mRNA_H-canaliculatus_F_contig1334.2727.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1334.2727.1
Unique NamemRNA_H-canaliculatus_F_contig1334.2727.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Match: D8LNM3_ECTSI (Phosphoribosylaminoimidazole carboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNM3_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 1.010e-137
Identity = 241/326 (73.93%), Postives = 257/326 (78.83%), Query Frame = 2
Query:  110 RTLSSTEG---AAGDLSSLLARVAAGDLSPEAAASQLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVIFGDGKSAEQMTHIFIAMIRDAEQEGSTKAADT-----------------DEGGGSHRPIVATRVSPEKWAVLSEGLPGQLVYHAAARIVSFGAPPT---LAATGREAGDSSVKRSIGKVAVLSAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLESSRAAAVDPE 1018
            R+LSST     AAGDL +LLARVAAGDLSP  AASQL+PLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEV+FGDGKSAEQ+T I  AMIR+A + GS  AA+                          P+VATRVSPEKW V+S+ LPGQL YHA ARIVSFG PP     A  G   G  +   SIG VAVLSAGTSDLA+AEEAAVLAELAGAEV+RFHDVGVAGIHRLL AIPSVQK GVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLL+SS+ A    E
Sbjct:    5 RSLSSTATGGEAAGDLPALLARVAAGDLSPATAASQLAPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVVFGDGKSAEQITDILAAMIREA-RAGSRVAAEAAAVHXXXXXXXXXXXXXXXXXXXXSPVVATRVSPEKWLVISDALPGQLTYHADARIVSFGEPPQRRRAAGDGAPGGSIATSISIGTVAVLSAGTSDLAVAEEAAVLAELAGAEVSRFHDVGVAGIHRLLGAIPSVQKAGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLKSSKVATATRE 329          
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Match: A0A835ZD94_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD94_9STRA)

HSP 1 Score: 248 bits (634), Expect = 9.130e-75
Identity = 150/288 (52.08%), Postives = 177/288 (61.46%), Query Frame = 2
Query:  182 LSPEAAASQLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVIFGDGKSAEQMTHIFIAMIRDAEQEGSTKAADT---------DEGGGSHRPIVATRVSPEKWAVLSEGLPGQLVYHAAARIVSFGAPPTLAATGREAGDSSVKRSIGKVAVLSAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLESSRAAAVDPE 1018
            + P AA  QL PLL         +G FAKIDH R  R GFPEV++G+GK+ EQ+ HI   MIR  +                     G   H P VA+R+   KW+ L   + G   Y  A   V  G+ P  A             S+G VAV+ AGTSD+AIAEE AVL EL GA V R +DVGVAGIHRL +A+P V+    A+C+AGMDGAMP VVAGLV+CPVVAVPTSVGYGAA  G+APLLTMLNACAPGV+VVNIDNGFGAAA AVK+L    AA  + E
Sbjct:    1 MGPAAAVEQLEPLLT-----IAHIGDFAKIDHHRTIRTGFPEVVYGEGKTPEQIRHIMEVMIRHRKSHSXXXXXXXXXXXXXXXXSSGSVDHAPAVASRICSAKWSHLQH-IDGLQYYRDARLAVYHGSAPPAAG------------SLGTVAVMCAGTSDVAIAEETAVLLELCGAAVERVYDVGVAGIHRLFAALPRVRAAHCAVCIAGMDGAMPSVVAGLVRCPVVAVPTSVGYGAAFGGVAPLLTMLNACAPGVAVVNIDNGFGAAAMAVKILRMRHAAPPEEE 270          
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Match: A0A8K2A2M8_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=1 Tax=Petrachloros mirabilis ULC683 TaxID=2781853 RepID=A0A8K2A2M8_9CYAN)

