mRNA_H-canaliculatus_F_contig1341.2781.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Match: D8LS83_ECTSI (Putative hydrolase of the alpha/beta fold superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS83_ECTSI) HSP 1 Score: 458 bits (1178), Expect = 2.550e-159 Identity = 216/316 (68.35%), Postives = 255/316 (80.70%), Query Frame = 2
Query: 8 LAYTTTRSRSGSVRGCLPTLSSCAAGNNPCRTSAPAGSGVGGKTAIPTSPGFRMFEEGKTDGPPILFVHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSNGHDHDNVEAEKNGYSIDEIVRRLETTVEEAGKGSPVTIVAHDWGCTFSFLVEKRRPELVRRMVAIDVGGAVEPNFLGLLVIISYHMWLIAAFRIGGVVGDTMARSFAWLVGAPSGARVAKARSCYPYYHWWKRRFDKNQEPIKDLMPDAPLLFLYGTAGYKRLLPFHADWWAKKVDEKKGSSAVAMTSSRHWVTADQPDDVNRRLDAFLEQK 955
++ T R R G +RGC PT C+ G R+ + TA T+P RMF +GK DGP +LFVHGWPDDH MWDKQV HLKDRYRC+TTDLPGFG DS+ +D D EKNGYSIDEIVRRLE T+E+AG G PVT++AHDWGCTFSFLVEK RPELV+RMVAIDVGGAVEP L++I+SYH+WLIAAFR+GG +GD MARSFA LVGAP+GARVA ARSCYPYYH+WKR+ DK+Q P+ +LMP APLLF YGTAGYKR++PFHADWWAKKV++K+GS +VAMT S+HWVT DQPDD+NR+LDAFLE+K
Sbjct: 8 VSMVTMRLRPGGLRGCRPT--GCSRGMIAARSRS---------TAASTTPALRMFSDGKDDGPVLLFVHGWPDDHQMWDKQVAHLKDRYRCVTTDLPGFGADSDEYDAD---VEKNGYSIDEIVRRLERTIEKAGNGEPVTLIAHDWGCTFSFLVEKNRPELVKRMVAIDVGGAVEPGLGSLIIIMSYHLWLIAAFRVGGPIGDVMARSFARLVGAPAGARVATARSCYPYYHYWKRKLDKSQGPMGNLMPGAPLLFAYGTAGYKRVMPFHADWWAKKVNDKEGSLSVAMTRSKHWVTVDQPDDLNRKLDAFLEKK 309
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Match: D8LS82_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS82_ECTSI) HSP 1 Score: 336 bits (862), Expect = 6.510e-112 Identity = 149/268 (55.60%), Postives = 196/268 (73.13%), Query Frame = 2
Query: 143 IPTSPGFRMFEEGKTDGPPILFVHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSNGHDHDNVEAEKNGYSIDEIVRRLETTVEEAGKGSPVTIVAHDWGCTFSFLVEKRRPELVRRMVAIDVGGAVEPNFLGLLVIISYHMWLIAAFRIGGVVGDTMARSFAWLVGAPSGARVAKARSCYPYYHWWKRRFDKNQEPIKDLMPDAPLLFLYGTAGYKRLLPFHADWWAKKVDEKKGSSAVAMTSSRHWVTADQPDDVNRRLDAFL 946
+ PG R F GK DGP ILFVHGWPDDH +WD QV HLKDR+RC+TTDLPGF D EK GYS +E+V+R+E T E G G P+ +VAHD+GC +SF E +RP+LVR+MVAIDVGGA++P+ G +++++Y +WL AAF +G +GD +ARSFAWL+G+PSGAR+A+A +CYPYYH WK E ++ +MP PL+FL+GTAG K+++ FHA WA+KV EK+GSS+ + + HWVT DQP++VNRRLD FL
Sbjct: 9 VDDQPGLRTFASGKEDGPVILFVHGWPDDHLLWDAQVTHLKDRFRCVTTDLPGFSGDD-------ARVEKWGYSTEEVVKRIERTAERVGNGQPIILVAHDFGCMYSFKFEAKRPDLVRKMVAIDVGGAMKPSICGAMLMVTYQLWLCAAFLLGRPIGDGIARSFAWLMGSPSGARIARASTCYPYYHTWKHILCSG-EKVRPMMPQCPLMFLHGTAGVKKIMTFHAARWAEKVQEKEGSSSQGIPQASHWVTRDQPEEVNRRLDEFL 268
