mRNA_H-canaliculatus_F_contig10262.276.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10262.276.1
Unique NamemRNA_H-canaliculatus_F_contig10262.276.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Match: D7FRP9_ECTSI (Alpha-type protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP9_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 1.820e-122
Identity = 180/253 (71.15%), Postives = 206/253 (81.42%), Query Frame = 1
Query:    4 TSINARVAKPLALENVEESEWNKTNQDTYWCDKLELEGTTLVVRERDLKIRIRERPFAVGGMRHCFRMWDHGAGGRSKRPANLVGKQSKFSVSVAQQLRDLKLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVAECDVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYILEKGDLDNEQRCWWMGAKVSSLFRTPKSRG---VCDVQGVDFSITDPCVHSKRKSYGAGDRGAQG 753
            +S + RV KPLALE+VEE+ WN TNQDTY+CDKL L+G+ L V+ERDL +RIRERPFAVGGMRHCFRMW+ GAGGRS++  NLVGKQSKFSVSVAQQ+R LK ELLCHR+ARQQA++FNSRV SFA   VA    YAAL  +P GL VAECDVYRLED  EPGGFRYLL EPFL+GKYLKYNGNNGYIL K  LD+EQRCWW  A+  S F   ++ G   VCDVQGVD +ITDPCVHS+ ++YGAGDRG QG
Sbjct:  210 SSYSTRVPKPLALEDVEEAVWNHTNQDTYYCDKLYLQGSALEVQERDLMVRIRERPFAVGGMRHCFRMWNLGAGGRSRKVNNLVGKQSKFSVSVAQQVRGLKQELLCHRLARQQATLFNSRVTSFAAGQVAKTPPYAALRSKPWGLQVAECDVYRLEDPCEPGGFRYLLVEPFLEGKYLKYNGNNGYILNKSGLDDEQRCWWTVAQAFSHFTHHQTGGEALVCDVQGVDNNITDPCVHSRSRTYGAGDRGTQG 462          
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Match: A0A7S1SG21_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SG21_ALECA)

HSP 1 Score: 97.4 bits (241), Expect = 1.750e-20
Identity = 77/266 (28.95%), Postives = 130/266 (48.87%), Query Frame = 1
Query:    1 MTSINARVAKPLALENVEESEWNKTNQDTYWC-DKLELEGTTLVVRERDLK-------IRIRERPFAVGGMRHCFRMWDHGAGGRSKRPANLVGKQSKFSV--SVAQQLRDLKLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVAECDVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYILEKGDLDNEQRCWWMGAKVSSL----FRTPKSRGVC-DVQGVDFSITDPCVHSKRKSYGAGDRGAQG 753
            +T + AR  +P +      +E  +   D  W    L  EG +    ++DL+       +R+ ++PFA G +R+ F ++  G  G  +   +LV K+SKF +  +  Q +    L+   HR A + A  FN       L+ V+   + A    +   +      V ++ D+S   GFRY+ AE ++ GKY+K+NGN+GY+ E  D++       +G  V++     F     + +C DVQGV    TDP +H++ KS+G  D G +G
Sbjct:    2 LTPLPARELEPESAWETASTEQLRNMADAQWAWIMLPSEGES---GKKDLQPQGNARMVRMHKKPFAQGALRYAFHLF-LGDPGSKEASLHLVAKESKFEMGSNTPQAVHTAFLDN--HRRAEELAKAFN---FDLVLNDVSVGGEDAEAKPQCPKIQFVPAYVIQISDQSASTGFRYVTAERYIPGKYVKFNGNDGYVDENVDIE-------IGGTVAAFSHFTFDHSDGQEICVDVQGVGCQWTDPQLHTRSKSFGPADLGEEG 251          
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Match: A0A7S2H228_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H228_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 4.680e-19
Identity = 67/211 (31.75%), Postives = 97/211 (45.97%), Query Frame = 1
Query:  133 RERDLKIRIRERPFAVGGMRHCFRMWDHGAGGRSKRPANLVGKQSKFSVSVAQQLRDLKLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVAEC---DVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYILEKGDLDNEQRCWWMGAKVSSLFRTPKSRG-VCDVQGVDFSITDPCVHSKRKSYGAGDRGAQG 753