HSP 1 Score: 224 bits (570), Expect = 2.190e-65
Identity = 142/286 (49.65%), Postives = 177/286 (61.89%), Query Frame = 2
Query:  155 LLARVAAGDLSPEAAASQLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVIFGDGKSAEQMTHIFIAMIRDAEQEGSTKAADTDEGGGSHRP-IVATRVSPEKWAVLSEGLPGQLVYHAAARIVSFGAPPTLAATGREAGDSSVKRSIGKVAVLSAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLESSRAAAV 1009
            LL  VAAG++SP+AA  QL  L        E VG FA++DH R  R GFPEVI+G GK+ EQ+  IF AM                     H P ++ATR+    + VL + LP  L Y A ARI +   PP               R +G++ +LSAGT+DL++AEEAAV AEL G  V RF DVGVAGIHRLL    ++ +  V I VAGM+GA+  VVAGLV  PVVAVPTS+GYGA+ +GLAPLLTMLNACAPG+ VVNIDNGFGAA  A ++L ++   +V
Sbjct:   10 LLRAVAAGEISPDAALDQLKHLSY------EPVGEFARLDHHRTLRTGFPEVIWGPGKTPEQIVQIFTAMQ-------------------CHHPWVMATRIEVSVYEVLRQSLPA-LQYFATARICATSTPPE-------------PRHLGRIGLLSAGTADLSVAEEAAVTAELCGFAVERFWDVGVAGIHRLLDNRAAIARADVIIVVAGMEGALASVVAGLVDVPVVAVPTSIGYGASFNGLAPLLTMLNACAPGIGVVNIDNGFGAAILAGQILRTATRVSV 256          
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Match: UPI0016878F7A (Nickel pincer cofactor biosynthesis protein LarB n=13 Tax=Coleofasciculus TaxID=669368 RepID=UPI0016878F7A)

HSP 1 Score: 223 bits (567), Expect = 5.020e-65
Identity = 147/284 (51.76%), Postives = 178/284 (62.68%), Query Frame = 2
Query:  146 LSSLLARVAAGDLSPEAAASQLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVIFGDGKSAEQMTHIFIAMIRDAEQEGSTKAADTDEGGGSHRPIV-ATRVSPEKWAVLSEGLPGQLVYHAAARIVSFGAPPTLAATGREAGDSSVKRSIGKVAVLSAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLESS 994
            L SLLA VAAGD+SPEAA  +L           E VG FAKIDH R  R GFPEVI+G GK+ EQ+  I  AM                    S  P+V ATR+ P  +A L E + G L Y+A+ARI +  +P TL             +  G +A+L AGT+DL++AEEAAV AEL G +V R  DVGVAGIHRLLS    ++   V I VAGM+GA+P VVAGL  CPV+AVPTSVGYGA+  GLAPLLTMLN+CA GV VVNIDNGFGAA  A ++L ++
Sbjct:    7 LQSLLAAVAAGDVSPEAALEKLKHFAF------EPVGDFAKIDHHRTLRTGFPEVIWGPGKTPEQIAGIMEAMR-------------------SRNPVVMATRIEPAVYAQLQEKVAG-LQYYASARICAI-SPATLE-----------PQYSGTIAILCAGTADLSVAEEAAVTAELCGFQVQRLWDVGVAGIHRLLSNRHVIESANVLIVVAGMEGALPSVVAGLADCPVIAVPTSVGYGASFGGLAPLLTMLNSCAAGVGVVNIDNGFGAAILAGQILRTA 252          
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Match: A0A5D6Y0G0_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0G0_9STRA)

HSP 1 Score: 234 bits (597), Expect = 2.010e-64
Identity = 157/327 (48.01%), Postives = 197/327 (60.24%), Query Frame = 2
Query:   26 MPSLCRVLRLSRPCFFAGRVQQSLSLRRRTLSSTEGAAGDLSSLLARVAAGDLSPEAAASQLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVIFGDGKSAEQMTHIFIAMIRDAEQEGSTKAADTDEGGGSHRPIVATRVSPEKWAVLSEGLPG---QLVYHAAARIVSFGAPPTLAATGREAGDSSVKRSIGKVAVLSAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLESSR 997
            + S+   LR +RP         +L L  R+ SS+  AA  L  LL +VAAG++SP AAA++          + EDV GFAKID  R  R GFPEV++ +GK++EQ+ HI   M R                 G+   ++ATRVSPEK   +   L     Q  Y+  ARIV   A   L  T  +  D    +  G V+VL AGTSDL ++EEAA+  ELAG  VTR +DVGVAG+HRLL     +++  VAICVAGMDGA+PGVV GL + PV+AVPTSVGYGAA  GLAPLLTMLNAC+PGV VVNIDNGFGAA  A ++    R
Sbjct:    2 LTSVAATLRAARP---------TLRLLARSSSSSAPAADALERLLQQVAAGEVSPAAAAARYRSSSSISNLEYEDVQGFAKIDTHRSARTGFPEVVYAEGKTSEQVAHILAHMAR----------------SGADPNVMATRVSPEKADDVLARLAAEELQFSYYPTARIV---ASRDLTKTESDVSDRDDTK--GVVSVLCAGTSDLPVSEEAAITLELAGYRVTRLYDVGVAGVHRLLRNQHVLRESDVAICVAGMDGALPGVVGGLTESPVIAVPTSVGYGAAFGGLAPLLTMLNACSPGVGVVNIDNGFGAAVLAARIRRRQR 298          
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Match: A0A6H1U2A2_9CYAN (Nickel pincer cofactor biosynthesis protein LarB n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1U2A2_9CYAN)

HSP 1 Score: 218 bits (556), Expect = 1.950e-63
Identity = 141/286 (49.30%), Postives = 175/286 (61.19%), Query Frame = 2
Query:  146 LSSLLARVAAGDLSPEAAASQLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVIFGDGKSAEQMTHIFIAMIRDAEQEGSTKAADTDEGGGSHRPIV-ATRVSPEKWAVLSEGLPGQLVYHAAARIVSFGAP---PTLAATGREAGDSSVKRSIGKVAVLSAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLES 991
            L SLL  VA+G+L PE A  +L  L        E VGGFA IDH R  R GFPEVI+G GK+ +Q+  I   M +                     P+V ATR++PE +  L E + G L Y+  ARI + G P   PT                 GK+ V+ AGT+DL +AEEAAV A+L G +V RF D+GVAGIHRLL+   ++  C VAI VAGM+GA+P VVAGLV CP +AVPTSVGYGA+ +GLAPLLTMLN+CA GV VVNIDNGFGAA  A ++L +
Sbjct:    6 LQSLLEAVASGNLPPEKALEELKHLAF------EPVGGFAHIDHHRNLRTGFPEVIWGPGKTPDQIAEIMEVMRQ-------------------RNPVVMATRIAPEVYDQLQERVKG-LFYYREARICTLGLPAVEPTYP---------------GKMGVICAGTADLPVAEEAAVTAQLCGFDVCRFWDIGVAGIHRLLAHREAIAACDVAIVVAGMEGALPSVVAGLVSCPTIAVPTSVGYGASFNGLAPLLTMLNSCAAGVGVVNIDNGFGAAILAGQILRT 250          
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Match: K3WGX4_GLOUD (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGX4_GLOUD)

HSP 1 Score: 219 bits (557), Expect = 3.620e-63
Identity = 151/302 (50.00%), Postives = 190/302 (62.91%), Query Frame = 2
Query:   80 RVQQSLSLRRRTLSSTEGAAGDLSSLLARVAAGDLSPEAAASQLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVIFGDGKSAEQMTHIFIAMIRDAEQEGSTKAADTDEGGGSHRPIVATRVSP-EKWAVLSEGLPG-QLVYHAAARIVSFGAPPTLAATGREAGDSSVKRSIGKVAVLSAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVK 979
            RVQQ      R LS+T      +  LL +VAAG++SP +A  Q   L      + EDVGG+AKID +R +R GFPEV++ +GK+ EQ+  I   M+         K  DT+        ++ATRV+P     +L +  P  + VY+  ARI+   A   L  +  E G  ++++ I    +L AGTSDL +AEEAA+  ELAG EV R +DVGVAGIHRLL     + +  VAICVAGMDGA+PGVV GL + PVVAVPTSVGYGAA SGLAPLLTMLNAC+PGV VVNIDNGFGAA  A K
