mRNA_H-canaliculatus_F_contig14268.3352.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Match: A0A6H5JGT6_9PHAE (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGT6_9PHAE) HSP 1 Score: 298 bits (763), Expect = 8.530e-98 Identity = 144/158 (91.14%), Postives = 154/158 (97.47%), Query Frame = 1
Query: 1 AGRGTFSQGASGWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNSAGAYIRPLAGICLEVTEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFSPPPPQAKPKADPMARGKGADVLSLDELIGEGKEGALVDVVLEPGQ 474
AGRGTFSQG++GWRMAPVSTPRGKSFEDAKLRF+DV+ AL++KSGTVVVNSAGAYIRPLAGICL+V EALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVF PPPPQAKPKADPMARGKGADVLSLDE+IG+GK GALVD+VLEPGQ
Sbjct: 46 AGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKNALKEKSGTVVVNSAGAYIRPLAGICLDVMEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFPPPPPQAKPKADPMARGKGADVLSLDEMIGDGKPGALVDIVLEPGQ 203
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Match: A0A0M0K7A9_9EUKA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K7A9_9EUKA) HSP 1 Score: 187 bits (475), Expect = 8.850e-55 Identity = 97/160 (60.62%), Postives = 113/160 (70.62%), Query Frame = 1
Query: 1 AGRGTFSQ-GASGWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNSAGAYIRPLAGICLEVTEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFSPPPPQAKPKADPMARGKGADVLSLDELIGEGKEGALVDVVLEPGQV 477
AGRG G GW+MA VS PRG SFEDAK+R+ DVQ A+E GTVV NSAGA+I L +CL +A +P CLNLY+TA G TSAPPHTDKQDVFV+Q+ G KRWRV++PPPP AKP ADP+ARGK D L LDEL L+DVVL PG +
Sbjct: 75 AGRGIAEDLGDGGWKMAAVSQPRGSSFEDAKMRYVDVQKAMED--GTVVFNSAGAHISRLGSMCLAALDAFGLPNCLNLYVTAKGCATSAPPHTDKQDVFVLQSGGAKRWRVYTPPPPDAKPHADPLARGKAHDALRLDELAAP-----LLDVVLRPGDM 227
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Match: A0A7S2G032_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G032_9STRA) HSP 1 Score: 174 bits (441), Expect = 4.150e-53 Identity = 86/140 (61.43%), Postives = 102/140 (72.86%), Query Frame = 1
Query: 1 AGRGTFSQGASGWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNSAGAYIRPLAGICLEVTEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFSPPPPQAKPKADPMARGKGADVLSLDEL 420
AGRG S G GW+M VS PRG SFEDAK+R+ DV+A+L + GTVV NSAG+ L+ ICL + D+P CLNLY+T G TSAPPHTDKQDV V+QT+GRK WRVFSPPP A P ADP+ARGK AD L +D+L
Sbjct: 7 AGRG-ISDGIGGWKMGAVSVPRGNSFEDAKMRYVDVEASLSK--GTVVFNSAGSNFDKLSAICLAALDVFDLPNCLNLYLTGVGTATSAPPHTDKQDVMVIQTRGRKHWRVFSPPPVAASPFADPLARGKAADRLEVDDL 143
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Match: A0A7S2XYX3_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYX3_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.000e-52 Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 1
Query: 1 AGRGTFSQ-GASGWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNSAGAYIRPLAGICLEVTEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFSPPPPQAKPKADPMARGKGADVLSLDELIGEGKEGALVDVVLEPGQV 477
AGRG + G +GW+MA V +GK+ K++ EDV+ AL Q+SGTVV NSAGA + L+G+CL+V L +P LNLY+TAAGQ TSAPPHTDKQDVFV+QTQG+K WRVF+PP P+ +P ADP RGKG DVLSL+EL GE L+D VL PGQV
Sbjct: 142 AGRGLVDEDGRAGWQMARVG--KGKASSPKKMKVEDVRKALSQRSGTVVFNSAGANVPALSGVCLDVASVLQLPTNLNLYLTAAGQTTSAPPHTDKQDVFVVQTQGQKHWRVFAPPEPKLRPAADPFVRGKGRDVLSLEEL-GE----PLIDTVLSPGQV 294
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Match: A0A7S3TKE7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TKE7_9SPIT) HSP 1 Score: 172 bits (437), Expect = 1.350e-52 Identity = 83/131 (63.36%), Postives = 98/131 (74.81%), Query Frame = 1
Query: 16 FSQGASGWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNSAGAYIRPLAGICLEVTEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFSPPPPQAKPKADPMARGKGADVLS 408
S SGW+MA VS PRG S+EDAKLR+ DV +++ GTVV NSAGA+I LA +CL EA +P CLNLY++ G KTSAPPHTDKQDVFV+QT G K WRVF+PP P +PKADP+ARGKG DVLS
Sbjct: 14 ISDAGSGWKMAAVSEPRGTSYEDAKLRYIDVADGMQR--GTVVFNSAGAHIPKLAAVCLAALEAFGLPNCLNLYLSGRGLKTSAPPHTDKQDVFVLQTAGSKHWRVFAPPDPSLRPKADPLARGKGNDVLS 142
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Match: A0A7S2CTT2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CTT2_9EUKA) HSP 1 Score: 165 bits (417), Expect = 8.110e-49 Identity = 81/128 (63.28%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 1 AGRGTFSQGASGWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNSAGAYIRPLAGICLEVTEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFSPPPPQAKPKADPMAR 384
AGRG G GW+MAPVS PRG SFEDAK+R+ DV A+ K GTVV NSAGA++ L CL +A ++P CLNLY+TA G +TSAPPHTDKQDVFV+Q++G KRWRVF PP P AKP ADP+AR