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Match: D8LK39_ECTSI (Short chain dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK39_ECTSI) HSP 1 Score: 298 bits (764), Expect = 4.360e-97 Identity = 139/267 (52.06%), Postives = 185/267 (69.29%), Query Frame = 2
Query: 161 FRMFEEGKTDGPPILFVHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSNGHDHDNVEAEKNGYSIDEIVRRLETTVEEAGKGSPVTIVAHDWGCTFSFLVEKRRPELVRRMVAIDVGGAVE--PNFLGLLVIISYHMWLIAAFRIGGVVGDTMARSFAWLVGAPSGARVAKARSCYPYYHWWKRRFDKNQEPIKDLMPDAPLLFLYGTAGYKRLLPFHADWWAKKVDEKKGSSAVAMTSSRHWVTADQPDDV-NRRLDAFLEQ 952
R F EG GP ++FVHGWPDDHT+WD QV HLKDRYRC+TTDLPGF D +G D + K GYS +E+ +RLE T+E+ GKG PV +VAHDWGC ++F++EK RP+LV+++VA+DVGG + P+ L LL I Y +L+ AF IGG +GD MAR FA L GAP+ + VA+A CYPY H+WK + + + MP P+LF+YG+AG K+L+ FHADWW K+ ++KGSS V +T + HW+ + DV N RLD F +
Sbjct: 6 LRSFAEGNESGPTVVFVHGWPDDHTLWDAQVAHLKDRYRCVTTDLPGFSGDEDG-DGGTASSSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVGGGLSFWPS-LSLLSIALYQTYLMVAFLIGGRIGDAMARGFARLAGAPAASTVARASVCYPYIHFWKSQI-QTCLGMGPFMPRCPVLFMYGSAGMKKLMRFHADWWVDKISKRKGSSVVEVTEASHWLMRGRGGDVVNARLDTFFAE 269
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Match: B5JVQ5_9GAMM (Putative hydrolase of the alpha/beta fold superfamily n=1 Tax=gamma proteobacterium HTCC5015 TaxID=391615 RepID=B5JVQ5_9GAMM) HSP 1 Score: 181 bits (458), Expect = 6.680e-51 Identity = 98/282 (34.75%), Postives = 153/282 (54.26%), Query Frame = 2
Query: 161 FRMFEEGKTDGPPIL-FVHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSNGHDHDNVEAEKNGYSIDEIVRRLETTVEEAG---KGSPVTIVAHDWGCTFSFLVEKRRPELVRRMVAIDVGGAV--EPNFLGLLVIISYHMWLIAAF------RIGGVVGDTMARS-------FAWLVGAPSGARVAKARSCYPYYHWWKRRFDKNQEPIKDLMPDAPLLFLYGTAGYKRLLPFHADWWAKKVDEKKGSSAVAMTSSRHWVTADQPDDVNRRLDAFLE 949
+++ G D L F+HG+PDD +MWD QV + + R+RC+ +LP FG D VE + GY + ++R+L + KG P+T+V HDWG + +L +R PE V+R+VA+DVG A+ +PN +G L++ +Y + L +AF IG VG+ + + F P+ YPYY++WK Q P+ +PD P F YGT G K+++ FH + W KKV +K + VA S HW+ D+P+ +NR +++FL+
Sbjct: 16 ITIYDSGPKDAEETLVFLHGYPDDSSMWDLQVAYFEKRFRCLRPELPNFG--------DRVE-DPAGYDFESVIRQLGDALGAHSPKLKG-PLTLVVHDWGAVYGYLFAERYPERVKRLVALDVGAAIKKQPNPIGYLMVPAYQLTLASAFLISRVPAIGPFVGNLLTKGILAGLGLFGSQYSGPTRRTPLSPALNYPYYYFWKGVLT-GQLPLSMKLPDIPFFFAYGTRGLKKVMMFHDEAWLKKVSQKATNKVVAFEQSSHWLMRDEPEKLNREIESFLQ 286
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Match: A0A3N4DD41_9GAMM (Alpha/beta hydrolase n=2 Tax=Shewanella TaxID=22 RepID=A0A3N4DD41_9GAMM) HSP 1 Score: 175 bits (444), Expect = 4.040e-49 Identity = 90/255 (35.29%), Postives = 142/255 (55.69%), Query Frame = 2