Sbjct:   16 RVQQQHMAVGRWLSTTPAENSAMLRLLQQVAAGEVSPASAVEQCRRL------EYEDVGGYAKIDTNRFKRTGFPEVVYAEGKTPEQVAQIMELMV--------AKGVDTN--------VMATRVTPLSVEEILVKVAPDHKYVYYPTARIL---ASKDLNGSQGE-GKKALRKGI--ACILCAGTSDLPVAEEAAITLELAGYEVKRLYDVGVAGIHRLLRNQHVLHESDVAICVAGMDGALPGVVGGLTEIPVVAVPTSVGYGAAFSGLAPLLTMLNACSPGVGVVNIDNGFGAAVLAGK 289          
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Match: A0A6A3L485_9STRA (Phosphoribosylaminoimidazole carboxylase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3L485_9STRA)

HSP 1 Score: 219 bits (558), Expect = 5.800e-63
Identity = 142/283 (50.18%), Postives = 175/283 (61.84%), Query Frame = 2
Query:  155 LLARVAAGDLSPEAAASQLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVIFGDGKSAEQMTHIFIAMIRDAEQEGSTKAADTDEGGGSHRPIVATRVSPEKWAVLSEGLPGQ-LVYHAAARIVSFGAPPTLAATGR-EAGDSSVKRSIGKVAVLSAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLESSR 997
            LL RVA G +SP+AAA    P     GA+ E VG FAKID  R  R GFPEV++ + K+ EQ+  I   MI               +GG  +  ++A+RV+PE    +   +PGQ L Y+   RI++  A  T+      E     +++      VL AGTSDL +AEEAAV  ELA  +VTR +DVGVAGIHRLL     ++   VAICVAGMDGA+PGVV GL   PV+AVPTSVGYGAA  GLAPLLTMLNAC+PGV VVNIDNGFGAA  A ++L   R
Sbjct:   54 LLQRVADGKVSPQAAAELCGP-----GAEYEAVGDFAKIDTKREARTGFPEVVYAESKTPEQVAAIMKVMI---------------DGGEDN--VMASRVTPESAGAIQALMPGQHLTYYEVPRILASKALGTVKKKAEVEPHREDMEKETPTACVLCAGTSDLPVAEEAAVTLELADYKVTRLYDVGVAGIHRLLRNQHVLRASDVAICVAGMDGALPGVVGGLTPSPVIAVPTSVGYGAAFGGLAPLLTMLNACSPGVGVVNIDNGFGAAVLAARILRGVR 314          
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Match: B0CDX7_ACAM1 (Circadian phase modifier CpmA n=3 Tax=Acaryochloridaceae TaxID=1890429 RepID=B0CDX7_ACAM1)

HSP 1 Score: 217 bits (552), Expect = 9.090e-63
Identity = 138/283 (48.76%), Postives = 174/283 (61.48%), Query Frame = 2
Query:  146 LSSLLARVAAGDLSPEAAASQLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVIFGDGKSAEQMTHIFIAMIRDAEQEGSTKAADTDEGGGSHRPIVATRVSPEKWAVLSEGLPGQLVYHAAARIVSFGAPPTLAATGREAGDSSVKRSIGKVAVLSAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLESS 994
            L+ LL  ++ G++SP+ A  +L  L        E VG FAKIDH R  R GFPEVI+G GK+ +QM  IF  M   A+                   ++ATR+ PE +A L   LP QL Y   ARI S    P               +  G++ ++SAGT+D A+AEEAAV+A L G EVTRF DVGVAGIHRLLS    +    V I VAGM+GA+  VVAGLV CPV+AVPTS+GYGA+ +GLAPLLTMLN+CAPG+ VVNIDNGFGAA  A ++L ++
Sbjct:    7 LAQLLTAISTGEVSPDLALKKLKYLAY------EPVGDFAKIDHHRTLRTGFPEVIWGPGKTPKQMIEIFKTMEAQADC------------------VIATRIEPEVFAQLQPALP-QLQYFDKARICSTTPLPE------------TSKHPGQMGIVSAGTADQAVAEEAAVVATLWGYEVTRFWDVGVAGIHRLLSCRDEIASMDVLIVVAGMEGALASVVAGLVDCPVIAVPTSIGYGASFNGLAPLLTMLNSCAPGIGVVNIDNGFGAAMLAGQILRTA 252          
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Match: A0A7S2RJP4_9STRA (Phosphoribosylaminoimidazole carboxylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJP4_9STRA)

