prot_H-canaliculatus_F_contig134.2766.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig134.2766.1
Unique Nameprot_H-canaliculatus_F_contig134.2766.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length310
Homology
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BLAST of mRNA_H-canaliculatus_F_contig134.2766.1 vs. uniprot
Match: D8LGM9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM9_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.200e-93
Identity = 266/309 (86.08%), Postives = 280/309 (90.61%), Query Frame = 0 
Query:    1 MASNGIGDAGAGALARLLDDEPPSYRCLVASLDLRGNSIGSKGCKMLAESLHKNATMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGNTDMTEAGFTAVLAVLREGNNTLRELSIGSQLLRSREEVAACHVSRMLETPPCMLRSLDLSRCGMGDEGAYVLRGALLGHPTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDALAEGMECNASVESLLVWGNHFGQASLKRFGDLSEGRFALVGVFIDVQPFVVDGVFHAAERLK 309
            +ASN IGDAG G+LARLLDDEPPSY  +++SLDLRGNSIGSKGC++L E L +     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      TEAGFTAVLAVLREGNNT+RELSIGSQLLRSREEVAACHVSR LETPP MLR LDLS CG+GDEGAYVLRGAL GHPTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDALAEGMECNASVE L VWGNHFGQASLKRFG L  GRFALVGVF+DVQPFVVDGV+HAAE+ +
Sbjct:   68 VASNDIGDAGVGSLARLLDDEPPSYSSVLSSLDLRGNSIGSKGCQLLTERLRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEAGFTAVLAVLREGNNTVRELSIGSQLLRSREEVAACHVSRTLETPPYMLRLLDLSGCGIGDEGAYVLRGALTGHPTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDALAEGMECNASVERLFVWGNHFGQASLKRFGGLGGGRFALVGVFLDVQPFVVDGVYHAAEKFE 376
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig134.2766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGM9_ECTSI1.200e-9386.08Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 171..198
e-value: 0.5
score: 19.3
coord: 82..109
e-value: 1.1
score: 16.9
coord: 26..53
e-value: 0.65
score: 18.5
coord: 54..81
e-value: 0.11
score: 21.7
coord: 199..226
e-value: 0.64
score: 18.5
coord: 143..170
e-value: 3.7
score: 13.2
coord: 227..254
e-value: 0.7
score: 18.2
coord: 1..20
e-value: 75.0
score: 3.9
NoneNo IPR availablePANTHERPTHR24114FAMILY NOT NAMEDcoord: 146..266
coord: 2..161
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 29..276
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 2..15
e-value: 1.6
score: 9.0
coord: 171..193
e-value: 0.0019
score: 18.1
coord: 144..162
e-value: 4.0E-4
score: 20.2
coord: 31..48
e-value: 0.059
score: 13.4
coord: 226..249
e-value: 1.1E-6
score: 28.2
coord: 53..76
e-value: 1.4E-4
score: 21.7
coord: 200..220
e-value: 1.4
score: 9.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 132..287
e-value: 1.9E-32
score: 114.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..131
e-value: 2.6E-25
score: 90.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig134contigH-canaliculatus_F_contig134:23706..27911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig134.2766.1mRNA_H-canaliculatus_F_contig134.2766.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig134 23706..28210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig134.2766.1 ID=prot_H-canaliculatus_F_contig134.2766.1|Name=mRNA_H-canaliculatus_F_contig134.2766.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=310bp
MASNGIGDAGAGALARLLDDEPPSYRCLVASLDLRGNSIGSKGCKMLAES
LHKNATMTSLDLSSNPLKSEGASHIAKMLSNNFTLERLVVGNTDMTEAGF
TAVLAVLREGNNTLRELSIGSQLLRSREEVAACHVSRMLETPPCMLRSLD
LSRCGMGDEGAYVLRGALLGHPTMRTLDLSRNRIGITGGQALASLLVGDS
SLSTLCLQANLIGDEGARAFKIVLLHCQTLTKLDLRSNDIHDPGLDALAE
GMECNASVESLLVWGNHFGQASLKRFGDLSEGRFALVGVFIDVQPFVVDG
VFHAAERLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt