mRNA_H-canaliculatus_F_contig1373.2984.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1373.2984.1
Unique NamemRNA_H-canaliculatus_F_contig1373.2984.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Match: D7FZR8_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR8_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 1.800e-99
Identity = 151/241 (62.66%), Postives = 184/241 (76.35%), Query Frame = 1 
Query:  115 GPG----GWERQFLIGNVHYGFCEYYQTLVAEGLADRIQKLADYHPTFTILVTGHSLGAAAAAVCATDLTQRLGIESERVLLYTLGEPRTGDGVFATGLEDYVGTAYRIVHHRDVVPHLALCCHGWLGRCEANKGSCPYQHSTEIVYDNAMGPHDKWLTCDDIVGEDYACDPQDWDLSVADHLNYFQIAVGQYCNTAPEDLTPPHVAQAEDEERWAEYDSTMYAEDERLRAEVELLEA*GK 825
            GPG    G + Q LIGNVH+GFCE+YQTLVAEGLA ++  LA  HPT+TI VTGHSLG AAAAVCA DL +RLG+ SERV+LYTLGEPR GDG+FA G+ ++VGTAYRIVH +D+VPHL+LCCHGWLG+C   + +CPYQHSTEIVY N M     W+ C+D VGEDYACDPQ WDLS+ADH++YF   VGQYCNT PEDL P  +AQ E++ +WA Y++ M  ED+  R    L +  G+
Sbjct:  264 GPGAGDDGEDDQLLIGNVHFGFCEFYQTLVAEGLAAKVLHLARKHPTYTIFVTGHSLGGAAAAVCAADLVERLGVASERVVLYTLGEPRAGDGIFADGINEHVGTAYRIVHDKDLVPHLSLCCHGWLGKCIGGEEACPYQHSTEIVYANDMSDGSPWIQCNDTVGEDYACDPQGWDLSIADHVSYFARTVGQYCNTPPEDLKPFPLAQEEEKAKWAPYEAAMRQEDDAYRPMERLRDGCGR 504
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BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Match: A0A6H5KHF8_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHF8_9PHAE)

HSP 1 Score: 306 bits (784), Expect = 3.630e-92
Identity = 137/196 (69.90%), Postives = 161/196 (82.14%), Query Frame = 1 
Query:  124 GWERQFLIGNVHYGFCEYYQTLVAEGLADRIQKLADYHPTFTILVTGHSLGAAAAAVCATDLTQRLGIESERVLLYTLGEPRTGDGVFATGLEDYVGTAYRIVHHRDVVPHLALCCHGWLGRCEANKGSCPYQHSTEIVYDNAMGPHDKWLTCDDIVGEDYACDPQDWDLSVADHLNYFQIAVGQYCNTAPEDLTP 711
            G + + LIGNVH+GFCE+YQTLVAEGLA ++  LA  HPT+TI VTGHSLG AAAAVCA DL +RLG+ SERV+LYTLGEPR GDGVFA G+ ++VGTAYRIVH +D+VPHL+LCCHGWLG+C   + +CPYQHSTEIVY N M     W+ CDD+VGEDYACDPQ WDLS+ADH++YF   VGQYCNT PEDL P
Sbjct:  263 GEDDRLLIGNVHFGFCEFYQTLVAEGLATKVLHLARKHPTYTIFVTGHSLGGAAAAVCAADLVERLGVASERVVLYTLGEPRAGDGVFADGINEHVGTAYRIVHDKDLVPHLSLCCHGWLGKCIGGEEACPYQHSTEIVYANDMSDGSPWIQCDDMVGEDYACDPQGWDLSIADHVSYFARIVGQYCNTPPEDLKP 458
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BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Match: W7U7Q2_9STRA (Lipase class 3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U7Q2_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.190e-44
Identity = 112/290 (38.62%), Postives = 153/290 (52.76%), Query Frame = 1 
Query:   25 EAFGYVGVDASEKRIVVAFKGTSDTRDWVRGP-GGWERQFL-------IGNVHYGFCEYYQTLVAEGLADRIQKLAD-YHPTFTILVTGHSLGAAAAAVCATDLTQRLGIESERVLLYTLGEPRTGDGVFATGLEDYVGTAYRIVHHRDVVPHLALCCHGWLGRCEANKGSCPYQHSTEIVYDNAMGPHDKWLTCDDIVGEDYACDPQDWDLSVADHLNYFQIAVGQYCNTAPEDLTPPHVAQAEDEERWAEYDSTMYAEDERLRAEVELLEA*GKT*TKSEAEVHGFQA 867
            +AFGY+GVD  EK +VVAFKG++DT D++    G     F        +G+ H+GFC +Y +LV  GLA+ +  LA      +T+LVTGHSLG   A++CA DL +RL + S   LLYT GEPR GD  FAT + +Y   +YR+VH  D VPHL  CC G  G   A    CP+ H  EI YD+ M    +++ C     ED   +      SV DH  YF   +G +C   P    PP           +E  S M  +   +   ++ LE+ G+  ++SEAE  G  A