HSP 1 Score: 217 bits (553), Expect = 2.010e-62
Identity = 133/249 (53.41%), Postives = 160/249 (64.26%), Query Frame = 2
Query:  245 EDVGGFAKIDHDRRRRVGFPEVIFGDGKSAEQMTHIFIAMIRDAEQEGSTKAADTDEGGGSHRPIVATRVSPEKWAVLSEGLPGQLVYHAAARIVSFGAPPTLAATGREAGDSSVKRSIGKVAVLSAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGVAICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACAPGVSVVNIDNGFGAAAFAVKLLES 991
            E V  +A+IDH R RR G PEVIFG+GKS EQ+  IF  M R A++    +           R  +ATRVS   +A +   LP ++ Y+  ARI   G P  + +  R            ++AVL AGTSDL +AEEAAV AEL G  V R +DVGVAG+HRLL   P V+K  V I VAGMDGA+P VV GL  CPV AVP SVGYGAA  GLAPLLTMLN+C+PGVSV+NIDNGFGAA  AVKLL++
Sbjct:   65 EVVKQYARIDHGRGRRTGLPEVIFGEGKSVEQIISIFEVMKRHADELPEDQ----------RRVAMATRVSKSVFAEIQTALP-EVEYYEDARIAVLGQPKKVQSEER------------RIAVLCAGTSDLPVAEEAAVTAELFGYTVDRVYDVGVAGLHRLLDQFPIVRKASVTIVVAGMDGALPSVVGGLATCPVYAVPASVGYGAAFHGLAPLLTMLNSCSPGVSVLNIDNGFGAAMCAVKLLQT 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1334.2727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNM3_ECTSI1.010e-13773.93Phosphoribosylaminoimidazole carboxylase n=2 Tax=E... [more]
A0A835ZD94_9STRA9.130e-7552.08Phosphoribosylaminoimidazole carboxylase n=1 Tax=T... [more]
A0A8K2A2M8_9CYAN2.190e-6549.65Nickel pincer cofactor biosynthesis protein LarB n... [more]
UPI0016878F7A5.020e-6551.76Nickel pincer cofactor biosynthesis protein LarB n... [more]
A0A5D6Y0G0_9STRA2.010e-6448.01Phosphoribosylaminoimidazole carboxylase n=1 Tax=P... [more]
A0A6H1U2A2_9CYAN1.950e-6349.30Nickel pincer cofactor biosynthesis protein LarB n... [more]
K3WGX4_GLOUD3.620e-6350.00Phosphoribosylaminoimidazole carboxylase n=1 Tax=G... [more]
A0A6A3L485_9STRA5.800e-6350.18Phosphoribosylaminoimidazole carboxylase n=3 Tax=P... [more]
B0CDX7_ACAM19.090e-6348.76Circadian phase modifier CpmA n=3 Tax=Acaryochlori... [more]
A0A7S2RJP4_9STRA2.010e-6253.41Phosphoribosylaminoimidazole carboxylase n=1 Tax=R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1334contigH-canaliculatus_F_contig1334:11646..14361 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score411.8
Seed ortholog evalue3.2e-112
Seed eggNOG ortholog2880.D8LNM3
EggNOG free text desc.AIR carboxylase
EggNOG OGs2S0IG@2759,COG1691@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionNCAIR mutase (PurE)-related proteins
Ec32 orthologEc-08_006600.1
Exons3
Model size1776
Cds size1020
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1334.2727.1prot_H-canaliculatus_F_contig1334.2727.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1334 12383..14342 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929073.2659614-UTR-H-canaliculatus_F_contig1334:11645..123821622929073.2659614-UTR-H-canaliculatus_F_contig1334:11645..12382Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1334 11646..12382 -
