mRNA_H-canaliculatus_F_contig13294.2690.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Match: A0A6H5L0R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0R0_9PHAE) HSP 1 Score: 174 bits (441), Expect = 3.980e-51 Identity = 90/117 (76.92%), Postives = 101/117 (86.32%), Query Frame = 1
Query: 1 KMHGMAIRRNTIQCIQAILDATAMLGIQLEGGDAAVAAATRVLKLDEGTELTPEIVQQDVTLLWQDGGVQQAYGERHRYWLLDAAPYYFDNVERFASPTFAPNEEDMLMARARTSGM 351
+MHG+AIRRNTIQ +QAIL+AT +LGI LEG A AAA RVL LDEGT+L+PEIVQ DV LLW +GGV+ AYGERHRYWLLDAA YYFDNVERF S +FAPNEEDMLMARARTSG+
Sbjct: 67 RMHGLAIRRNTIQSMQAILEATVVLGIPLEGE--AAAAAGRVLMLDEGTDLSPEIVQ-DVVLLWHNGGVRAAYGERHRYWLLDAAAYYFDNVERFGSESFAPNEEDMLMARARTSGI 180
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Match: D8LSD7_ECTSI (GPA6, alpha subunit of a heterotrimeric G protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD7_ECTSI) HSP 1 Score: 155 bits (392), Expect = 2.270e-44 Identity = 79/108 (73.15%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 1 KMHGMAIRRNTIQCIQAILDATAMLGIQLEGGDAAVAAATRVLKLDEGTELTPEIVQQDVTLLWQDGGVQQAYGERHRYWLLDAAPYYFDNVERFASPTFAPNEEDML 324
+MHG+AIRRNTIQ +QAIL+AT +LGI LEG A AAA RVL LDEGT+L+P+IVQ DV LLW +GGV+ AYGERHRYWLLDAA YYFDNVERF S +FAPNEED++
Sbjct: 67 RMHGLAIRRNTIQSMQAILEATMVLGIPLEGE--AAAAAGRVLMLDEGTDLSPDIVQ-DVVLLWHNGGVRAAYGERHRYWLLDAAAYYFDNVERFGSESFAPNEEDIM 171
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Match: A0A835ZKP0_9STRA (GPA4, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKP0_9STRA) HSP 1 Score: 110 bits (276), Expect = 9.970e-27 Identity = 55/112 (49.11%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 16 AIRRNTIQCIQAILDATAMLGIQLEGGDAAVAAATRVLKLDEGTELTPEIVQQDVTLLWQDGGVQQAYGERHRYWLLDAAPYYFDNVERFASPTFAPNEEDMLMARARTSGM 351
AIRRN I+ +QA+L A + GI LE +A AA TR++ L E + LT ++ D+T LW DGGV+ Y +R YWLLDAA YYF+ V+R + P + P EED++M R RT+G+
Sbjct: 54 AIRRNAIESMQAVLQAMKVYGIPLED-EAKAAARTRIIGLSEDSALTKDVAD-DITALWNDGGVKACYEKRDLYWLLDAAAYYFNEVQRISDPKYEPTEEDVIMTRVRTTGI 163
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Match: A0A835YY90_9STRA (GPA4, alpha subunit of a heterotrimeric G protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY90_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.760e-24 Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 16 AIRRNTIQCIQAILDATAMLGIQLEGGDAAVAAATRVLKLDEGTELTPEIVQQDVTLLWQDGGVQQAYGERHRYWLLDAAPYYFDNVERFASPTFAPNEEDMLMARARTSGM 351
AIR+N+++C+QA+L A + I L +A A TR+L + E T + ++ D+T LW D GV+ Y +R YWLLDAA YYFD V+R A P F P E+D++M R RT+G+
Sbjct: 67 AIRKNSVECMQAVLQAMTVHSIPL-ANEANAEARTRILTIQEDTTFSQQVAD-DITQLWSDTGVKACYEKRDLYWLLDAAAYYFDEVQRIADPGFEPTEDDVIMTRVRTTGI 176
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Match: A0A6S9GGW2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GGW2_HETAK) HSP 1 Score: 94.0 bits (232), Expect = 1.920e-20 Identity = 53/113 (46.90%), Postives = 69/113 (61.06%), Query Frame = 1
Query: 16 AIRRNTIQCIQAILDATAMLGIQLEGGDAAVAAATRVLKLDEGTELTPEIVQQDVTLLWQDGGVQQAYGERHRYWLLDAAPYYFDNVERFASPTFA-PNEEDMLMARARTSGM 351
AIRRN I +Q IL+A L I + + + AATRV ++ LTP++ Q ++ LW D GVQ Y R YWLLDAAPYY D V R + +A P EEDM+M R RT+G+
Sbjct: 73 AIRRNAIDVMQTILEAMDTLSIDVSKEELSE-AATRVKEIAADATLTPDLAQ-NIADLWADAGVQACYERRAEYWLLDAAPYYLDEVLRLGAADYADPTEEDMIMTRVRTTGI 183
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Match: UPI00064504C2 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064504C2) HSP 1 Score: 93.2 bits (230), Expect = 4.420e-20 Identity = 43/116 (37.07%), Postives = 68/116 (58.62%), Query Frame = 1
Query: 7 HGMAIRRNTIQCIQAILDATAMLGIQLEGGDAAV-AAATRVLKLDEGTELTPEIVQQDVTLLWQDGGVQQAYGERHRYWLLDAAPYYFDNVERFASPTFAPNEEDMLMARARTSGM 351
+ + I +NT+ C+Q +L+A L ++L +A A + R + ++ + P + D+ LW+D +Q+ + R YW LDA PYYFDN+ERF F P EED +M R RT+G+