Query: 200 ILFVHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSNGHDHDNVEAEKNGYSIDEIVRRLETTVEEAGKGSPVTIVAHDWGCTFSFLVEKRRPELVRRMVAIDVG--GAVEPNFLGL---LVIISYHMWLIAAFRIGGVVGDTMARSFAWLVGAPSGARVAKARSCYPYYHWWKRRFDKNQEPIKDLMPDAPLLFLYGTAGYKRLLPFHADWWAKKVDEKKGSSAVAMTSSRHWVTADQPDDVNRRLDAFLE 949
I+ +HGWPD + +WDKQVE LKD+YRC+ LPG+ +DSN + YS++EI+ ++ + V+ G PVT++ HDWGC F + R V R++ +D+G G++E L L L + SY MWL A+++GG +GD M R A ++ AP ++ + Y YY W + L+ + PLLF+YG + FH+ W K+ G+ V ++RHW+ A++P++ NR + +LE
Sbjct: 22 IVMIHGWPDTYRLWDKQVEVLKDKYRCVRFTLPGYELDSN----------RGMYSLEEIISKINSVVDAVSDGQPVTLLLHDWGCFFGYQFYLRNEIKVNRIIGVDIGDAGSIEHE-LSLKVKLFMFSYQMWLALAWKLGGSLGDAMTRKMAKMLKAPGDQKLITSSMTYSYYWKWSKTLTGKPLGNLPLVVNCPLLFMYGE---NKPGMFHSKEWEHKMACIPGNKVVPF-NTRHWIMAEEPEEFNRVMLEWLE 261
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Match: A0A6I3SYR5_9BURK (Alpha/beta fold hydrolase n=2 Tax=Massilia buxea TaxID=1949069 RepID=A0A6I3SYR5_9BURK) HSP 1 Score: 172 bits (435), Expect = 1.190e-47 Identity = 94/269 (34.94%), Postives = 138/269 (51.30%), Query Frame = 2
Query: 143 IPTSPGFRMFEEGKTDGPP-ILFVHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSNGHDHDNVEAEKNGYSIDEIVRRLETTVEEAGKGSPVTIVAHDWGCTFSFLVEKRRPELVRRMVAIDVGGAVEPNFL------GLLVIISYHMWLIAAFRIGGVVGDTMARSFAWLVGAPSGARVAKARSCYPYYHWWKRRFDKNQEPIKDLMPDAPLLFLYGTAGYKRLLPFHADWWAKKVDEKKGSSAVAMTSSRHWVTADQPDDVNR 928
I T G + EG GP IL +HGWPD+ +W+ QV K YRC+ PGF + +H S+D ++ E V E PV ++ HDWGC F + +R P+LV R+V +D+G A + L G L I++Y +WL AA+RIGG +G++M S A + P+ + YPYY W ++ + + P P+LF+YGT ++ FH+ WA+++D K GS AVAM + HW Q D N+
Sbjct: 3 IKTINGTEVLIEGS--GPETILLLHGWPDNRALWEGQVAAFKSHYRCVRFTWPGFEPGAPRGEH----------SLDSLIALCEAVVREVSPQRPVILLVHDWGCLFGYQFAQRHPDLVARIVGVDIGDAGSKDHLTDIGIKGKLGIVAYQLWLAAAWRIGGSIGESMTHSMARRMHVPAPPEALTVQKNYPYYSTWTGKY----KSARTFRPACPMLFIYGT---RKPFMFHSSAWARELDSKPGSRAVAMDTD-HWPMLRQTDAFNQ 251
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Match: A0A2N8ZDB0_9VIBR (AB hydrolase-1 domain-containing protein n=1 Tax=Vibrio tapetis subsp. tapetis TaxID=1671868 RepID=A0A2N8ZDB0_9VIBR) HSP 1 Score: 170 bits (431), Expect = 4.940e-47 Identity = 86/253 (33.99%), Postives = 133/253 (52.57%), Query Frame = 2