1696845669.4505007-UTR-H-canaliculatus_F_contig1334:11645..123821696845669.4505007-UTR-H-canaliculatus_F_contig1334:11645..12382Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1334 11646..12382 -
1622929073.3380187-UTR-H-canaliculatus_F_contig1334:14342..143611622929073.3380187-UTR-H-canaliculatus_F_contig1334:14342..14361Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1334 14343..14361 -
1696845669.4899373-UTR-H-canaliculatus_F_contig1334:14342..143611696845669.4899373-UTR-H-canaliculatus_F_contig1334:14342..14361Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1334 14343..14361 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929073.2864037-CDS-H-canaliculatus_F_contig1334:12382..127331622929073.2864037-CDS-H-canaliculatus_F_contig1334:12382..12733Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1334 12383..12733 -
1696845669.4611695-CDS-H-canaliculatus_F_contig1334:12382..127331696845669.4611695-CDS-H-canaliculatus_F_contig1334:12382..12733Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1334 12383..12733 -
1622929073.2979653-CDS-H-canaliculatus_F_contig1334:13409..140121622929073.2979653-CDS-H-canaliculatus_F_contig1334:13409..14012Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1334 13410..14012 -
1696845669.4698434-CDS-H-canaliculatus_F_contig1334:13409..140121696845669.4698434-CDS-H-canaliculatus_F_contig1334:13409..14012Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1334 13410..14012 -
1622929073.3192267-CDS-H-canaliculatus_F_contig1334:14276..143421622929073.3192267-CDS-H-canaliculatus_F_contig1334:14276..14342Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1334 14277..14342 -
1696845669.4815338-CDS-H-canaliculatus_F_contig1334:14276..143421696845669.4815338-CDS-H-canaliculatus_F_contig1334:14276..14342Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1334 14277..14342 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1334.2727.1

>prot_H-canaliculatus_F_contig1334.2727.1 ID=prot_H-canaliculatus_F_contig1334.2727.1|Name=mRNA_H-canaliculatus_F_contig1334.2727.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=340bp
MPMPSLCRVLRLSRPCFFAGRVQQSLSLRRRTLSSTEGAAGDLSSLLARV
AAGDLSPEAAASQLSPLLVSGGAQAEDVGGFAKIDHDRRRRVGFPEVIFG
DGKSAEQMTHIFIAMIRDAEQEGSTKAADTDEGGGSHRPIVATRVSPEKW
AVLSEGLPGQLVYHAAARIVSFGAPPTLAATGREAGDSSVKRSIGKVAVL
SAGTSDLAIAEEAAVLAELAGAEVTRFHDVGVAGIHRLLSAIPSVQKCGV
AICVAGMDGAMPGVVAGLVKCPVVAVPTSVGYGAAMSGLAPLLTMLNACA
PGVSVVNIDNGFGAAAFAVKLLESSRAAAVDPENVTKDA*