Sbjct: 70 YAINIHKNTVLCMQVLLEAADTLHVELTDPEAKKRATSVRAFQFEQDVKQMPVNIGLDIEELWKDPDIQKIWERRSEYWFLDATPYYFDNIERFLEDDFRPTEEDCIMTRVRTTGI 185
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Match: UPI0006449EC0 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449EC0) HSP 1 Score: 91.7 bits (226), Expect = 1.590e-19 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 1
Query: 19 IRRNTIQCIQAILDATAMLGIQLEGGDAAVAAAT-RVLKLDEGTELTPEIVQQDVTLLWQDGGVQQAYGERHRYWLLDAAPYYFDNVERFASPTFAPNEEDMLMARARTSGM 351
I +NT+ C+Q +L+A LG++L ++ A R + ++ + P + D+ LW+D +Q+ + R YW LDA PYYFDN+ RF F P EED++M R RT+G+
Sbjct: 73 IHKNTVLCMQVLLEACETLGVELSDQESKKRANNIRSFQFEQEVKQMPVSIGLDIEELWKDQDIQKIWERRSEYWFLDATPYYFDNINRFLDDDFRPTEEDIIMTRVRTTGI 184
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Match: A0A482SN96_9ARCH (Guanine nucleotide-binding protein subunit alpha n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SN96_9ARCH) HSP 1 Score: 89.7 bits (221), Expect = 2.340e-19 Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 16 AIRRNTIQCIQAILDATAMLGIQLEGGDAAVAAATRVLKLDEGTELTPEIVQQDVTLLWQDGGVQQAYGERHRYWLLDAAPYYFDNVERFASPTFAPNEEDMLMARARTSGM 351
A++RN I+ +Q +L A L I L D A+ +++ LD + +T + + LW+D G+Q+ Y R YW +D PYY + V R A +FAPNEEDM+MAR RT+G+
Sbjct: 78 ALQRNVIEAMQTLLSAAKQLNIPLANPDLEE-ASEKIIALDSDSRITLQQAPM-IDQLWKDVGIQKVYARRDEYWNMDGTPYYLNEVYRIADNSFAPNEEDMIMARIRTTGI 187
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Match: F4PVC6_CAVFA (G-protein subunit alpha 8 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PVC6_CAVFA) HSP 1 Score: 90.5 bits (223), Expect = 3.940e-19 Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 19 IRRNTIQCIQAILDATAMLGIQLEGGDAAVAAAT-RVLKLDEGTELTPEIVQQDVTLLWQDGGVQQAYGERHRYWLLDAAPYYFDNVERFASPTFAPNEEDMLMARARTSGM 351
I +NT+ C+Q +L+A L I+L + A T R + ++ T+ P + D+ LW+D +Q + R +W LDA PYYF+N++RF F P EED +M R RT+G+
Sbjct: 70 IHKNTVLCMQVLLEAGETLNIELSNPETKKRANTVRSFQFEQDTKQMPVSIGLDIEELWKDQDIQSVWERRSEFWFLDATPYYFENIQRFLEDDFRPTEEDCIMTRVRTTGI 181
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Match: D8LBA2_ECTSI (GPA4, alpha subunit of a heterotrimeric G protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA2_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 7.580e-19 Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 1
Query: 13 MAIRRNTIQCIQAILDATAMLGIQLEGGDAAVAAATRVLKLDEGTELTPEIVQQDVTLLWQDGGVQQAYGERHRYWLLDAAPYYFDNVERFASPTFAPNEEDMLMARARTSGM 351
MAIR+N+I+C+Q +L A I L + A RV + E TP + D+ LW D GV++AYG + YWLLD A YYFDN R F P +ED++M R RT+G+
Sbjct: 73 MAIRKNSIECMQGVLRAMDTFEITLGLAENAP-RKKRVREFAEEGVFTPAVAD-DIASLWADPGVREAYGRQSEYWLLDGASYYFDNALRLGQADFVPTDEDVIMTRIRTTGI 183 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13294.2690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13294.2690.1 >prot_H-canaliculatus_F_contig13294.2690.1 ID=prot_H-canaliculatus_F_contig13294.2690.1|Name=mRNA_H-canaliculatus_F_contig13294.2690.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=117bp MHGMAIRRNTIQCIQAILDATAMLGIQLEGGDAAVAAATRVLKLDEGTELback to top mRNA from alignment at H-canaliculatus_F_contig13294:60..2405- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13294.2690.1 ID=mRNA_H-canaliculatus_F_contig13294.2690.1|Name=mRNA_H-canaliculatus_F_contig13294.2690.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2346bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13294:60..2405- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13294:60..2405- >mRNA_H-canaliculatus_F_contig13294.2690.1 ID=mRNA_H-canaliculatus_F_contig13294.2690.1|Name=mRNA_H-canaliculatus_F_contig13294.2690.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=702bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13294:60..2405- (Hapterophycus canaliculatus Oshoro5f female)back to top |