            +E + ++++R +PFA GG R+ + M              +V K+S++ V  +++L   K  +   R    +AS    R + F                +P  L   E    DV+RL D S PGG+RYL  EP+LDG Y KYN N+GY+       +   C    A     F   K +  V D+QG  +  TDP +HS    YG GDR  QG
Sbjct:   22 KEPERRVKLRRQPFAQGGFRNVYVMIADNV--------KMVAKESRYEVPYSERL---KFHIDSSR-CMARASKLAQRYNLF----------------KPPHLPTVEYLKGDVWRLNDPSSPGGYRYLAVEPWLDGPYAKYNSNSGYVSPT----DSAACRIAQAFSHFTFHATKGKEMVVDLQGSGYRYTDPQLHSCSMDYGRGDRALQG 200          
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Match: A0A7S4RQY1_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RQY1_9DINO)

HSP 1 Score: 95.9 bits (237), Expect = 6.300e-19
Identity = 71/213 (33.33%), Postives = 99/213 (46.48%), Query Frame = 1
Query:  124 LVVRERDLKIRIRERPFAVGGMR--HCFRMWDHGAGGRSKRPANLVGKQSKFSVSVAQQLRDLKLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVAECDVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYILEKGDLDNEQR-CWWMGAKVSSLFRTPKSRGVCDVQGVDFSITDPCVHSKRKSYGAGDRGAQG 753
            LV  +    +R+  + FAVG MR  H F + D    G  K   +LV K+S+F      +LR  +  L  H  AR     FN+                   AR  +G    E  VYRL D   PGGFRYLLAE F+D  + K+NGN+G++         Q    W      +L R+  +  V D+QG     TDP  +S+++ +G+GD GA G
Sbjct:  344 LVASKGTRTVRLHSKAFAVGAMRAAHHFFIKD----GDEK---HLVAKESRFKERYVDRLRVAQAFLEQHEEARACLEAFNA-------------------ARGSAGPRFVEAFVYRLSDPGAPGGFRYLLAEEFIDAAFAKFNGNDGFVNPAAQASVAQAFSHW------TLHRSCGASVVVDIQGAPELWTDPQTNSQQRCFGSGDLGADG 524          
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Match: A0A8J1W793_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1W793_9DINO)

HSP 1 Score: 90.9 bits (224), Expect = 3.430e-17
Identity = 65/205 (31.71%), Postives = 98/205 (47.80%), Query Frame = 1
Query:  157 IRERPFAVGGMRHCFRMWDHGAGGRSKRPANLVGKQSKFSVSVAQQLRDLKLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVAECDVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYILEKGDLDNEQRCWWMGAKVSSLF------RTPKSRGVCDVQGVDFSITDPCVHSKRKSYGAGDRGAQG 753
            +R+ PFA GG+R+ ++M      G +    ++V K+S+     A++LR       C   A   ++ F   + + A+   A+      L    S        VYRL+D    GGFRYL AEP L+G Y KYNGNNG++ +  ++ +        A+++  F       T  +  V D+QG     TDP +HS    YG  DR AQG
Sbjct:  374 LRDNPFAQGGIRNVYKMRVVQPNGGA---IHMVAKESRHEGEYAERLRFHAETSKCQGRAIVLSTDFKKALRTAAMFGGASAQLLQELQIH-SNFQFVPMHVYRLKDSKVKGGFRYLAAEPELEGDYRKYNGNNGWVCQ--EVKDRGDAAGFAARLAQAFSHWTSVHTNGTEMVVDIQGTHEGFTDPQLHSLDGKYGRADRKAQG 572          
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Match: A0A812S738_9DINO (Ak1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812S738_9DINO)

HSP 1 Score: 82.0 bits (201), Expect = 3.650e-14
Identity = 67/233 (28.76%), Postives = 109/233 (46.78%), Query Frame = 1