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mRNA from alignment at H-canaliculatus_F_contig1334:11646..14361-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1334.2727.1 ID=mRNA_H-canaliculatus_F_contig1334.2727.1|Name=mRNA_H-canaliculatus_F_contig1334.2727.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2716bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1334:11646..14361- (Hapterophycus canaliculatus Oshoro5f female)
GTACCCCAACCGCAGTAGCATGCCCATGCCATCCTTATGCCGTGTACTGC GACTCAGCAGGCCTTGCTTTTTTGCTGGAAGAGTGGTGAGAAGTTACCTC GTGGAGTTTGTCACCGATGAACCGTGGATGCCTTCCCTGTTGCTCACGTA TGGGTTGGTATTGCTGACTGTTTTTCCATCGGCCGTTGTGTATGTATCCG CCGAATGCGTTTGTACGCTGCTTAGACACGCCTGTCGAACACGCCTTTCC ACTTTTGCAGTCACTTGTTACGCCGTCTTCGTTGAGACCTCAGTTGGAAC ACCTCCGTCTGCCGCGATCCTTTGTGCTCTCCTCCATTTTGCACAACAGC AGCAGTCCTTATCTCTTCGTCGAAGAACGCTCTCGTCGACAGAAGGGGCA GCAGGTGATTTATCGTCCCTCCTCGCCAGAGTCGCCGCAGGAGATCTTTC CCCCGAGGCAGCAGCATCCCAGCTTTCCCCACTGCTCGTATCTGGGGGGG CCCAGGCGGAGGACGTCGGCGGGTTCGCGAAAATCGACCACGACCGGAGA CGGCGGGTCGGGTTTCCGGAGGTGATCTTCGGCGACGGCAAATCAGCCGA GCAGATGACCCATATCTTCATCGCGATGATCCGCGACGCCGAGCAGGAGG GCAGCACGAAAGCGGCGGATACAGACGAGGGTGGTGGGAGTCATAGGCCC ATCGTTGCGACGAGAGTGTCTCCGGAGAAGTGGGCTGTCCTGTCGGAGGG CCTTCCGGGGCAGCTGGTGTACCACGCAGCCGCAAGGATCGTGTCGTTTG GGGCGCCGCCGACTCTTGCGGCGACAGGGAGGGAAGCTGGCGACAGCTCG GTCAAGCGCAGTATTGGAAAGGTGGCAGTGTTGAGCGCAGGGACTTCGGA CCTTGCCATCGCAGAGGAAGCGGCTGTTCTGGCGGAGCTAGCAGGAGCAG AGGTGAGAGGGGAGGTGAAAAAAAACACGAGATAGGTGTAGTCTGGTGAC AAGGAGATATTGCGGGCTTTGAGTAAGTATCCGGTCCGGATAGACTTCGC TTGCAGACGTTCGGCAGGTGGACTCAACTCCGGTGCTTCGAAGGTTGTGA CAAAACTAGTCGCGGCAGAGACAGGGTCGGAAATTGAAGTTCGTGCTACC CTTACAACCCTCGAACGAGCGTGGTGGACTGTGAACATTACCGACCTTTC TGTCTCCGTCGATTTCGTTCGAAGGTTCTCCAACTTCCGACGGATCCTCC GACCAATCGTCTTGGGACTAGGATCGAACAATCTCGTCGCCCGCTTTCCA ATGTTCTTGAGCAGTTCGTCCGTTCCCAGAAAACATCTTGCCAGTCACCG CATTCCTATCGGAACCTACGCATCATTTGGGTTTGGCTATGCTATTTCAT TACGTAGCGAGTGTGGTTGCCAAGCCCCCGGGCTGGGTCCGTGCGCTTTC AAAATGGCGCGCCGTGGTGAAATAGGGTCCTGGGTAGAGCGAGACTTATT TTAGATCGATCGCGGGGCCACCTCGCGGCTTTCGCTTCTCACCCATCTCC GTCGGAAAGCGGCCCTCGCTTTTCTCTTCATGCCCCCCCCCCCGCGCCTC TTCGCCTTCCACTCTCTCTCTCGTCCAGGTGACTCGTTTCCACGACGTAG GCGTGGCAGGCATACACCGCCTACTCTCCGCAATCCCGTCAGTACAGAAG TGCGGCGTGGCCATCTGCGTGGCGGGCATGGACGGTGCGATGCCGGGAGT GGTAGCTGGCTTGGTCAAGTGCCCCGTAGTAGCCGTACCTACCAGCGTGG GGTACGGAGCGGCGATGTCTGGTCTTGCTCCGTTGTTGACCATGCTCAAC GCGTGCGCCCCCGGGGTGTCGGTGGTAAACATTGACAACGGCTTCGGAGC CGCCGCATTTGCCGTGAAACTACTTGAAAGTAGCAGAGCCGCTGCCGTTG ATCCTGAGAACGTGACGAAAGATGCGTAGCAAGGAAGGGAGCCGGGTTTG TGCTCCACCTCTTTTTAATACGGCCACGTATGGAGTATTAGGAATGCGGA GCGGGGGGTGACAAGAGGTTCGGGTAAGGGTTGCAGATTGCGTATATTTT GGGGGAGGGGGTGCTAAGACCGTTCTGTATGGGTGACAAGACTTGCTCAC CAATGCTCCCGCGCGTGTGAAATCTCGAATGTGCATGATGCTGGGATCTC CGAGCGGCTTTGAAGCGGGGTGCAAAGTCATCCTTGAGCAATCTCGCTGG AGTTTTGCCTTGCTTTGCACTGACTTGAAGGTGTTCGCGTGCGTGCTGCA CGCCTGTACCGGGGCGTTTCTTGTTTTTGTTCAATGCCGCGCAGTGCGTA GGTGGGATGCTGTAAGTGTACATGCATATTCTCTCCCTTTCGGTTTCACA AGGTGTACCCACTTTCCTGTACGCGATGAAGAGAAGACAGATGCTCCTCT ACGCGGCAATTAGCATGCGGATGCCCTACGTGTCTGGGGCTGACTTTTGT GGTTTTGTGGTTTGGCGGCCCTTGCTTTGGGTTACTCGGTACCATCTGAC TTTCTCCGCCTTGTGAGGCGGGTTAGTAACATGAACAGGCTTCAGGGATG AAGACAACCTCCACAGTCCTCTGCCAGCACTTTTTGGACGTCAGACGCTC GGCGGTTGCACCCATTGTTTGTACTCGATGCGCGGAAACCCGATGGGAAG TGAAAGAAGGTTATCT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1334:11646..14361-

