prot_H-canaliculatus_F_contig1427.3354.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1427.3354.1
Unique Nameprot_H-canaliculatus_F_contig1427.3354.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length626
Homology
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: D8LRU5_ECTSI (Novel Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU5_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 2.420e-89
Identity = 180/229 (78.60%), Postives = 188/229 (82.10%), Query Frame = 0
Query:  289 AAAVPSSPHVAQAAGQAAQQNQRKTPAAQRQSPRSHQHQHPSQPTGAPRGRRNAQPRSRQPYNGG-AGRGGAANTSG--ATARAPGPMVGTGEALLSIRAKGGPPAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGA--DAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGQNRNRPG 512
            AA   SSP VAQAAGQAAQQNQR+ P  QR  PRS QHQHPSQPTGAPRGRRN  PRSRQ  NGG AGRG A  TS   A AR PG MVGTGEALL+IRA+GGP    DGKGAASV TAQEFDFQ ELQKFDKEKELAKEM GL++ A  S STA +GG G   D+VKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRG NRN+PG
Sbjct:  185 AAPASSSPRVAQAAGQAAQQNQRRAPTGQRPPPRSQQHQHPSQPTGAPRGRRNGTPRSRQLINGGGAGRGAAGGTSATSAPARTPGAMVGTGEALLNIRARGGP--ATDGKGAASVPTAQEFDFQSELQKFDKEKELAKEMGGLSVEA--SNSTASSGGAGGATDSVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGHNRNKPG 409          
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A7S2DIJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIJ2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.100e-12
Identity = 63/148 (42.57%), Postives = 78/148 (52.70%), Query Frame = 0
Query:  364 GATARAPGPMVGTGEALLSIRAKGGPPAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKS-SFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR-RGGRGQNRN 509
            GA+    G M GTG +LL+ + KG      + + A S   +++FDF    + FDK+KE  K      L A+ S  TA       D+ KKYN S SFFDE+SCD LDR   R    TR  E   N +TFG  GLQ  RR RG RGQ  N
Sbjct:  246 GASGSRSGAMPGTGASLLTRKPKG---LDKEHRNALSAEMSEDFDFSSAAEDFDKKKEAEK------LAARGSSITAEG-----DSSKKYNPSASFFDELSCDALDRGGKRFDSQTRLDEQKKNSETFGAVGLQDNRRSRGARGQRNN 379          
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A3F2RWG2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWG2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.920e-9
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 0
Query:  390 PAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR-RGGRGQNRNRPGG 513
            P+  +G G      + EF+F   L  FDK++E +K                +   T  ++   Y KSSFFD ISCD LDR  G++ R++ A E  +N +TFG  GL + R  RGGRG+   R GG
Sbjct:  165 PSGAEGAGVGPDDASGEFNFAEGLNDFDKQQEFSK----------------LEENTKTESKGSYQKSSFFDTISCDALDRLEGQRARMSGAEERKLNTETFGAVGLNNRRNFRGGRGRGGRRNGG 273          
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A3R7GHF0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GHF0_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 4.360e-9
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 0
Query:  390 PAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR-RGGRGQNRNRPGG 513
            P+  +G G      + EF+F   L  FDK++E +K                +   T  ++   Y KSSFFD ISCD LDR  G++ R++ A E  +N +TFG  GL + R  RGGRG+   R GG
Sbjct:  213 PSGAEGAGVGPDDASGEFNFAEGLNDFDKQQEFSK----------------LEENTKTESKGSYQKSSFFDTISCDALDRLEGQRARMSGAEERKLNTETFGAVGLNNRRNFRGGRGRGGRRNGG 321          
