prot_H-canaliculatus_F_contig1398.3152.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1398.3152.1
Unique Nameprot_H-canaliculatus_F_contig1398.3152.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length452
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1398.3152.1 vs. uniprot
Match: D8LKD1_ECTSI (Aardvark n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD1_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 1.250e-33
Identity = 361/424 (85.14%), Postives = 381/424 (89.86%), Query Frame = 0 
Query:    1 MFGRKRSSKGAGKRRGKSKKNSKAKKVVKRLLEKPGPDRMADVAKMAAVENLQPFVGSGLGQAGACDAVAVVMAMFPEHRFVQVEACRAVEALADGNEENVQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLFNGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANNSKSNRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQALVWLTSKNRAGTMISMKKLTGPESRRQQSR-KAR-DTSFGGSSVGST-----NRGRGPRRLKRGGGFESLSE 417
            MFGRKR +K +   RG SK N+KAKK VKRLLEKPGP+RMA +A +AA ENL PF GS LG+A AC+AVA VM+MFPEHR VQVEACRAVEALADG EENVQL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLF+GE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ANNSKSNRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   QAL WL+SKNR GT +SMKKLTGPESRRQQ+R +AR  +SFGGSS G+      NRGRG R  +R G F+S+ +
Sbjct:    1 MFGRKRGAKAS---RGASKGNAKAKKAVKRLLEKPGPERMAVLANLAAAENLHPFNGSALGEADACNAVATVMSMFPEHRQVQVEACRAVEALADGTEENVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLFSGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANNSKSNRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEQALEWLSSKNRVGTTLSMKKLTGPESRRQQARVRARTSSSFGGSSFGAGDNTRGNRGRGGRDQERKGSFDSVDD 421
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1398.3152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKD1_ECTSI1.250e-3385.14Aardvark n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 412..432
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 152..237
coord: 292..362
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 62..141
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 234..302
IPR000225ArmadilloSMARTSM00185arm_5coord: 228..270
e-value: 41.0
score: 8.5
coord: 97..139
e-value: 9.6
score: 13.4
coord: 183..226
e-value: 4.6
score: 15.8
coord: 140..182
e-value: 31.0
score: 9.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 16..378
e-value: 1.0E-38
score: 135.1
IPR040104Armadillo repeat-containing protein 6PANTHERPTHR22895:SF0ARMADILLO REPEAT-CONTAINING PROTEIN 6coord: 234..302
IPR040104Armadillo repeat-containing protein 6PANTHERPTHR22895:SF0ARMADILLO REPEAT-CONTAINING PROTEIN 6coord: 62..141
coord: 292..362
IPR040104Armadillo repeat-containing protein 6PANTHERPTHR22895:SF0ARMADILLO REPEAT-CONTAINING PROTEIN 6coord: 152..237
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 80..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1398contigH-canaliculatus_F_contig1398:1455..7488 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1398.3152.1mRNA_H-canaliculatus_F_contig1398.3152.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1398 1455..13263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1398.3152.1 ID=prot_H-canaliculatus_F_contig1398.3152.1|Name=mRNA_H-canaliculatus_F_contig1398.3152.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=452bp
MFGRKRSSKGAGKRRGKSKKNSKAKKVVKRLLEKPGPDRMADVAKMAAVE
NLQPFVGSGLGQAGACDAVAVVMAMFPEHRFVQVEACRAVEALADGNEEN
VQLLGEADCCELVEKALDRFPNDPSIQTQGCRAVTNLFNGEANIRKLGQG
RACELVTEALRKFPKDADVQIEACGAVANLANNSKSNRIKLGRAGACSLV
TTCMSTFPDNIDVQHAACVAVGNLANRHAENKKRLGTAGACNKVCAALAS
FQGDLGVQYMGCGAVGNLSNSNAQNCTRLGEAGGCLLVTGGMNAFQDDRN
LQHVGCAAVANLAINNPSNAERLVKAGAGRAVQRALDVFTEDEEIQTRGQ
QALVWLTSKNRAGTMISMKKLTGPESRRQQSRKARDTSFGGSSVGSTNRG
RGPRRLKRGGGFESLSEEDEEEEEEEEEEGEEKCVLTETEHEDDEDDDDG
YD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR040104ARMC6
IPR011989ARM-like
IPR000225Armadillo