mRNA_H-canaliculatus_F_contig1330.2702.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Match: D8LGT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT9_ECTSI) HSP 1 Score: 295 bits (755), Expect = 9.240e-97 Identity = 149/189 (78.84%), Postives = 166/189 (87.83%), Query Frame = 1
Query: 1 QVFEVDQELVLRVKEALLTTAAAADEVAASVAGFRERRDGGVGQARVLAVEADLSVKGWEGELFEAGFDPSLPSAWILEGLTMYLDEQELLGLIQTLSALCSPGSAFCATCVSTESVVRAQASDRPLMGTWKWGSDDPQGFFQDNFPGGEGWSFRGVSCGAPGEFPDGADYGVGFEGKAPAYVIGYKST 567
+VFEVDQ LVLRVK ALLT AAAADEVAA++AGFRERRDGGVGQ RV+ VEADLSV+GW+GELFEAGFDPSLPSAWILEGLTMYL+E+EL+ L++ L++L SPGSAFCATCVS ESV RAQ S PLMG WKWGSD+PQ FF+ NFP EGWSF GV+CG PGEFP GADYGVGF GKAPAYVIGY S+
Sbjct: 199 KVFEVDQALVLRVKGALLTQAAAADEVAAALAGFRERRDGGVGQGRVVPVEADLSVEGWQGELFEAGFDPSLPSAWILEGLTMYLEEKELVALLRVLASLSSPGSAFCATCVSAESVERAQNSASPLMGRWKWGSDNPQAFFEANFP--EGWSFNGVTCGTPGEFPQGADYGVGFVGKAPAYVIGYFSS 385
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Match: D7FXP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP3_ECTSI) HSP 1 Score: 258 bits (660), Expect = 1.670e-83 Identity = 135/188 (71.81%), Postives = 153/188 (81.38%), Query Frame = 1
Query: 1 QVFEVDQELVLRVKEALLTTAAAADEVAASVAGFRERRDGGVGQARVLAVEADLSVKGWEGELFEAGFDPSLPSAWILEGLTMYLDEQELLGLIQTLSALCSPGSAFCATCVSTESVVRAQASDRPLMGTWKWGSDDPQGFFQDNFPGGEGWSFRGVSCGAPGEFPDGADYGVGFEGKAPAYVIGYKS 564
+VFEVDQ LVLRVK ALLT AAAADEVAA++AGFRERRDGGVGQ RV+ V+A LSV+GW+GELFEAG DPSLPSAWILEGL MYL+E+EL+ L++ L++L SPGSAFCAT VS ESV R S P MG WK GSD P FF+ N P +GWSF GV+CG PGEFP+GADYGV F GKA AYVIGY S
Sbjct: 104 KVFEVDQALVLRVKSALLTQAAAADEVAAALAGFRERRDGGVGQGRVVPVQAALSVEGWQGELFEAGSDPSLPSAWILEGLNMYLEEKELVALLRVLASLSSPGSAFCATYVSAESVERTHISASPPMGRWKRGSDKPPAFFEANSP--QGWSFNGVTCGTPGEFPEGADYGVDFVGKAAAYVIGYFS 289
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Match: A0A6H5KGH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH3_9PHAE) HSP 1 Score: 139 bits (350), Expect = 1.270e-38 Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 1
Query: 310 GSAFCATCVSTESVVRAQASDRPLMGTWKWGSDDPQGFFQDNFPGGEGWSFRGVSCGAPGEFPDGADYGVGFEGKAPAYVIGYKST 567
GSAFCATCVS ESV RAQ + PLMG WKWGSD+PQ FF+ NFP EGWSF GV+CG PGEFP+GADYGVGF GKAPAYVIGY S+
Sbjct: 74 GSAFCATCVSAESVERAQNNASPLMGRWKWGSDNPQAFFEANFP--EGWSFNGVTCGTPGEFPEGADYGVGFVGKAPAYVIGYFSS 157
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Match: D7FXP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP1_ECTSI) HSP 1 Score: 119 bits (297), Expect = 1.230e-31 Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 1
Query: 1 QVFEVDQELVLRVKEALLTTAAAADEVAASVAGFRERRDGGVGQARVLAVEADLSVKGWEGELFEAGFDPSLPSA 225