Query:   91 WCDKLELEGTTLVVRERDLKIRIRERPFAVGGMRHCFRMWDHGAGGRSKRPAN-----LVGKQSKFSVSVAQQLRDL-KLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVAECDVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYILEKGDLDNEQRCWWMGAKVSSLF-----RTPKSRGVC-DVQGVDFSITDPCVHSKRKSYGAGDRGAQG 753
            W   +  EG  L+ R     + +  +PFA G +R+ +      A G S+   +     LV K+SKFS+   +  +DL K  L  H  A++ A  FN+ + +             A     S +      V ++ DE++  GFRY+ AE ++ G Y+K NGN+G++    D +         AKV++ F     +    + +C D+QGV  + TDP +HS +K +G  D G  G
Sbjct:  258 WAWLMVEEGGELLARGEARLVYLHHKPFAQGALRYAYHA--RSAHGYSEDLVHGSRFHLVVKESKFSIK-HRSPKDLHKFFLQNHHRAQEFAKEFNAAIDT-------------AGGEEASKVKFVPAYVLKITDEAQTSGFRYVTAERYISGTYVKLNGNDGFVESFQDGE--------AAKVAAAFSHFTFQQSGGQELCVDIQGVGTTWTDPQIHSLQKQFGIADLGKGG 466          
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Match: A0A1Q9CFD7_SYMMI (Alpha-protein kinase 1 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CFD7_SYMMI)

HSP 1 Score: 76.3 bits (186), Expect = 2.300e-12
Identity = 60/210 (28.57%), Postives = 96/210 (45.71%), Query Frame = 1
Query:  151 IRIRERPFAVGGMRHCFRM----W---DHGAGGRSKRPANLVGKQSKFSVSVAQQLRDL-KLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVAECDVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYILEKGDLDNEQRCWWMGAKVSSLFRTPKSRGVC-DVQGVDFSITDPCVHSKRKSYGAGDRGAQG 753
            + +  +PFA G +R+ +      W   D  +G R     +LV K+SKF      +  D+ K  L  HR A++ A  FN+ +     S               S +      V ++ DE++  G RY+ AE ++ G Y+K NGN+G++    D  + Q      A     F     + +C D+QGV  + TDP +HS +K +G  D G +G
Sbjct:   81 VYLHHQPFAQGALRYAYHARSAHWYSEDAASGSRF----HLVVKESKFVAK--HRAEDVHKFFLQNHRRAQEFAKAFNAAIDKVRESEC-------------SKVRFVPAYVLKISDEAQEAGCRYVTAERYISGNYVKLNGNDGFV----DSQSGQAAEVAAAFSHFTFHDSGGQELCVDIQGVGTTWTDPQIHSLQKQFGIADLGRRG 267          
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Match: A0A812RQ90_9DINO (Ak1 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812RQ90_9DINO)

HSP 1 Score: 74.7 bits (182), Expect = 1.120e-11
Identity = 57/206 (27.67%), Postives = 93/206 (45.15%), Query Frame = 1
Query:  151 IRIRERPFAVGGMRHCFRMWDHGAGGRSKRPAN---LVGKQSKFSVSVAQQLRDL-KLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVAECDVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYILEKGDLDNEQRCWWMGAKVSSLFRTPKSRGVC-DVQGVDFSITDPCVHSKRKSYGAGDRGAQG 753
            + +  +PFA G +R+ +             P +   LV K+SKF      +  D+ K  L  HR A++ A  FN+ +     S               S +      V ++ DE++  G RY+ AE ++ G Y+K NGN+G++    D  + Q      A     F+    + +C D+QGV  + TDP +HS +K +G  D G +G
Sbjct:  274 VYLHHQPFAQGALRYAYHARSAHWYSEDAVPGSRFHLVVKESKFVAK--HRAEDVHKFFLQNHRRAQEFAKAFNAAIDKVRESEC-------------SKVRFVPAYVLKISDEAQEAGCRYVTAERYISGNYVKLNGNDGFV----DSQSGQAAEVAAAFSHFTFQDSGGQELCVDIQGVGTTWTDPQIHSLQKQFGIADLGRRG 460          
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Match: A0A1W2TFL1_ROSNE (Uncharacterized protein n=1 Tax=Rosellinia necatrix TaxID=77044 RepID=A0A1W2TFL1_ROSNE)

HSP 1 Score: 73.2 bits (178), Expect = 4.240e-11
Identity = 72/219 (32.88%), Postives = 98/219 (44.75%), Query Frame = 1
Query:   73 TNQDTYWCDKLELEGTTLVVRERDLKIRIRERPFAVGGMRHCFRMWDHGAGGRSKRPAN-LVGKQSKFSV-SVAQQLRDLKLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVAECDVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYILEKGDLDNEQRCWW-MGAKVSSLFRTPKSRG---VCDVQGVDFSITDPCVHS 711
            T  D   CD    E   L V E  L I  R RPFA G +R         +  R+   AN  V K SK  V  +A  + D++ + LC   A +    FNS +    +  V   V  + L  +  G                PG   YLL EPF++GKY+KYNGNNGY+      DNE   ++   A+  S F   +S G   + D+QGVD  +TDP + +
Sbjct:  530 TLNDMMACD----ENIKLSVAE--LTIHARSRPFAQGAIRVA-------SYARTAVSANPFVIKSSKGGVRGLAHVVEDMRCQALCKAFALE----FNSLLKGQGIIDV---VVTSCLLNKADG----------------PGQKDYLLLEPFIEGKYVKYNGNNGYVAP----DNEGTLFFNQAAQAFSHFTFERSWGSFLISDLQGVDNILTDPAIQT 708          
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Match: A0A8J2AZL9_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2AZL9_9DINO)

HSP 1 Score: 70.1 bits (170), Expect = 4.470e-10
Identity = 67/273 (24.54%), Postives = 100/273 (36.63%), Query Frame = 1
Query:  151 IRIRERPFAVGGMRHCFRMWD--------HGAGGRSKRPANLVGKQSKFSVSVAQQLRDLKLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVAECDVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYI--LEKGDLDNEQRCWWMGA-----------------KVSSLFRTPKSRG---------------------------------------------VCDVQGVDFSITDPCVHSKRKSYGAGDRGAQG 753
            + + ++PFA GG+R+ +RM +         G          LV K+S++ V  A++L               ++S    R  SFA     N +D          LH    DVYR+ +++    FRYL  E  L GKY K+NGNNG++    K    N    +  G                  + + + RTP S                                               V D+QG ++S TDP ++S  K YG  DRG +G
Sbjct:  465 VSLPQQPFAQGGLRNVYRMTEILENHSSSFGKSSSGTTIKKLVAKESRYEVPYAERL-----------AFHLESSKCQERAISFAAQW--NALDVVQRDSLLPHLHFLRTDVYRIREDASTQKFRYLAVEEELQGKYRKFNGNNGWVRPTTKNSSKNVTDAFGGGVIRSDHDKIGTKPFEELLQEAKVARTPASFSSKKRLNISHQPDSSRQMNLLCEDLQSSIAQAFSHWTYHVSHCKEIVVDIQGAEWSFTDPQLNSVPKEYGRADRGQRG 724          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10262.276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRP9_ECTSI1.820e-12271.15Alpha-type protein kinase domain-containing protei... [more]
A0A7S1SG21_ALECA1.750e-2028.95Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S2H228_9STRA4.680e-1931.75Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4RQY1_9DINO6.300e-1933.33Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A8J1W793_9DINO3.430e-1731.71Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A812S738_9DINO3.650e-1428.76Ak1 protein n=1 Tax=Symbiodinium natans TaxID=8784... [more]
A0A1Q9CFD7_SYMMI2.300e-1228.57Alpha-protein kinase 1 n=1 Tax=Symbiodinium microa... [more]
A0A812RQ90_9DINO1.120e-1127.67Ak1 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=... [more]
A0A1W2TFL1_ROSNE4.240e-1132.88Uncharacterized protein n=1 Tax=Rosellinia necatri... [more]
