1430.3373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1430.3373.1 >prot_H-canaliculatus_F_contig1430.3373.1 ID=prot_H-canaliculatus_F_contig1430.3373.1|Name=mRNA_H-canaliculatus_F_contig1430.3373.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=168bp MAFVYLLVAVCFDFDWTAIVVRHAVPVIIMNYWLVMVTYLQHHESDTETFback to top mRNA from alignment at H-canaliculatus_F_contig1430:24395..26791- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1430.3373.1 ID=mRNA_H-canaliculatus_F_contig1430.3373.1|Name=mRNA_H-canaliculatus_F_contig1430.3373.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2397bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1430:24395..26791- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1430:24395..26791- >mRNA_H-canaliculatus_F_contig1430.3373.1 ID=mRNA_H-canaliculatus_F_contig1430.3373.1|Name=mRNA_H-canaliculatus_F_contig1430.3373.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1008bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1430:24395..26791- (Hapterophycus canaliculatus Oshoro5f female)back to top |