Query: 200 ILFVHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSNGHDHDNVEAEKNGYSIDEIVRRLETTVEEAGKGSPVTIVAHDWGCTFSFLVEKRRPELVRRMVAIDVGGAVEPNFL----GLLVIISYHMWLIAAFRIGGVVGDTMARSFAWLVGAPSGARVAKARSCYPYYHWWKRRFDKNQEPIKDLMPDAPLLFLYGTAGYKRLLPFHADWWAKKVDEKKGSSAVAMTSSRHWVTADQPDDVNRRLDAFL 946
I+ +HGWPD + +W QVEHLK +YRC+ LPG+ H +N Y +D ++ +++ VE G PVT++ HDWGC + + R V+R++ +DVG A P+ LV++SY +WL+AA+ IGG VGD M R A L AP+ + + + Y Y+ W F + K L P LF+YG ++ FH+ W K+ +G+ + + + HWV +QPD N + +L
Sbjct: 22 IVMLHGWPDTYRLWQPQVEHLKSQYRCVRFSLPGY---EKHHP-------RNYYDLDAVLSVIDSVVETVSNGKPVTLLLHDWGCVYGYQYYMRNQAKVKRIIGVDVGDAGSPDMTLSTKAKLVLVSYQLWLMAAWNIGGGVGDWMTRKVATLFNAPAPSELVHSGMTYSYHWRWSSTFMRRPLGTKPLDIQVPFLFIYGG---NKVGNFHSKPWQTKMANIEGNQVIELPT-HHWVMVEQPDAFNEAVMDWL 260
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Match: A0A2R4C9I6_9BURK (Alpha/beta hydrolase n=3 Tax=Massilia TaxID=149698 RepID=A0A2R4C9I6_9BURK) HSP 1 Score: 169 bits (429), Expect = 9.240e-47 Identity = 91/267 (34.08%), Postives = 134/267 (50.19%), Query Frame = 2
Query: 143 IPTSPGFRMFEEGKTDGPPILFVHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSNGHDHDNVEAEKNGYSIDEIVRRLETTVEEAGKGSPVTIVAHDWGCTFSFLVEKRRPELVRRMVAIDVGGAVEPNFL------GLLVIISYHMWLIAAFRIGGVVGDTMARSFAWLVGAPSGARVAKARSCYPYYHWWKRRFDKNQEPIKDLMPDAPLLFLYGTAGYKRLLPFHADWWAKKVDEKKGSSAVAMTSSRHWVTADQPDDVN 925
+ T G + EG + IL +HGWPD +W+KQVE K +RC+ PGF + +H S+D ++ E V E PV ++ HDWGC F + R PE V R+V +D+G A +F LL I+ Y +WL AA+RIGG VG+ M+R + +G P+ YPYY W ++ + +K P P+LF+YGT ++ FH+ W ++ + GS AVAM + HW +PD+ N
Sbjct: 3 VKTINGTEVLIEG-SGSETILLLHGWPDSRALWEKQVEAFKPHFRCVRFTWPGFEPGAASAEH----------SLDALIGLCEAVVREVSPDQPVILLVHDWGCLFGYHFAMRHPERVSRVVGVDIGDAGSRDFKKATTIPALLGIVGYQLWLAAAWRIGGGVGENMSRWLSRQMGVPTPPEQITVAKNYPYYSTWTGKY----KAVKTFRPTCPMLFIYGT---RKPFMFHSPQWETWLNARPGSKAVAMDTD-HWPMLRRPDEFN 250
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Match: A0A411X7Z9_9BURK (Alpha/beta hydrolase n=2 Tax=Massilia albidiflava TaxID=321983 RepID=A0A411X7Z9_9BURK) HSP 1 Score: 167 bits (424), Expect = 2.510e-46 Identity = 88/245 (35.92%), Postives = 125/245 (51.02%), Query Frame = 2
Query: 209 VHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSNGHDHDNVEAEKNGYSIDEIVRRLETTVEEAGKGSPVTIVAHDWGCTFSFLVEKRRPELVRRMVAIDVGGAVEPNFL------GLLVIISYHMWLIAAFRIGGVVGDTMARSFAWLVGAPSGARVAKARSCYPYYHWWKRRFDKNQEPIKDLMPDAPLLFLYGTAGYKRLLPFHADWWAKKVDEKKGSSAVAMTSSRHWVTADQPDDVN 925
+HGWPD MW+ QV L +RC+ PGF A + YS+DE++ E V E PVT++ HDWGC F + +R P+LV R++ +D+G L G L I+SY +WL AA++IGG +G++M RSFA G P YPYY W ++ K+ +P + P P+LF+YGT ++ FH+ WA ++ K G VAM + HW QP N