Sbjct: 74 AGRGIPDNG--GWKMAPVSKPRGSSFEDAKMRYVDVVEAM--KLGTVVFNSAGAHVPRLGSACLAAMDAFELPNCLNLYVTAKGTETSAPPHTDKQDVFVLQSRGAKRWRVFEPPAPAAKPSADPLAR 197
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Match: A0A7S1UD86_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=5 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UD86_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.640e-47 Identity = 92/159 (57.86%), Postives = 113/159 (71.07%), Query Frame = 1
Query: 1 AGRGTFSQGASGWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNSAGAYIRPLAGICLEVTEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFSPPPPQAKPKADPMARGKGADVLSLDELIGEGKEGALVDVVLEPGQV 477
AGRGT +Q SGW+MAPV RG SF DAK+ ++DV A+E +GTVV NSAGA+I L+ + L +A P CLNLY+TA G+KTSAPPHTDKQDVFV+QTQG K WRV+ P P +P +DP+ARGK DV LD L GE L+DV+L+PG V
Sbjct: 109 AGRGT-TQMRSGWKMAPVGQVRGSSFLDAKMNYDDVVTAME--AGTVVFNSAGAHIPKLSAVSLAALDAFGYPTCLNLYLTAKGKKTSAPPHTDKQDVFVIQTQGFKHWRVYPMPNPAREPLSDPLARGKNNDVCDLDTL-GE----PLLDVILKPGDV 259
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Match: A0A7S3VEB8_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VEB8_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.480e-45 Identity = 86/152 (56.58%), Postives = 112/152 (73.68%), Query Frame = 1
Query: 34 GWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNSAGAYIRPLAGICLEVTEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFSPPPPQAKPKADPMARGKGADVLSLDELIGEGKEGA--LVDVVLEPGQVGF 483
GW++A VSTPRG SFEDA++ ++VQAAL + GTV+ N+AG++I LAG L T+A +P LN+Y+TAAG++TSAPPHTD+QDV V+QTQG+K W+V+SPP P KP+AD ARGKG D L + L EG+ G L+DV LE G V F
Sbjct: 202 GWKVAAVSTPRGSSFEDARMTLDEVQAALTK--GTVIFNTAGSHIPKLAGATLACTDAAALPCALNMYVTAAGKRTSAPPHTDRQDVIVVQTQGKKHWKVYSPPDPAMKPEADMYARGKGDDNLPMYSLE-EGQYGCKKLLDVTLEEGDVLF 350
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Match: D7FYA0_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA0_ECTSI) HSP 1 Score: 163 bits (413), Expect = 3.600e-45 Identity = 91/161 (56.52%), Postives = 100/161 (62.11%), Query Frame = 1
Query: 1 AGRGTFSQGASGWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNSAGAYIRPLAGICLEVTEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFSPPPPQAKPKADPMARGKGADVLSLDELIGEGKEGALVDVVLEPGQVGF 483
AGRGTFSQG++GWRMAPVSTPRGKSFEDAKLRF+DV++AL++KSGT GRKRWRVF PPPPQAKPKADPMARGKGADVLSLDE+IG+GK GALVDVVLEPGQV F
Sbjct: 139 AGRGTFSQGSTGWRMAPVSTPRGKSFEDAKLRFDDVKSALKEKSGT----------------------------------------------------------GRKRWRVFPPPPPQAKPKADPMARGKGADVLSLDEMIGDGKPGALVDVVLEPGQVLF 241
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Match: A0A7S2EUF6_TRICV (Bifunctional lysine-specific demethylase and histidyl-hydroxylase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EUF6_TRICV) HSP 1 Score: 162 bits (411), Expect = 1.970e-44 Identity = 84/152 (55.26%), Postives = 109/152 (71.71%), Query Frame = 1
Query: 34 GWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNSAGAYIRPLAGICLEVTEALDIPVCLNLYITAAGQKTSAPPHTDKQDVFVMQTQGRKRWRVFSPPPPQAKPKADPMARGKGADVLSLDELIGEGKEGA--LVDVVLEPGQVGF 483
GW++A VS PRG SF+DA++ E++ +ALE+ GTV++++AGA+I LAG L T+A +P NLY+TAAG++TSAPPHTD+QDV V+QTQGRK WRV+ PP P ADP ARGKG D L L L +G+ G L+DV LEPG V F
Sbjct: 225 GWKVAAVSKPRGDSFDDARMTKEEIDSALEK--GTVILSAAGAHIPKLAGATLACTDASSLPCAANLYVTAAGKRTSAPPHTDRQDVVVVQTQGRKHWRVYGPPDAGRDPDADPFARGKGDDDLPLPSLE-DGRLGCEKLLDVTLEPGDVLF 373 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14268.3352.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14268.3352.1 >prot_H-canaliculatus_F_contig14268.3352.1 ID=prot_H-canaliculatus_F_contig14268.3352.1|Name=mRNA_H-canaliculatus_F_contig14268.3352.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=161bp AGRGTFSQGASGWRMAPVSTPRGKSFEDAKLRFEDVQAALEQKSGTVVVNback to top mRNA from alignment at H-canaliculatus_F_contig14268:371..2076- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14268.3352.1 ID=mRNA_H-canaliculatus_F_contig14268.3352.1|Name=mRNA_H-canaliculatus_F_contig14268.3352.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1706bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14268:371..2076- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14268:371..2076- >mRNA_H-canaliculatus_F_contig14268.3352.1 ID=mRNA_H-canaliculatus_F_contig14268.3352.1|Name=mRNA_H-canaliculatus_F_contig14268.3352.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=966bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14268:371..2076- (Hapterophycus canaliculatus Oshoro5f female)back to top |