A0A8J2AZL9_9DINO4.470e-1024.54Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10262contigH-canaliculatus_F_contig10262:137..4546 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score366.7
Seed ortholog evalue8.7e-99
Seed eggNOG ortholog2880.D7FRP9
KEGG koko:K08292
KEGG Pathwayko04152,ko04921,map04152,map04921
GOsGO:0000166,GO:0000278,GO:0000281,GO:0000331,GO:0000910,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005516,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006970,GO:0006971,GO:0006996,GO:0007010,GO:0007033,GO:0007049,GO:0008144,GO:0008150,GO:0008152,GO:0009628,GO:0009653,GO:0009987,GO:0016043,GO:0016050,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018107,GO:0018193,GO:0018209,GO:0018210,GO:0019538,GO:0022402,GO:0030029,GO:0030036,GO:0030554,GO:0030587,GO:0031033,GO:0031038,GO:0031156,GO:0031288,GO:0031410,GO:0031982,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0033298,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043933,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045055,GO:0046903,GO:0048471,GO:0048856,GO:0050789,GO:0050793,GO:0050896,GO:0051179,GO:0051234,GO:0051301,GO:0051703,GO:0051704,GO:0061640,GO:0065007,GO:0070177,GO:0071704,GO:0071840,GO:0090702,GO:0097159,GO:0097367,GO:0097708,GO:0099120,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1903047
EggNOG free text desc.elongation factor-2 kinase activity
EggNOG OGs28NQ8@1,2QVA3@2759
EC2.7.11.20
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionvon Willebrand factor, type A
Ec32 orthologEc-00_003380.1
Exons6
Model size753
Cds size753
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10262.276.1prot_H-canaliculatus_F_contig10262.276.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10262 137..4546 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928659.4321144-CDS-H-canaliculatus_F_contig10262:136..2321622928659.4321144-CDS-H-canaliculatus_F_contig10262:136..232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 137..232 -
1696845516.3628223-CDS-H-canaliculatus_F_contig10262:136..2321696845516.3628223-CDS-H-canaliculatus_F_contig10262:136..232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 137..232 -
1622928659.4491632-CDS-H-canaliculatus_F_contig10262:848..9621622928659.4491632-CDS-H-canaliculatus_F_contig10262:848..962Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 849..962 -
1696845516.375382-CDS-H-canaliculatus_F_contig10262:848..9621696845516.375382-CDS-H-canaliculatus_F_contig10262:848..962Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 849..962 -
1622928659.465526-CDS-H-canaliculatus_F_contig10262:1198..12971622928659.465526-CDS-H-canaliculatus_F_contig10262:1198..1297Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 1199..1297 -
1696845516.384659-CDS-H-canaliculatus_F_contig10262:1198..12971696845516.384659-CDS-H-canaliculatus_F_contig10262:1198..1297Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 1199..1297 -