Sbjct: 2 LHGWPDTAAMWEPQVAALSPYFRCVRFTWPGFETG----------AARKEYSLDELLGLCERVVRETSPDRPVTLLVHDWGCVFGYQFAQRHPDLVARVIGVDIGDGGSKAHLDEIGLKGKLGIVSYQLWLAAAWKIGGGIGESMTRSFAKKAGVPVAPEALTPEKNYPYYSTWTGKY-KSMKPFR---PACPMLFIYGT---RKPFMFHSTAWAAELKSKAGCQVVAMDTD-HWPMLRQPAQFN 228
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Match: A0A4P6L6Q4_9BURK (Alpha/beta hydrolase n=2 Tax=Massilia lutea TaxID=321985 RepID=A0A4P6L6Q4_9BURK) HSP 1 Score: 167 bits (424), Expect = 2.730e-46 Identity = 88/246 (35.77%), Postives = 125/246 (50.81%), Query Frame = 2
Query: 209 VHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSNGHDHDNVEAEKNGYSIDEIVRRLETTVEEAGKGSPVTIVAHDWGCTFSFLVEKRRPELVRRMVAIDVGGAVEPNFL------GLLVIISYHMWLIAAFRIGGVVGDTMARSFAWLVGAPSGARVAKARSCYPYYHWWKRRFDKNQEPIKDLMPDAPLLFLYGTAGYKRLLPFHADWWAKKVDEKKGSSAVAMTSSRHWVTADQPDDVNR 928
+HGWPD MW+ QV L +RC+ PGF + +H S+DE++ E V E PVT++ HDWGC F + +R PELV R++ +D+G L G L I++Y +WL AA++IGG +G++M RSFA P YPYY W ++ K +P + P P+LF+YGT ++ FH+ W ++ K GS VAM + HW QPD NR
Sbjct: 2 LHGWPDTAAMWEPQVAALSPYFRCVRFTWPGFETGAPRKEH----------SLDELIALCEQVVRETSPDRPVTLLVHDWGCLFGYQFAQRHPELVARIIGVDIGDGGSKAHLDEIGLKGKLGIVAYQLWLAAAWKIGGGIGESMTRSFAKKARVPVAPEALTPEKNYPYYSTWTGKY-KGAKPFR---PTCPVLFIYGT---RKPFMFHSSAWTAELQGKPGSKVVAMDTD-HWPMLRQPDAFNR 229 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1341.2781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1341.2781.1 >prot_H-canaliculatus_F_contig1341.2781.1 ID=prot_H-canaliculatus_F_contig1341.2781.1|Name=mRNA_H-canaliculatus_F_contig1341.2781.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=264bp MFEEGKTDGPPILFVHGWPDDHTMWDKQVEHLKDRYRCITTDLPGFGVDSback to top mRNA from alignment at H-canaliculatus_F_contig1341:9642..14317- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1341.2781.1 ID=mRNA_H-canaliculatus_F_contig1341.2781.1|Name=mRNA_H-canaliculatus_F_contig1341.2781.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4676bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1341:9642..14317- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1341:9642..14317- >mRNA_H-canaliculatus_F_contig1341.2781.1 ID=mRNA_H-canaliculatus_F_contig1341.2781.1|Name=mRNA_H-canaliculatus_F_contig1341.2781.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1584bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1341:9642..14317- (Hapterophycus canaliculatus Oshoro5f female)back to top |