Sbjct:  151 DAFGYIGVDKEEKLVVVAFKGSNDTEDYITDLIGSLHYHFSCVIEGVDLGHTHHGFCAFYTSLVTLGLAEEVAALAARMGEEYTVLVTGHSLGGGVASLCAVDLGKRLNVSS---LLYTFGEPRAGDVGFATAVAEYTRGSYRLVHASDCVPHLPPCCGGVDGGHCAEVADCPFHHGQEIWYDDDMSVGAQYVACPGDEDEDVCSNGSI--SSVEDHHYYFGERLGTWCCFPP----PP-----------SERSSEMERKHTMIEQRIKTLESHGRM-SRSEAERTGVTA 419
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BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Match: A0A7S4EY64_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EY64_CHRCT)

HSP 1 Score: 160 bits (405), Expect = 4.160e-40
Identity = 100/229 (43.67%), Postives = 122/229 (53.28%), Query Frame = 1 
Query:    7 FVGDETEAFGYVGVDASEKRIVVAFKGTSDTRDWVRGPGGWERQF---------LIGNVHYGFCEYYQTLVAEGLADRIQKLADYHPTFTILVTGHSLGAAAAAVCATDLTQRLGIESERVLLYTLGEPRTGDGVFATGLEDYVGTAYRIVHHRDVVPHLALCCHGWLGRCEANKGSCPYQHSTEIVYDNAMGPHDKWLTCDDIVGEDYACDPQDWDLSVADHLNYFQI 666
            F   E   F YVGVD + K +V +FKGT+DT DW+    G E  F           G VH GFCEYY  L   G+A     L + H  +T ++TGHSLG AAAA+ A D+ +         LLYT G PR GD  FA  L   V  AYRIVH RD+VPHL  C  G LG C   K + P+  +TE+ Y NAM   D +  CD   GED  C      +SV+DH +YF I
Sbjct:   67 FRRSENAGFAYVGVDHARKWVVASFKGTNDTVDWMHDLQGLEFSFDPCRLPSGNTRGTVHKGFCEYYVKLAKLGVAGNFTALMEKHSDYTPVMTGHSLGGAAAALMAYDVYE-YSRGRAAALLYTYGMPRVGDFEFAKALNARVANAYRIVHARDIVPHLPPCV-GLLG-CSQGK-AMPHHTATEVFYPNAMRSGDNFTICDG-SGEDSHCSNGVAHISVSDHCSYFGI 290
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BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Match: A0A7S4BC24_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BC24_CHRCT)

HSP 1 Score: 160 bits (405), Expect = 2.110e-39
Identity = 100/229 (43.67%), Postives = 122/229 (53.28%), Query Frame = 1 
Query:    7 FVGDETEAFGYVGVDASEKRIVVAFKGTSDTRDWVRGPGGWERQF---------LIGNVHYGFCEYYQTLVAEGLADRIQKLADYHPTFTILVTGHSLGAAAAAVCATDLTQRLGIESERVLLYTLGEPRTGDGVFATGLEDYVGTAYRIVHHRDVVPHLALCCHGWLGRCEANKGSCPYQHSTEIVYDNAMGPHDKWLTCDDIVGEDYACDPQDWDLSVADHLNYFQI 666
            F   E   F YVGVD + K +V +FKGT+DT DW+    G E  F           G VH GFCEYY  L   G+A     L + H  +T ++TGHSLG AAAA+ A D+ +         LLYT G PR GD  FA  L   V  AYRIVH RD+VPHL  C  G LG C   K + P+  +TE+ Y NAM   D +  CD   GED  C      +SV+DH +YF I
Sbjct:  136 FRRSENAGFAYVGVDHARKWVVASFKGTNDTVDWMHDLQGLEFSFDPCRLPSGNTRGTVHKGFCEYYVKLAKLGVAGNFTALMEKHSDYTPVMTGHSLGGAAAALMAYDVYE-YSRGRAAALLYTYGMPRVGDFEFAKALNARVANAYRIVHARDIVPHLPPCV-GLLG-CSQGK-AMPHHTATEVFYPNAMRSGDNFTICDG-SGEDSHCSNGVAHISVSDHCSYFGI 359
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BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Match: A0A7S2WV81_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV81_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.990e-38
Identity = 90/235 (38.30%), Postives = 127/235 (54.04%), Query Frame = 1 
Query:   10 VGDETEAFGYVGVDASEKRIVVAFKGTSDTRDWVRGPGGWERQFL--------IGNVHYGFCEYYQTLVAEGLADRIQKLADYHPTFTILVTGHSLGAAAAAVCATDLTQRLGIESERVLLYTLGEPRTGDGVFATGLEDYVGTAYRIVHHRDVVPHLALCCHGWLGRCEANKGSCPYQHSTEIVYDNAM--GPHDKWLTCDDIVGEDYACDPQDWDLSVADHLNYFQIAVGQYC 684