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: M4BC25_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BC25_HYAAE)

HSP 1 Score: 69.7 bits (169), Expect = 4.510e-9
Identity = 47/133 (35.34%), Postives = 69/133 (51.88%), Query Frame = 0
Query:  375 GTGEALLSIRAKGGPPA-QVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGQ 506
            G G  LL+ + + GP     +G G    + + EF+F+ +L  FDK++E +K                +   T  ++   Y KSSFFD ISCD LDR  G++ R+T A E  +N +TFG  GL + R   GRG+
Sbjct:  209 GMGGHLLNRKERRGPGGVDENGAGGRPETASCEFNFEAKLSDFDKQQEFSK----------------LEEDTKKESTGSYQKSSFFDTISCDALDRLEGQRARMTGAQERTLNTETFGAVGLNNRRNFRGRGR 325          
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A836C876_9STRA (Scd6-like Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C876_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 4.580e-9
Identity = 57/141 (40.43%), Postives = 73/141 (51.77%), Query Frame = 0
Query:  370 PGPMVGTGEALLSIRAKGGPPAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAV----------KKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR 500
            PG  VGTG+ L++   +GG        G  +V + +EFDFQ  L +FDK+ E   E+ G+   A      A  G  G +A+          KKYNKSSFFDEISCD LD   GR  RV    E  +N +TFG TG+    R
Sbjct:  160 PGKTVGTGDHLMARPNRGG--------GGIAVES-EEFDFQAALSQFDKDAERT-EIYGVGTAAD-----AAGGLDGGEALALXXXXXXXPKKYNKSSFFDEISCDALD---GRH-RVPGFTERKLNTETFGATGVNTGNR 281          
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A8K1CKG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKG8_PYTOL)

HSP 1 Score: 68.9 bits (167), Expect = 8.790e-9
Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = 0
Query:  375 GTGEALLSIRAKGGPPAQVDGKG-AASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR-RGGRG 505
            G G+ LL  R +     +V G G   SV++  +F+F+  L  FDKE+E  K    L+L    ++ +             Y KSSFFD ISCD LDR  G+Q R+T + E  +N +TFG  GL + R  RGGRG
Sbjct:  227 GMGDHLLKRRER-----RVPGGGDPTSVTSGNDFNFENGLNDFDKEEEFNK----LSLDDNKAKGS-------------YQKSSFFDTISCDALDRLEGKQGRITASEERKLNTETFGAVGLNNRRSFRGGRG 337          
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A485L4C0_9STRA (Aste57867_15718 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4C0_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.000e-8
Identity = 47/104 (45.19%), Postives = 55/104 (52.88%), Query Frame = 0
Query:  406 EFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGQNRN 509
            EFDF G L  FDKEKE +K    LT+   +SR    +          Y KSSFFD ISCD LDR  G   R+    E  +N +TFG  GL +  RR  RG NRN
Sbjct:  264 EFDFAGGLGDFDKEKEFSK----LTVEESSSRPVVKSA---------YQKSSFFDTISCDALDRLEGNSGRMKAHEERKLNTETFGAVGLNN--RRNYRGGNRN 352          
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A484E5S7_BRELC (TFG domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5S7_BRELC)

HSP 1 Score: 65.9 bits (159), Expect = 5.720e-8
Identity = 41/119 (34.45%), Postives = 58/119 (48.74%), Query Frame = 0
Query:  390 PAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAVKKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGQNR 508
            P   +G      + + EF+F+  L  FDK++E  K                +   T  D+   Y KS FFD ISCD LDR  G++ R++ A E  +N +TFG  GL + R   GRG+ R
Sbjct:  179 PGGTEGTKVVPEAASGEFNFEERLHDFDKQQEFVK----------------LEESTKKDSKGSYQKSMFFDTISCDALDRLEGQRSRMSGAEERKLNTETFGAVGLNNRRNLRGRGRGR 281          