>mRNA_H-canaliculatus_F_contig1334.2727.1 ID=mRNA_H-canaliculatus_F_contig1334.2727.1|Name=mRNA_H-canaliculatus_F_contig1334.2727.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2040bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1334:11646..14361- (Hapterophycus canaliculatus Oshoro5f female)
ATGCCCATGCCATCCTTATGCCGTGTACTGCGACTCAGCAGGCCTTGCTT
TTTTGCTGGAAGAGTGATGCCCATGCCATCCTTATGCCGTGTACTGCGAC
TCAGCAGGCCTTGCTTTTTTGCTGGAAGAGTGCAGCAGTCCTTATCTCTT
CGTCGAAGAACGCTCTCGTCGACAGAAGGGGCAGCAGGTGATTTATCGTC
CCTCCTCGCCAGAGTCGCCGCAGGAGATCTTTCCCCCGAGGCAGCAGCAT
CCCAGCTTTCCCCACTGCTCGTATCTGGGGGGGCCCAGGCGGAGGACGTC
GGCGGGTTCGCGAAAATCGACCACGACCGGAGACGGCGGGTCGGGTTTCC
GGAGGTGATCTTCGGCGACGGCAAATCAGCCGAGCAGATGACCCATATCT
TCATCGCGATGATCCGCGACGCCGAGCAGGAGGGCAGCACGAAAGCGGCG
GATACAGACGAGGGTGGTGGGAGTCATAGGCCCATCGTTGCGACGAGAGT
GTCTCCGGAGAAGTGGGCTGTCCTGTCGGAGGGCCTTCCGGGGCAGCTGG
TGTACCACGCAGCCGCAAGGATCGTGTCGTTTGGGGCGCCGCCGACTCTT
GCGGCGACAGGGAGGGAAGCTGGCGACAGCTCGGTCAAGCGCAGTATTGG
AAAGGTGGCAGTGTTGAGCGCAGGGACTTCGGACCTTGCCATCGCAGAGG
AAGCGGCTGTTCTGGCGGAGCTAGCAGGAGCAGAGCAGCAGTCCTTATCT
CTTCGTCGAAGAACGCTCTCGTCGACAGAAGGGGCAGCAGGTGATTTATC
GTCCCTCCTCGCCAGAGTCGCCGCAGGAGATCTTTCCCCCGAGGCAGCAG
CATCCCAGCTTTCCCCACTGCTCGTATCTGGGGGGGCCCAGGCGGAGGAC
GTCGGCGGGTTCGCGAAAATCGACCACGACCGGAGACGGCGGGTCGGGTT
TCCGGAGGTGATCTTCGGCGACGGCAAATCAGCCGAGCAGATGACCCATA
TCTTCATCGCGATGATCCGCGACGCCGAGCAGGAGGGCAGCACGAAAGCG
GCGGATACAGACGAGGGTGGTGGGAGTCATAGGCCCATCGTTGCGACGAG
AGTGTCTCCGGAGAAGTGGGCTGTCCTGTCGGAGGGCCTTCCGGGGCAGC
TGGTGTACCACGCAGCCGCAAGGATCGTGTCGTTTGGGGCGCCGCCGACT
CTTGCGGCGACAGGGAGGGAAGCTGGCGACAGCTCGGTCAAGCGCAGTAT
TGGAAAGGTGGCAGTGTTGAGCGCAGGGACTTCGGACCTTGCCATCGCAG
AGGAAGCGGCTGTTCTGGCGGAGCTAGCAGGAGCAGAGGTGACTCGTTTC
CACGACGTAGGCGTGGCAGGCATACACCGCCTACTCTCCGCAATCCCGTC
AGTACAGAAGTGCGGCGTGGCCATCTGCGTGGCGGGCATGGACGGTGCGA
TGCCGGGAGTGGTAGCTGGCTTGGTCAAGTGCCCCGTAGTAGCCGTACCT
ACCAGCGTGGGGTACGGAGCGGCGATGTCTGGTCTTGCTCCGTTGTTGAC
CATGCTCAACGCGTGCGCCCCCGGGGTGTCGGTGGTAAACATTGACAACG
GCTTCGGAGCCGCCGCATTTGCCGTGAAACTACTTGAAAGTAGCAGAGCC
GCTGCCGTTGATCCTGAGAACGTGACGAAAGATGCGTAGGTGACTCGTTT
CCACGACGTAGGCGTGGCAGGCATACACCGCCTACTCTCCGCAATCCCGT
CAGTACAGAAGTGCGGCGTGGCCATCTGCGTGGCGGGCATGGACGGTGCG
ATGCCGGGAGTGGTAGCTGGCTTGGTCAAGTGCCCCGTAGTAGCCGTACC
TACCAGCGTGGGGTACGGAGCGGCGATGTCTGGTCTTGCTCCGTTGTTGA
CCATGCTCAACGCGTGCGCCCCCGGGGTGTCGGTGGTAAACATTGACAAC
GGCTTCGGAGCCGCCGCATTTGCCGTGAAACTACTTGAAAGTAGCAGAGC
CGCTGCCGTTGATCCTGAGAACGTGACGAAAGATGCGTAG
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