            +   T AF YVGVD+    +V AFKG++ T D+     G  R F          G+VH GFC YY+ +   G A         +PT+T ++ GHSLG AAA + A D+  +  ++S   ++YT G+PR G+  F+      V  AYR+VH  D+V HL  CC G  G  +  +  CPY  + EI Y+N M     D ++TCD   GED +C+    +LS++DHL YF+I VG  C
Sbjct:   78 ITQSTHAFAYVGVDSERGWVVGAFKGSNQTADFATDISGGLRLFSSCEIAGNNFGHVHKGFCNYYKGISEAGFASAFSSALKANPTYTPIMIGHSLGGAAAVLAAMDIHAQFQVQS---VVYTYGQPRVGNYDFSQDFSSAVAEAYRVVHSSDMVAHLPYCCVGLSGCRKTTE--CPYHTTDEIWYNNDMDLAAGDTYVTCDG--GEDSSCE-NTINLSISDHLKYFEIDVGNAC 304
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BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Match: A0A7S2HQX8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQX8_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.800e-37
Identity = 92/241 (38.17%), Postives = 130/241 (53.94%), Query Frame = 1 
Query:    1 KTFVGDETEAFGYVGV--DASEKRIVVAFKGTSDTR-DWVRGPGGWERQFL--------IGNVHYGFCEYYQTLVAEGLADRIQKLADYHPTFTILVTGHSLGAAAAAVCATDLTQRLGIESERVLLYTLGEPRTGDGVFATGLEDYVGTAYRIVHHRDVVPHLALCCHGWLGRCEANKG-SCPYQHSTEIVYDNAMGPHDKWLTCDDIVGEDYAC-DPQDWDLSVADHLNYFQIAVGQYC 684
            + +  +  +A G+V V    +   ++ +F GT+ ++ D+     G E  F         +GNVH GFC YY +L ++G+ADR  +L   +PT+  +VTGHSLGAAAAAV A DL  R  I      LYT G+PR G   F+  + D    AYR+VH +D++ HL  CC       +  KG +CPY    E+ YDN M     ++ C+   GED +C D     L+V DHLNYF   +G YC
Sbjct:   46 EVYYSNTYDAQGFVAVLNVTANPLVIASFMGTNGSKQDFADDLSGGEFSFSTCEIEGNKLGNVHDGFCSYYNSLQSKGMADRFAELVALYPTYLPIVTGHSLGAAAAAVMAVDLNARYEISP---YLYTFGQPRVGGYSFSESIGDATAKAYRVVHKKDMIAHLPPCC---AVAYKCYKGDTCPYHTGHEVWYDNNMKDSSDYVECNQ--GEDTSCSDSLMVALNVDDHLNYFNTELGDYC 278
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BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Match: A9V5U1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V5U1_MONBE)

HSP 1 Score: 130 bits (328), Expect = 3.450e-30
Identity = 84/225 (37.33%), Postives = 115/225 (51.11%), Query Frame = 1 
Query:    7 FVGDETEAFGYVGVDASEKRIVVAFKGTSDTRDWVRGPGGWERQFLIGN------VHYGFCEYYQTLVAEGLADRIQKLADYHPTFTILVTGHSLGAAAAAVCATDLTQRLGIESERVLLYTLGEPRTGDGVFATGLEDY-VGTAYRIVHHRDVVPHLALCCHGWLGRCEANKGSCPYQHSTEIVYDNAMGPHDKWLTCDDIVGEDYACDPQDW-DLSVADHLNY 657
            F   ET+  GY+G+D + KRI+VAF+GT D   W+     ++             VH GF + Y+  V + +   + +    +P +TILVTGHSLGAA AA+C+ DL+  +G    R+L YT G+PR G+  FA   E + +   YR+ H+ D VPHL L   G+            Y  STE+ Y            CD   GED  C  Q W DL V+DHLNY
Sbjct:   57 FHASETDTNGYIGIDEAGKRIIVAFQGTHDLTQWIDDLDFFKADLQYPGASSDVKVHSGFYKAYRQ-VKQNVDQVVNQTLFNNPEYTILVTGHSLGAALAAMCSLDLS--IGHPQARILHYTYGQPRVGNQAFAQFYESHNLAQHYRMTHNEDPVPHLPLESMGF------------YHISTEVYYGEKFEGQSSLKVCDG-SGEDPNCSNQHWTDLKVSDHLNY 265
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BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Match: F2U8A9_SALR5 (Lipase_3 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8A9_SALR5)

HSP 1 Score: 120 bits (302), Expect = 2.530e-26
Identity = 80/236 (33.90%), Postives = 122/236 (51.69%), Query Frame = 1 