1622928659.4784904-CDS-H-canaliculatus_F_contig10262:2139..23141622928659.4784904-CDS-H-canaliculatus_F_contig10262:2139..2314Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 2140..2314 -
1696845516.3948066-CDS-H-canaliculatus_F_contig10262:2139..23141696845516.3948066-CDS-H-canaliculatus_F_contig10262:2139..2314Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 2140..2314 -
1622928659.493117-CDS-H-canaliculatus_F_contig10262:2965..31201622928659.493117-CDS-H-canaliculatus_F_contig10262:2965..3120Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 2966..3120 -
1696845516.4038658-CDS-H-canaliculatus_F_contig10262:2965..31201696845516.4038658-CDS-H-canaliculatus_F_contig10262:2965..3120Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 2966..3120 -
1622928659.509046-CDS-H-canaliculatus_F_contig10262:4432..45461622928659.509046-CDS-H-canaliculatus_F_contig10262:4432..4546Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 4433..4546 -
1696845516.4133177-CDS-H-canaliculatus_F_contig10262:4432..45461696845516.4133177-CDS-H-canaliculatus_F_contig10262:4432..4546Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10262 4433..4546 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10262.276.1

>prot_H-canaliculatus_F_contig10262.276.1 ID=prot_H-canaliculatus_F_contig10262.276.1|Name=mRNA_H-canaliculatus_F_contig10262.276.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=251bp
MTSINARVAKPLALENVEESEWNKTNQDTYWCDKLELEGTTLVVRERDLK
IRIRERPFAVGGMRHCFRMWDHGAGGRSKRPANLVGKQSKFSVSVAQQLR
DLKLELLCHRVARQQASVFNSRVHSFALSSVANNVDYAALARRPSGLHVA
ECDVYRLEDESEPGGFRYLLAEPFLDGKYLKYNGNNGYILEKGDLDNEQR
CWWMGAKVSSLFRTPKSRGVCDVQGVDFSITDPCVHSKRKSYGAGDRGAQ
G
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mRNA from alignment at H-canaliculatus_F_contig10262:137..4546-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10262.276.1 ID=mRNA_H-canaliculatus_F_contig10262.276.1|Name=mRNA_H-canaliculatus_F_contig10262.276.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4410bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10262:137..4546- (Hapterophycus canaliculatus Oshoro5f female)
ATGACATCGATTAATGCCAGGGTCGCCAAACCTCTCGCACTAGAGAACGT CGAAGAATCGGAGTGGAACAAGACCAACCAGGACACGTATTGGTGCGACA AGCTGGAGCTGGAGGTGAGGTGGACGGCGAGACAACAGCAGGGCTGTCGA GAAAGCGGCGGTGGTCAAAGATCACGTGAAAAAACGAGCCGACTGTAAAC CCAAGAGGGGTGTAGGTTGCCGTGATTTCCCTCGCGCGAGGGCTTCACGA CCGTGATCCCTCGGGCGAAGGGTGTTTCTACTGGAGTTTGTACCTCCTTT TTTTGCCTTTTTCGCCGGAAAAGGGGAGGTGTGGCCACCCGCACCCATGG AGACGATATCTCCAGGTAAAAGTTCGTCTAATCTCCCGAGACAACCGTTT CTTCCCTGGGCGCGAAGACTCTCGGATCCCGAGATGATCTCGTTCGGCGA TGAAGGAAGGTGCCAACGTGCCGCCTACTAAGGTGTATTCTGGAGAGGTG AAATCGTGGACGAATCCCTAGGGCCATGGTTTGAGTCTTTCGGGTCCTCT TGGTTTTCTGCACGGCACCCGGGAGGGTAGGCCTCTCGAACGGGGCTTTC CGTCTCGGGACGGGTTGCGATCGTCGGTAGGGGAGATGGTTCTCACGGAG AAGAAGGAAAGGAAGGAAAAGAAGGAAAAGAAGGAAAGGAAGGTTCTTTC