+VFEVDQ LVLRVK ALLT AAAADEVAA+VAGFRERRD GVGQ RV+ VEADL V+GW+GELFEAGFDPSLPSA
Sbjct: 15 KVFEVDQALVLRVKSALLTQAAAADEVAAAVAGFRERRDRGVGQGRVVPVEADLRVEGWQGELFEAGFDPSLPSA 89
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Match: A0A6H5KWH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWH6_9PHAE) HSP 1 Score: 106 bits (265), Expect = 5.050e-27 Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 1
Query: 382 MGTWKWGSDDPQGFFQDNFPGGEGWSFRGVSCGAPGEFPDGADYGVGFEGKAPAYVIGYKST 567
MG WKWGSD+PQ FF+ NFP EGWSF GV+CG PGEFP+GADYGVGF GKAPAYVIGY S+
Sbjct: 1 MGHWKWGSDNPQAFFEANFP--EGWSFNGVTCGTPGEFPEGADYGVGFVGKAPAYVIGYFSS 60
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Match: A0A7S0WXA3_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WXA3_9CHLO) HSP 1 Score: 88.6 bits (218), Expect = 2.310e-17 Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 1
Query: 7 FEVDQELVLRVKEALLTTAAAADEVAASVAGFRERRDGGVGQARVLAVEADLSVKGWEGELFEAGFDPSLPSAWILEGLTMYLDEQELLGLIQTLSALCSPGSAFCATCVSTESVVRAQASDRP-LMGTWKWGSDDPQGFFQDNFPGGEGWSFRGV 471
FEVD VL K+ +L AAA + + R+R +AV A+L + W+ L AGF+ SLP+ W+ EGL MYL+ + L + L +PGSA + V++ SV +AQAS + LM TWKWGS+DP+ FF GW+ + V
Sbjct: 170 FEVDLPEVLAAKQVVLDRCAAAGTLP-ELQLARKR----------IAVGANLEEEAWDWRLLAAGFNRSLPTVWLAEGLLMYLEPAAVDRLAAKIFRLSAPGSALLVSMVNSVSVAKAQASQKSALMQTWKWGSNDPRAFFSAF-----GWTVQSV 309
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Match: A0A371Q534_9ACTN (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Streptomyces inhibens TaxID=2293571 RepID=A0A371Q534_9ACTN) HSP 1 Score: 81.3 bits (199), Expect = 4.040e-15 Identity = 56/152 (36.84%), Postives = 81/152 (53.29%), Query Frame = 1
Query: 88 SVAGFRERRDGGVGQARVLA----VEADLSVKGWEGELFEAGFDPSLPSAWILEGLTMYLDEQELLGLIQTLSALCSPGSAFCATCVSTESV----VRAQASDRPLMGT-WKWGSDDPQGFFQDNFPGGEGWSFRGVSCGAPGEFPDGADYG 516
+V F++ R +G AR V DL+ WE EL AG+DP+LPS W+LEGL Y+ E + ++ ++A+ +PGS F A V+T ++ +RA G W +G+DDP+G F G G+ V PGE DGAD+G
Sbjct: 122 AVLAFKKER---LGDARPQVDHHTVAVDLTADNWEDELIAAGYDPALPSTWLLEGLLYYIPESDARRMLDRVAAIAAPGSRFAADIVNTAALELPHMRALLDVFAGWGCPWLFGTDDPEGLFA-----GHGFDIEAVQ---PGE--DGADFG 260
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Match: A0A5R9FMW1_9ACTN (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Streptomyces montanus TaxID=2580423 RepID=A0A5R9FMW1_9ACTN) HSP 1 Score: 79.3 bits (194), Expect = 2.070e-14 Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 148 VEADLSVKGWEGELFEAGFDPSLPSAWILEGLTMYLDEQELLGLIQTLSALCSPGSAFCATCVSTESVVRAQASDRPLMGT-------WKWGSDDPQGFFQDNFPGGEGWSFRGVSCGAPGEFPDGADYG 516
+E DL V WE EL AG+DP LPS W+LEGL Y+ E+++ ++ ++A C+PGS A V+ ++ S R L+ W +GSDDP+ F G G+ + V PGE +GADYG