Query:    7 FVGDETEAFGYVGVDASEKRIVVAFKGTSDTRDWVRGPGGWERQFLIGNVHY-----------GFCEYYQTLVAEGLADR-IQKLADYHPTFTILVTGHSLGAAAAAVCATDLTQRLGIESERVLLYTLGEPRTGDGVFATGL-EDYVGTAYRIVHHRDVVPHLALCCHGWLGRCEANKGSCPYQHSTEIVYDNAMGPHDKWLTCDDIVGEDYACDPQ-DWDLSVADHLNYFQIAV 672
            F   +T  +GYVG+D+  K IVVAF+GT + + W+      + +F+  ++HY           GF E YQ +  +G  DR ++     +P + ILVTGHSLGAA AA+C+ DL+  +   S  +  YT G+PR G+  F     +  +  ++R VH+RD+VPHL L   G+            +  +TE+ Y       +    C+   GED  C  Q + D+S++DHLNY    V
Sbjct:  101 FYAKKTSTYGYVGLDSVNKYIVVAFQGTHNLKQWID-----DLKFMKTDLHYPGAGSDVKVHRGFYEAYQEV--KGTVDRFVESTFRQNPNYRILVTGHSLGAALAAMCSLDLS--IQFPSASIYHYTFGQPRVGNAPFYDFFKQSSIKASFRFVHNRDIVPHLPLEAMGF------------HHIATEVFYKEQFSGPESLHECNG-SGEDPDCSDQFNVDISISDHLNYLGFTV 314
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BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Match: A0A811L1N8_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811L1N8_9BILA)

HSP 1 Score: 118 bits (295), Expect = 6.570e-26
Identity = 75/224 (33.48%), Postives = 113/224 (50.45%), Query Frame = 1 
Query:   10 VGDETEAFGYVGVDASEKRIVVAFKGTSDTRDWVRGPGGWERQFLI-----GNVHYGFCEYYQTLVAEGLADRIQKLADYHPTFTILVTGHSLGAAAAAVCATDLTQRLGIESERVLLYTLGEPRTGDGVFATGLEDYVGTAYRIVHHRDVVPHLA-LCCHGWLGRCEANKGSCPYQHSTEIVYDNAMGPHDKWLTCDDIVGEDYACDPQDWDL-SVADHLNYF 660
            +GD    +G+ GV   +K + +A++GT+     +        Q ++     GNV   F   Y+ L   GL + +  LA+ +P + I +TGHSLG A A++ A +L +   I S+R+L+ T GEPRTGD  +A   +  V   YR+V+ RD+VPHL  L    ++             HS E+ Y+  M    ++ TC     E   C  Q  DL SVADHL Y+
Sbjct:   35 LGDYKLCYGFTGVAHEDKVVFLAYRGTAGFFQLITETYQTAFQPMVEAKIGGNVSEYFYGVYENLQTAGLNEEVLALANQYPDYRIWITGHSLGGALASISAAELVKIQNISSDRILIITFGEPRTGDSEYANNYDALVPNTYRVVNQRDIVPHLPPLRLFDYI------------HHSQEVWYEYGMANISEYKTC---PAESCDCSNQYGDLYSVADHLTYY 243
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1373.2984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZR8_ECTSI1.800e-9962.66Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KHF8_9PHAE3.630e-9269.90Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
W7U7Q2_9STRA1.190e-4438.62Lipase class 3 n=3 Tax=Monodopsidaceae TaxID=42507... [more]
A0A7S4EY64_CHRCT4.160e-4043.67Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4BC24_CHRCT2.110e-3943.67Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S2WV81_9STRA1.990e-3838.30Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2HQX8_9STRA3.800e-3738.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A9V5U1_MONBE3.450e-3037.33Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
F2U8A9_SALR52.530e-2633.90Lipase_3 domain-containing protein n=1 Tax=Salping... [more]
A0A811L1N8_9BILA6.570e-2633.48Hypothetical protein n=1 Tax=Bursaphelenchus okina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1373contigH-canaliculatus_F_contig1373:16362..22178 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.6
Seed ortholog evalue2.8e-87
Seed eggNOG ortholog2880.D7FZR8
EggNOG free text desc.phospholipase A1 activity
EggNOG OGsKOG4569@1,KOG4569@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size2338