GAAGACGGGTTGGTTTGGTTTGGTCTCTACTGTCTGGTCTTCTGCTCCTC ATGGCGCCGTCGAGATGCACGGCCTGGTAGGTGTGCGTCGAGCTCAGCAA AAAAGTGGGGCCCGAGGGAATTTGTTGGATGCCGGCACATTTTGCTATGG CTCACGACGGGAGCCTCCTGCGCCACCAAGCGGCAGGGGCTAACTCAGAG CAGCTGATGCCTTGGCGAAACGCGAGCTAGTCAAAACAGCAAGAGCTCTC CATGCTGCGTTATGTCTCGAGTCTCGCCCGGGGTCGGCGCACTCGTGATG GACGTAAGCGGCGGGAAGACATCCACGGCCGCGCAGCCGACCTGCTCCCT TCGCACGCAACCGGGCCACTCCTCGACCGCTCGACCGATCGCCGATTGTT TACCGGAGCTGCCCTCGCTGCCCATCGCACCCAAGGAGACCCACTATCGC GCCACCAATGTTTCGGCCGTGCATGCTCGGGTAGATAAGAGCAGACAGGG GAGGCGGCCCGACGCAGGCCAGACAGGCCGAAGAGCGACGACCCTCTAGC GGGGCTCGTTTCGCATGCCGCCGTGCCCCACGGATTTTCCCCGGCCCCCT TCACTCACACCGCCACCACAAAGCACCGTCGCCCGAAACCAGCGGCCCCC TACATTCTTGGAAGAAAGACGAAAAAAAAATCAATACGACTCCCCCCTGC GTCAATCACCGTCGCCTCGCGTGAAGGGTACGACGCTGGTCGTGCGGGAG CGGGACCTCAAGATTCGGATCCGCGAGCGGCCGTTCGCCGTCGGGGGCAT GCGGCACTGCTTTCGGATGTGGGACCACGGGGCCGGCGGCCGCTCCAAGA GGCCCGCCAATCTCGTGGGCAAGCAGAGCAAGTGAGTGCGCGCCCCTGCT GAGCGTGCTTCGCCTCGTGGCGTGCGCCTTTTGGTCGGTGTTGCCGCTGG CGGTGTGCGTGTGCGTGTTGGTGTTGTGTATGCTGTTCAGGTTCAATTAG TCTCGGAGGGGAGCCGTGGGGGGGGGAGGGGGGGGGGCACAGCAGCATTT AAAGTTTTGTGGGGAGTAAAAGGGTTCATAGCGATTGGTCTTCCCACCCC GGAAGAGAGAGAATGTCCCGATGTCTTCAAAAAGGAGTCCCCGAGAATAC TCCGATGTCTCTAAAGCGGAATTCCCGTGGGCTTCCTCAGAGCAAGGCGA GCTCGAGGTTTTCTGTAACGCCGGTCGTCTGTGGGGGGGCGGGCATCAAA GTGGCACGAACGGAATGAGACCCAGACCCAACACCCCGGTCGATTTTGAG TGCTGACCTGTTGGGGGTCAAAGCGCGGGTGTATAGAAGCCATGAAGAGG CGTTACTTCCTTCGGAGTGGCGGCGTCGATGAAACATCCCCACGGTGACA ACGCGGCCAACCTCCAGCACCCCCACCGAAAAGGGGGGGCCTAGTCTGCG GCAATCGCCACGGCAAGCGCCACCACCGGCCGCAGGAACTGCAAAGAGCC CGAACTCCCTGCAACACACGCCGTCTCCACAGGTTCTCCGTGAGCGTGGC CCAGCAGTTGAGGGACCTGAAGCTGGAGCTGCTCTGCCACCGGGTGGCTC GCCAGCAGGCCTCGGTGTTCAACTCCCGCGTCCACTCGTTCGCCTTGAGC TCCGTCGCGAACAACGTCGACTACGCCGCGCTTGCAAGAAGGCCGTCTGG GCTGCACGTGAGTAGATAAAACAAAGCAAAACTCTCAACAGAAACCTCGA GGTATTGTCTCGCGCGACGTGTCTCCGGAGGTGTTCCTGCGGTGTTGTTA TGTCCTCGTGTAAAACGTATTTCTAAGCCGAGACTGCATGAAAATCAACA CAGGTCTCGTGAGACGCCTCCGGAGACTTGACTAAGAGGGTGTTCCTTCG GTGTTGCTGACTACTGAATGTCAAAACGATGTGTACTTGTACTTTGACCC TACCCCTTGTGATGCGTTGTTTGTGGGGTGTCTCCGTGCTGCGACTTGCG TCGTCGTTGTTACCGTTGTTCGTACCGGGTGACCAAATTCCACCTGGATG GTTTCCAGGCCGACGAGTCTTGATGCGGCAATGGACCTGGTTATGCGTGA TGCCCATGCCCATCACGATGATAAATATCAATACTCCGCGAAGTCTGGGC TACGCCTGCGTGGGTGACGATGGCCGTAGTGGGCGAATGCCGCTTGCATC TTCGAGTGAACTTACCGACAAACGAGTCATCGGACGTTCCTCGGCAGAGT ATTAAGAGTGGACTTGTCTCGGAGATCGTGGGAAGAGACACCTTCGGCAA CGTTGATGTTGGCGAGGATGATGACGGTATCGAAGCTGGGGTTGTTGATG GTGGTTTTTATATTTTCATGTCCGTAGACGATGTTAAAATTTTGGTGTCG GCGGTGTTACTGGTTGTGAATGGTTATGGTAAACGCTACACGACGATGGC GAGAGAGCACCTCAATTCGACCGTCGCTGGTACGTTCGTCGTGGTGCTGT GTCAACCTCGCTTTGGTCGTCTTTCGTCTGTCCCACGACGAATGCTCAGG TGGCTGAGTGCGACGTGTATCGCTTGGAAGACGAGTCCGAGCCAGGCGGC TTCAGGTACCTCTTGGCGGAGCCCTTCCTCGACGGAAAGTACCTCAAGGT GTGCAACGCAAGAGGAGGCCGGGAGAAATGAGATAGACAGAGACGGAGAC GGAAACGGAGACGGAGACGGAGACGGAGAGACAGAGAGAGAAGCCGGTCT CTCTCAAATCGGTCAAGTATTTTGCCCCCTTTCATCGCGCAATCCCCCAA