Sbjct: 143 IEVDLVVDDWETELVAAGYDPGLPSTWLLEGLLYYIPERDVHRMLDRVAAHCAPGSRIAADIVNEAALTLP--SMRGLLDVFAGWGCPWVFGSDDPEALFA-----GHGYDVQAVQ---PGE--EGADYG 260
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Match: A0A7S3UT70_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT70_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 3.310e-14 Identity = 57/170 (33.53%), Postives = 87/170 (51.18%), Query Frame = 1
Query: 7 FEVDQELVLRVKEALLTTAAAADEVAASVAGFRERRDGGVGQARVLAVEADLSVKGWEGELFEAGFDPSLPSAWILEGLTMYLDEQELLGLIQTLSALCSPGSAFCA-TCVSTESVVRAQASDRPLMGTWKWGSDDPQGFFQDNFPGGEGWSFRGVSCGAPGEFPDGADY 513
+EVDQE VL KE L+ + + RR +V DL+ ++ L E+GFDP++PS WILEGL+MYL E + + L++ +++LC ++F + V+T++V AQ S PLM W +G+D + V+ G PG +P GA Y
Sbjct: 193 YEVDQEKVLEEKEKLMA-------LLPRKLKLKHRRK---------SVYFDLTNGNFKKMLLESGFDPTMPSVWILEGLSMYLSEAQNIALLEQIASLCLHSASFVGLSFVNTKAVENAQNSQSPLMQQWVFGTDSLGDLLSKLESPPKFHIISTVNLGDPGGYPTGASY 346
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Match: A0A7C9TWE1_9CYAN (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TWE1_9CYAN) HSP 1 Score: 79.0 bits (193), Expect = 3.550e-14 Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 145 AVEADLSVKGWEGELFEAGFDPSLPSAWILEGLTMYLDEQELLGLIQTLSALCSPGSAFCATCVSTESVVRAQASDRPLMGTWKWGSDDPQGFFQ 429
A+ ADL W EL +AG+ SLPS W+LEGL MYLDE ++ L++T++ L +PGS A +S +SV + + G W++G+D+P+ F+
Sbjct: 148 AIGADLRDPAWFEELLKAGYQVSLPSVWLLEGLLMYLDEIQVRCLLETITRLSAPGSCLGADLISVKSVQVGRKKGGRVGGHWRFGTDEPELLFE 242 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1330.2702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1330.2702.1 >prot_H-canaliculatus_F_contig1330.2702.1 ID=prot_H-canaliculatus_F_contig1330.2702.1|Name=mRNA_H-canaliculatus_F_contig1330.2702.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=189bp QVFEVDQELVLRVKEALLTTAAAADEVAASVAGFRERRDGGVGQARVLAVback to top mRNA from alignment at H-canaliculatus_F_contig1330:25222..27800- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1330.2702.1 ID=mRNA_H-canaliculatus_F_contig1330.2702.1|Name=mRNA_H-canaliculatus_F_contig1330.2702.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2579bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1330:25222..27800- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1330:25222..27800- >mRNA_H-canaliculatus_F_contig1330.2702.1 ID=mRNA_H-canaliculatus_F_contig1330.2702.1|Name=mRNA_H-canaliculatus_F_contig1330.2702.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1134bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1330:25222..27800- (Hapterophycus canaliculatus Oshoro5f female)back to top |