Cds size819
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929113.893655-CDS-H-canaliculatus_F_contig1373:16361..164881622929113.893655-CDS-H-canaliculatus_F_contig1373:16361..16488Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 16362..16488 +
1696845684.0909586-CDS-H-canaliculatus_F_contig1373:16361..164881696845684.0909586-CDS-H-canaliculatus_F_contig1373:16361..16488Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 16362..16488 +
1622929113.9102614-CDS-H-canaliculatus_F_contig1373:17191..174751622929113.9102614-CDS-H-canaliculatus_F_contig1373:17191..17475Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 17192..17475 +
1696845684.1055753-CDS-H-canaliculatus_F_contig1373:17191..174751696845684.1055753-CDS-H-canaliculatus_F_contig1373:17191..17475Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 17192..17475 +
1622929113.9235718-CDS-H-canaliculatus_F_contig1373:18388..185111622929113.9235718-CDS-H-canaliculatus_F_contig1373:18388..18511Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 18389..18511 +
1696845684.1189778-CDS-H-canaliculatus_F_contig1373:18388..185111696845684.1189778-CDS-H-canaliculatus_F_contig1373:18388..18511Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 18389..18511 +
1622929113.9471726-CDS-H-canaliculatus_F_contig1373:19419..195061622929113.9471726-CDS-H-canaliculatus_F_contig1373:19419..19506Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 19420..19506 +
1696845684.1273046-CDS-H-canaliculatus_F_contig1373:19419..195061696845684.1273046-CDS-H-canaliculatus_F_contig1373:19419..19506Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 19420..19506 +
1622929113.962568-CDS-H-canaliculatus_F_contig1373:20142..202401622929113.962568-CDS-H-canaliculatus_F_contig1373:20142..20240Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 20143..20240 +
1696845684.135759-CDS-H-canaliculatus_F_contig1373:20142..202401696845684.135759-CDS-H-canaliculatus_F_contig1373:20142..20240Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 20143..20240 +
1622929113.9733548-CDS-H-canaliculatus_F_contig1373:20559..206591622929113.9733548-CDS-H-canaliculatus_F_contig1373:20559..20659Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 20560..20659 +
1696845684.1443005-CDS-H-canaliculatus_F_contig1373:20559..206591696845684.1443005-CDS-H-canaliculatus_F_contig1373:20559..20659Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1373 20560..20659 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929113.9863725-UTR-H-canaliculatus_F_contig1373:20659..221781622929113.9863725-UTR-H-canaliculatus_F_contig1373:20659..22178Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1373 20660..22178 +
1696845684.1638153-UTR-H-canaliculatus_F_contig1373:20659..221781696845684.1638153-UTR-H-canaliculatus_F_contig1373:20659..22178Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1373 20660..22178 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1373.2984.1prot_H-canaliculatus_F_contig1373.2984.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1373 16362..20659 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1373.2984.1