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Match: A0A7S3PJE4_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJE4_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 9.750e-8
Identity = 58/144 (40.28%), Postives = 75/144 (52.08%), Query Frame = 0
Query:  371 GPMVGTGEALLSIRAKGGPPAQVDGKGAASVSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGAD---AVKKYNKSS-FFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARRRGGRGQNRNR 510
            G + G G+ L  +R +GG      G   + ++T  EFDF    +KFDKE ELAK    L+L   T   +        D   A   Y+KSS FFD ISCD+ DRAAG++  +  A E  +N +TFG  GLQH      RGQ R R
Sbjct:  183 GAIPGMGKHLEKVRMRGG-----GGNIESDLNT--EFDFASMNEKFDKEAELAK----LSLNENTISGSDEEDENAEDDETATAGYDKSSSFFDTISCDMNDRAAGKR-NLGGAEERQLNSETFGAVGLQH------RGQGRGR 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1427.3354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRU5_ECTSI2.420e-8978.60Novel Sm-like protein with long N-and C-terminal d... [more]
A0A7S2DIJ2_9STRA3.100e-1242.57Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A3F2RWG2_9STRA2.920e-936.80Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A3R7GHF0_9STRA4.360e-936.80Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
M4BC25_HYAAE4.510e-935.34Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A836C876_9STRA4.580e-940.43Scd6-like Sm domain-containing protein n=1 Tax=Tri... [more]
A0A8K1CKG8_PYTOL8.790e-939.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485L4C0_9STRA2.000e-845.19Aste57867_15718 protein n=1 Tax=Aphanomyces stella... [more]
A0A484E5S7_BRELC5.720e-834.45TFG domain-containing protein n=1 Tax=Bremia lactu... [more]
A0A7S3PJE4_9STRA9.750e-840.28Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019050FDF domainSMARTSM01199FDF_2coord: 401..494
e-value: 1.0E-15
score: 68.2
IPR019050FDF domainPFAMPF09532FDFcoord: 404..492
e-value: 2.4E-6
score: 28.4
NoneNo IPR availablePANTHERPTHR13586SCD6 PROTEIN-RELATEDcoord: 239..532
IPR025761FFD boxPROSITEPS51513FFDcoord: 451..466
score: 12.169
IPR025768TFG boxPROSITEPS51536TFGcoord: 474..494
score: 12.041

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1427contigH-canaliculatus_F_contig1427:175..5769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1427.3354.1mRNA_H-canaliculatus_F_contig1427.3354.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1427 2..7162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1427.3354.1 ID=prot_H-canaliculatus_F_contig1427.3354.1|Name=mRNA_H-canaliculatus_F_contig1427.3354.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=626bp
MNSPSQVGSALLNHIAAGWSRHLKATRSLSHTSPKIPARLPCSFTKQASQ
PPPPPPPPPPAAPIQFTQPPPPTAPPPPAGPPPLLSPAFVAGAAVMHPQP
QQQLQQTPPSQQQYQRQQPPPPPQQPPPPQQPPPPQQPPPPQQPPPPQQP
LPPQQPPPQQQPPPQQQQPPQQQPPPQQQPPPQQPPPQQRQPPQQHRQQH
QPPPAPRQQTRALQGSNLHQQRQQQQHHQPQQRDHQPPPPSITSGAQRSA
KVTPNRQQQQQQQPTQSSQRPPAPSTRNAPPAQGHRTGAAAVPSSPHVAQ
AAGQAAQQNQRKTPAAQRQSPRSHQHQHPSQPTGAPRGRRNAQPRSRQPY
NGGAGRGGAANTSGATARAPGPMVGTGEALLSIRAKGGPPAQVDGKGAAS
VSTAQEFDFQGELQKFDKEKELAKEMDGLTLVAQTSRSTAVAGGTGADAV
KKYNKSSFFDEISCDVLDRAAGRQPRVTRAAEMDMNMDTFGTTGLQHARR
RGGRGQNRNRPGGGGATSAGGRGVRGGVGVGNSATGVGGATAGGGRGGGG
GGRAGAGRGPGGGGRAAGRGGYTGGSKSGTNVGQDRRGGAGQARPRPRGG
RGRGSQVGQGQKSQAPAAASQSQAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025768TFG_box
IPR025761FFD_box
IPR019050FDF_dom