CCACCCACCCCGGTCCGTTCTTTCTGTGACCACGCGATTTCCTCTCGCGT TTCATGTACGCGTGTGCGTCTGTACCTCCTCCAGTACAACGGCAATAACG GGTACATCCTCGAGAAGGGTGATCTGGACAACGAGCAGCGGTGCTGGTGG ATGGGGGCGAAGGTTTCCTCACTCTTCAGGACCCCCAAAAGCAGGGGAGT TTCCCGGGGGGGTGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGACCGGGGTGAACGGTGGTTCCGTCGACAGAGG CTCGCCCTGTCCCTCAAGTTCCGCCATTCCCACATGCCGGTCGAATTGAT CGCAGGCCGGTTGGGCGCGTTGCTGTCGTTGTCGTCGCTGTTGCTTTCTC CCCGCAGGCCGTCCAGGTCTTTTAGTCCTCGTAGATATATGTATGTATCG TTGTGGTCCAACTGCCTCCGCCGAGGAGGAGATGCCTACACCAGAGTCCT TGAACAATCTCCTTTAGGTTCGCTACGCGAGCCAGCGGAAAAATTACTTC CCTACATGGCACGGAGTCAGAAGCTACCGCAATATCCAGCGCCACGTCGA GCTACCACGCAAAACTTCCACGTCGAGCCGGGCGGACGGAATGTCATCGT GTGTCGCTCGCTGAGACATCGACAAGAGCATGGGATGCCCGGACCGATGG GGTCGCACGCTCCTCTCGGCCGAAGTTTCCAACGGCTCCCCAACTCTGCC CTTCTTCGTCTCTCGTCCCCGCCCGTTTTCGTATTTTGTTTTTTTGTCCA TTCCCCGTGAAAAGGTGTGCGATGTGCAGGGGGTAGACTTCTCGATCACC GACCCGTGCGTCCACAGCAAACGCAAATCGTACGGCGCCGGCGACAGGGG GGCGCAAGGT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10262:137..4546-

>mRNA_H-canaliculatus_F_contig10262.276.1 ID=mRNA_H-canaliculatus_F_contig10262.276.1|Name=mRNA_H-canaliculatus_F_contig10262.276.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1506bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10262:137..4546- (Hapterophycus canaliculatus Oshoro5f female)
ATGACATCGATTAATGCCAGGGTCGCCAAACCTCTCGCACTAGAGAACGT
CGAAGAATCGGAGTGGAACAAGACCAACCAGGACACGTATTGGTGCGACA
AGCTGGAGCTGGAGATGACATCGATTAATGCCAGGGTCGCCAAACCTCTC
GCACTAGAGAACGTCGAAGAATCGGAGTGGAACAAGACCAACCAGGACAC
GTATTGGTGCGACAAGCTGGAGCTGGAGGGTACGACGCTGGTCGTGCGGG
AGCGGGACCTCAAGATTCGGATCCGCGAGCGGCCGTTCGCCGTCGGGGGC
ATGCGGCACTGCTTTCGGATGTGGGACCACGGGGCCGGCGGCCGCTCCAA
GAGGCCCGCCAATCTCGTGGGCAAGCAGAGCAAGGTACGACGCTGGTCGT
GCGGGAGCGGGACCTCAAGATTCGGATCCGCGAGCGGCCGTTCGCCGTCG
GGGGCATGCGGCACTGCTTTCGGATGTGGGACCACGGGGCCGGCGGCCGC
TCCAAGAGGCCCGCCAATCTCGTGGGCAAGCAGAGCAAGTTCTCCGTGAG
CGTGGCCCAGCAGTTGAGGGACCTGAAGCTGGAGCTGCTCTGCCACCGGG
TGGCTCGCCAGCAGGCCTCGGTGTTCAACTCCCGCGTCCACTCGTTCGCC
TTGAGCTCCGTCGCGAACAACGTCGACTACGCCGCGCTTGCAAGAAGGCC
GTCTGGGCTGCACGTTCTCCGTGAGCGTGGCCCAGCAGTTGAGGGACCTG
AAGCTGGAGCTGCTCTGCCACCGGGTGGCTCGCCAGCAGGCCTCGGTGTT
CAACTCCCGCGTCCACTCGTTCGCCTTGAGCTCCGTCGCGAACAACGTCG
ACTACGCCGCGCTTGCAAGAAGGCCGTCTGGGCTGCACGTGGCTGAGTGC
GACGTGTATCGCTTGGAAGACGAGTCCGAGCCAGGCGGCTTCAGGTACCT
CTTGGCGGAGCCCTTCCTCGACGGAAAGTACCTCAAGGTGGCTGAGTGCG
ACGTGTATCGCTTGGAAGACGAGTCCGAGCCAGGCGGCTTCAGGTACCTC
TTGGCGGAGCCCTTCCTCGACGGAAAGTACCTCAAGTACAACGGCAATAA
CGGGTACATCCTCGAGAAGGGTGATCTGGACAACGAGCAGCGGTGCTGGT
GGATGGGGGCGAAGGTTTCCTCACTCTTCAGGACCCCCAAAAGCAGGGGA
TACAACGGCAATAACGGGTACATCCTCGAGAAGGGTGATCTGGACAACGA
GCAGCGGTGCTGGTGGATGGGGGCGAAGGTTTCCTCACTCTTCAGGACCC
CCAAAAGCAGGGGAGTGTGCGATGTGCAGGGGGTAGACTTCTCGATCACC
GACCCGTGCGTCCACAGCAAACGCAAATCGTACGGCGCCGGCGACAGGGG
GGCGCAAGGTGTGTGCGATGTGCAGGGGGTAGACTTCTCGATCACCGACC
CGTGCGTCCACAGCAAACGCAAATCGTACGGCGCCGGCGACAGGGGGGCG
CAAGGT
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