>prot_H-canaliculatus_F_contig1373.2984.1 ID=prot_H-canaliculatus_F_contig1373.2984.1|Name=mRNA_H-canaliculatus_F_contig1373.2984.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=273bp
KTFVGDETEAFGYVGVDASEKRIVVAFKGTSDTRDWVRGPGGWERQFLIG
NVHYGFCEYYQTLVAEGLADRIQKLADYHPTFTILVTGHSLGAAAAAVCA
TDLTQRLGIESERVLLYTLGEPRTGDGVFATGLEDYVGTAYRIVHHRDVV
PHLALCCHGWLGRCEANKGSCPYQHSTEIVYDNAMGPHDKWLTCDDIVGE
DYACDPQDWDLSVADHLNYFQIAVGQYCNTAPEDLTPPHVAQAEDEERWA
EYDSTMYAEDERLRAEVELLEA*
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mRNA from alignment at H-canaliculatus_F_contig1373:16362..22178+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1373.2984.1 ID=mRNA_H-canaliculatus_F_contig1373.2984.1|Name=mRNA_H-canaliculatus_F_contig1373.2984.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5817bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1373:16362..22178+ (Hapterophycus canaliculatus Oshoro5f female)
AAGACTTTCGTCGGAGATGAGACGGAGGCGTTCGGCTACGTCGGGGTCGA
CGCATCGGAGAAGCGGATCGTCGTGGCCTTCAAGGGCACCAGCGACACGC
GCGACTGGGTGAGGGGACCGGGTGGCTGTGCAGTGTCCCCTCGGCCGCAG
GGGTCTGCCGCACGAGGGATTTGCTGACGGCGTGCGGGTGTCGGCGGCGA
GGGGTTGGTAGAGAGACGGTAGGGAGAGGCGTGAAGGAGAGACCGGGAGC
ACGGGGCAAGAGAGGAGGGAGAACGGTGGGCGGTTTACAGCCACGAAATA
AATCTTAAGACATTTACGAAGACGTCTACGAAAATGAAACGCTCACTCTT
CACAAGACAAAATCGGGGTAGGAAGATCGATGAGCGTAGATCACAGCAGT
CATGACGAGGAACTCCCGAGGCAGGAGCACGACCCATCCGTGTATGGGTT
GCAGCAAACCATGTCCCCGTCATCTGAATGGCGGGCCCACTCCGCAAGAT
GACCCCCCAAAGCGATTGTTCACGCATCCCCCCCCCCCCCATGCCCGCCC
GCTGCCTCCTCGTTTTCTTCTCGCCGCCGCCCTACACCGGCGATGCCCTC
GGACCACGACACGAAAAACGTTTCGCGTAACAACAACAAACACATGCAGG
TGACGAACCTGCGAACCTGGGTGCGGTACCAGGAGCAGTGCGAGCCAAGG
AGAGACCCAAACGCCCCAACCGCCGTGGAGGGCGCGCGCGGCGACACCGG
TCTGGAGGCCGGTGGTCAGTTCGCGGAAGACGGTGCCGCCGCCGCCGCCG
CCGCTGGGGCGGCGGCGGCTCCCTCGGAAGGGGAGAGGCAATTCCTGATC
GGGAACGTGCACTACGGCTTCTGCGAGTACTACCAGACCCTCGTGGCGGA
GGGGCTCGCGGACAGGATCCAGAAGCTCGCCGACTACCACCCCACCTTCA
CGATTTTGGTCACGGGGCACTCGCTGGGCGCCGCGGCGGCGGCCGTCTGC
GCCACGGACCTGACCCAGAGGCTGGGCATCGAGAGCGAGAGGGTGTTGCT
GTACACCCTCGGGGAGCCCAGGACCGGGGACGGGGTTTTCGCGACCGGAT
TGGAAGACTATGTGGTGAGGACGCGCGGCAAGTGTTGTCGAGCGGGCTTT
GACCTCGCCCTCCGGTTTGTATTCGCCTTCGTGTGCTTGTTACCATGAGC
GTGTTCGCAAAATGTTTATTTAACTTGTTTCTTCTCGTCTGCGGATTCAT
TGGTCGTCCATACACATTAACCCCGCGTCCTTAGTATTTTAAAAGAAGTC
GATACAAAACCGTTGGAACACATCCTGAGGAACGCCATGTGAGACGTACC
TGGAGGCTTGTGTCGAGTTCCCAAGCAGTGAGGGCTCATTGTCTACGTAG
GGACAAAAACATGAACAGAAAAAAAAGTTGTGAAAACTCCGTGCAGCAAT
TTGCGCGGTGGAGAAGAGCTTCGGCGTGACCATGGGTGGTATTTCGTCGC
TCGTGACCTCGCACTTCTGTTGCCTCTTGATAAAGTTGGCGGGGTTGGTC
TCGGAGAACATGCGCGGATTTGACTTGGGGGTTCACGCTGCGTAGCAGAA
TTTCGTGTTGAACAGCTAGGCCTGTCGGCCTCCGATGTTCTACAAGAAAT
AATCAACATCTCCGAAGGAGTACCCACCGCAGAGACAGCGTAATAGCGAC
GCGGGAGGATTTTCGTTGAATTCCTGACGATGAGGATTCACTGTGTTTTG
TTGCGTGCGGTTCGTTGTCGCGGTTCTCTCGTGCAAGTTGCTCTGCTCCA
CGCGTTGTTGCCCAGTCAGAGACAAGTGCCATGCGATGGCGCGGTTCACA
TAAGAACCTGCCGGCCGTTCGGCTCGTAAAATGGTAGTGCCGATTTTCTC
TCTCTCCTGGGCTTCACTTTCTTTCTTCAATTTTTTTTTCACACCGCCAC
CAGTGACGCTTTTGGTCGATATGTATCGTCGTCGCCGACCCCCTCTCCCC
TGCCCCCCTTCCCCTCGCCCCGCTCAGGGAACCGCCTACCGCATCGTGCA
TCACCGAGACGTGGTGCCGCACCTGGCGCTGTGCTGCCACGGTTGGCTGG
GCAGATGCGAGGCCAACAAGGGCTCATGCCCCTACCAGCACTCCACGGAG
GTTTGTGTGTGTGTGTGTGTGTGTGTGTTTGTCTTTCTGTGTCTGTCTGT
GTCTGTGTCTGCAGGTGTGTATGCGTGTGTGTGTGTGTTTCTATGCGTGC
GTGCGTGCGTGTCTGTTTGTGCGTGCGTGCGCGTTCTGCGATTTTTTCTG
GCCTGTGTGTGGTGTCTGTCGACCGCAGTTTTTCTCGGTTGGTCAAAGAG
AAAATGCTTGTACGCGAGATGTACCGCTTGCGGTCACCAGAATATCAGCA
CTTGCCTCCATCGCGAGGAGTGTTTCGAGCTTCTGTGTCCCGCGGCAGGG
GCTCTCTTGCAAAATCGATGCCTGAGTTCCTCCCTGTGGTCGTCGTGCTT
AGGTGATCGGTGACGCAATAATTTGCCGGCAACCGAGGCCTATGGAGGTA
GACTCCCCTCCCCTCTCCCTTCATTGTTTCTTTGATGTCTGCCTTGCTCG
TGACCTCGAAAGTCCTCCTTTCTGGTGGCATGCGCCCCGCGAAAGGAAAG
CCCCCCCCCCATCCCGCCTCTATTCACGGGACCCCGTTTTCTGCCTTCCT
TCTCTGCCTTCCAAGTACAATGCAATAGTAGACCACAGCCTTCCTTGAAG
CGAGCCCCTTGTCGAGACAAACAAGGGGACGGGGGAAGGCGGAAGTAGAA
CCAACCGGGATCGGGAGGGCGAAGGGATGCGTGAAGAAGGGATAAGGAAA
TGCTCAACGAAAAGCGAAACACAACCGAAGGCATATACAAGGTATCACTA
CAAGAAAAGAGCCAAGCCGGTTGTGCTCGCGCTCTCCTCTACAGCAGTTG
GAGGGCTCGGTGAGCGGCGAATTTCGTCCAGACCGTGCCCGCTTGCCTGA
AAGACGGCGTTTCTTTTTTTGTGGCGCTTGCCCCGTCCCTCTGCTTCACT
TGTCCCAGATCGTGTACGACAACGCAATGGGACCGCATGACAAGTGGCTG
ACGTGCGATGATATCGTTGGGGAGGACTACGCGTGCGACCCCCAGGTACG
CATCTGCAGCGACGCTGTACCCAATGATGCCATTCAGCGCTGCCGCTAGA
TGTACGTTTGGCAACTCCATTGATGCGAGATACTGCTGCTTCCTCTTCTT
CTTTCGTCTCTTGAGACGTCCTTGTTTCTGTGAGGGGTTGAGCTTGGTCT
TCAAAAAGGAGTTGCCGCTGTGGCTGTCGCCGTTGTTGCGTCGACCCACC
GTTTGGATTCTCTCGCGAGCCATCGTGAACGAACCCGGTGCAGGTCGCTA
AGAATGACCCAACCTGCGAGAGCTGTCCCCCGTAGATCACGGCTTCGGCG
ATACTTTTAGGTAAAAACGAGAACAGAGGCGAAACGCTCGACATTTTGTC
GCCAAGATGCGCGGAAGTCCCGGGCCGAAGATACCTCCGTGGATGGTGCT
GCTCGTAGCGGCTTGTCCGACGGTTTCGTGTCCGGAGTTGGTTGTTTTTG
TTGCGAACGCGGTGCCTCTGACGGCGTTTCGATTGACCTCGTCGGGCGAG
GTCGTCCGCTGCTTCTCGCCCTCGCCGTCGTTTGCGGTCAAGGATTCCGG
TCTCACTCTCCCTCGCCCTCCCTCGCCCGACCTCCTCCCGTGCACACCCA
CACACGAACGTCACGCGACCTTGTCACCCAGGATTGGGACCTGAGTGTGG
CGGATCACCTGAACTACTTCCAGATCGCCGTCGGGCAGTACTGCAACACG
GCTCCGGAGGACTTGACTCCTCCCCACGTGTGAGTACCGCCAGTGCGTGA
CGCTTGGATTGCTGCAGAGTGTGACTCCGCTGGTGGCCGCTGCTCCGCAT
CACTTGCTCTGCAGCAGGCAATGTTTGCGTTATGAAAGTACATCGCAACG
GCGAGCCGAACGCGATGGGGGCCTTGCCTTGAAAAGCTTCGGAACGAGGG
CAGTGGGAGGGATAGTGCTTCACGGCTGCTTGCACAGGCGGCAACGCCGC
CACCGCCGTCGCCACCGCCACCGCCACCACAACAACAACACAAACACGTT
GACCGTTCTCAGCTTCCCACCTCTCGCCGCCGCACCCTCGATGTCCAGGG
CCCAAGCGGAAGACGAGGAGCGCTGGGCAGAATACGACAGCACTATGTAC
GCAGAGGACGAACGACTACGAGCTGAGGTAGAGCTCCTGGAGGCGTGAGG
CAAAACGTAGACGAAAAGTGAAGCCGAGGTGCACGGGTTTCAGGCTTTCC
AGTCGAAACTCCCGGCGACTGGCATGCCGGTGGTGAGAAAACGAGGTGCT
GGATTGCGCGCGCTGAAAAAAAAATCATCGGATGATATGGCGTCGTGTGC
GCGAGGGGGCGCTCAATGCGTCGTCGTATCGCGACACGTGTCTGTCGCGT
TTCTCGGGCCTCGCCCGTCTAGGGTCTCGTGAGATCGAAGAGTGGTCTGT
AGCGGCGTCTAAGCTCTTGTTTGTGGGAGGGCGGCGGGGCTAGGCGTCGC
CGTCGAGAGCGTGGCGGGCTAGTTGGTAGGGGAACACGATGACATGAGAT
GTCGTGCGGCGAGATAAGGAGGAGAAGGAGGTTCATGCGGCACGATTCGT
AGGTTTGCCTGCCTTTCTTCTGGGGTAAACGCATGACCATTGTTGTTGTT
GGCGGCGCTCGCGCTGGAAGAGCTGGAGGTTGTGGATGTTGTTGACGTTT
TTTTCCTCTGTTTTTGTGCCGTGTGTTTGCTATTTTGCCCGTGCTCTGTG
CTCTCGGGCAAAGGCTCTGCCCGAGACCGAGACCCTGAGGAGCAAGCACG
CCTATTGAAATAGGCGAAGGGGAAAGCGAGCGCGCGCCGCCGCGTATGTA
TGCGCCCGCACAAGTACACGTCTTGTTCGGTGACGTTCCAAGAATCACGC
GTTTTGAGGATTCCCCGCCCGGATGGACGGTCCATTTGTGCGACTGGAGG
CGAACGGTAGCCCACCAAGACGATCCATGATAGCACGCCGCGAAACGAAC
AACAGTAGATCGGCGGTGAACATACGAACGCTCGACGGCTAATCGCCCCG
CTCGCAGTAGAGGGCGCGAAAATTGCGGGAGGAGGGGGGGGCGTTCTAGA
CGCACTTTCACAGCATTTTGGTGGAGGTACAAATCTATGCGGTGCACCTC
ACAACCATCCATCGCATCATTATTTTCTAATTTTCGCCAAAAGAAGAAGA
TGGACTAAATGTCGATCCCCTGTTGAATGAAGTCTGTCAATCCCCCCGCC
CCACCCCGTCCCACGGATTTTTTTCACTCCCTGCCGACATTCGATTAAAC
TGCATGTTTCGTATTCCGCCTCGCCGGTTTTGTAGCTGAAGACTCTCATT
GCCGCTGGATAGATGTTGATGTGGCGCGGATGCGGAAGGGCGGGGTAGCA
GACTGGACACGCATGCACGAGAGTACCCCCTCAGCCGTTGCCCGGGGGGC
AGGTGGACCGGAAGTAACAGATGACTCGCTTTTTTTTCTTCTCCTTCGAA
GAATCGCAGAAGAAAGAAACGGTCTTGGTTGGTCTCGAACAGGAGAAGTG
CGAACGAGACGCAACAGCGCGGAAAAGGACGCTGCAATCTCTTCGTGGAA
AAAAAAAAACTTTTCGAGGCGGAGGGCGGATACCAGGATGAACCGCCCGT
TTGCACTGAATGAAGAGATTATTATGCCCAAATTGCGCGCTTCTTCCCGT
ATTGATTTCGATCTCCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1373:16362..22178+

>mRNA_H-canaliculatus_F_contig1373.2984.1 ID=mRNA_H-canaliculatus_F_contig1373.2984.1|Name=mRNA_H-canaliculatus_F_contig1373.2984.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1638bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1373:16362..22178+ (Hapterophycus canaliculatus Oshoro5f female)
AAGACTTTCGTCGGAGATGAGACGGAGGCGTTCGGCTACGTCGGGGTCGA
CGCATCGGAGAAGCGGATCGTCGTGGCCTTCAAGGGCACCAGCGACACGC
GCGACTGGGTGAGGGGACCGGGTGGCTAAGACTTTCGTCGGAGATGAGAC
GGAGGCGTTCGGCTACGTCGGGGTCGACGCATCGGAGAAGCGGATCGTCG
TGGCCTTCAAGGGCACCAGCGACACGCGCGACTGGGTGAGGGGACCGGGT
GGCTGGGAGAGGCAATTCCTGATCGGGAACGTGCACTACGGCTTCTGCGA
GTACTACCAGACCCTCGTGGCGGAGGGGCTCGCGGACAGGATCCAGAAGC
TCGCCGACTACCACCCCACCTTCACGATTTTGGTCACGGGGCACTCGCTG
GGCGCCGCGGCGGCGGCCGTCTGCGCCACGGACCTGACCCAGAGGCTGGG
CATCGAGAGCGAGAGGGTGTTGCTGTACACCCTCGGGGAGCCCAGGACCG
GGGACGGGGTTTTCGCGACCGGATTGGAAGACTATGTGGGGAGAGGCAAT
TCCTGATCGGGAACGTGCACTACGGCTTCTGCGAGTACTACCAGACCCTC
GTGGCGGAGGGGCTCGCGGACAGGATCCAGAAGCTCGCCGACTACCACCC
CACCTTCACGATTTTGGTCACGGGGCACTCGCTGGGCGCCGCGGCGGCGG
CCGTCTGCGCCACGGACCTGACCCAGAGGCTGGGCATCGAGAGCGAGAGG
GTGTTGCTGTACACCCTCGGGGAGCCCAGGACCGGGGACGGGGTTTTCGC
GACCGGATTGGAAGACTATGTGGGAACCGCCTACCGCATCGTGCATCACC
GAGACGTGGTGCCGCACCTGGCGCTGTGCTGCCACGGTTGGCTGGGCAGA
TGCGAGGCCAACAAGGGCTCATGCCCCTACCAGCACTCCACGGAGGGAAC
CGCCTACCGCATCGTGCATCACCGAGACGTGGTGCCGCACCTGGCGCTGT
GCTGCCACGGTTGGCTGGGCAGATGCGAGGCCAACAAGGGCTCATGCCCC
TACCAGCACTCCACGGAGATCGTGTACGACAACGCAATGGGACCGCATGA
CAAGTGGCTGACGTGCGATGATATCGTTGGGGAGGACTACGCGTGCGACC
CCCAGATCGTGTACGACAACGCAATGGGACCGCATGACAAGTGGCTGACG
TGCGATGATATCGTTGGGGAGGACTACGCGTGCGACCCCCAGGATTGGGA
CCTGAGTGTGGCGGATCACCTGAACTACTTCCAGATCGCCGTCGGGCAGT
ACTGCAACACGGCTCCGGAGGACTTGACTCCTCCCCACGTGATTGGGACC
TGAGTGTGGCGGATCACCTGAACTACTTCCAGATCGCCGTCGGGCAGTAC
TGCAACACGGCTCCGGAGGACTTGACTCCTCCCCACGTGGCCCAAGCGGA
AGACGAGGAGCGCTGGGCAGAATACGACAGCACTATGTACGCAGAGGACG
AACGACTACGAGCTGAGGTAGAGCTCCTGGAGGCGTGAGGCCCAAGCGGA
AGACGAGGAGCGCTGGGCAGAATACGACAGCACTATGTACGCAGAGGACG
AACGACTACGAGCTGAGGTAGAGCTCCTGGAGGCGTGA
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