prot_H-canaliculatus_F_contig132.2633.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig132.2633.1
Unique Nameprot_H-canaliculatus_F_contig132.2633.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length300
Homology
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BLAST of mRNA_H-canaliculatus_F_contig132.2633.1 vs. uniprot
Match: D7G2I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I5_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 9.990e-14
Identity = 131/311 (42.12%), Postives = 151/311 (48.55%), Query Frame = 0 
Query:    1 MESLPSKMREADQHLDRLGGILRSLRAPPSEQVPTPTTLRRLKQGKPQKEHQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQDERWFVRVSRSSSLSSQSRSRRAPQYSQSETTTS---PTIHCDRYRNHRQQHHCCVAAASPGGCLINKPEIDFVPAEEQSDRLAHRRPVERAAVHDEA--PTPKDQRAGDVDSDDPPRAAA--------ADAESVPPAHCTGVDTDASIAAAAV--------AGATSSIQEKVSXXXXXLSLRRRVIRTWWRGLSSGVCFAAGAWAREGHGLFGAALALTAM 290
            MESLPSKM+EADQHLDRLG ILRSLRA PS++V   +  +  +Q +  +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                       P +H           H C   A+  G L +KPE D   A +Q   L   R  E   V      PTP+         D  PR           AD+  VP A    V     +A A          AG  +++ E         SLR R IRTWWRGLS G+CFAAGAWAREGHG FGA LAL A+
Sbjct:    1 MESLPSKMQEADQHLDRLGSILRSLRARPSDRVFFSSAAQLTEQARRNENKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPALHS----------HRCSGTATTDGRLADKPESD---ARKQDAPLRRPRQAEVGDVGRSVAPPTPQFHERVSGADDKGPRLGXXXXXXXXXADSGFVPSAPSIKVVVRPGVAGAEAGSCGDGGGAGTAAAVAETTKSVRGP-SLRERAIRTWWRGLSCGICFAAGAWAREGHGTFGALLALAAV 297
[Close]
BLAST of mRNA_H-canaliculatus_F_contig132.2633.1 vs. uniprot
Match: A0A6H5L086_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L086_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.070e-11
Identity = 65/171 (38.01%), Postives = 78/171 (45.61%), Query Frame = 0 
Query:  139 HCCVAAASPGGCLINKPEIDFVPAEEQSDRLAHRRPVERAAVHDEA--PTPK-DQRAGDVDSDDPPRAA--------AADAESVPPAHCTGVDTDASIAAAAVA--------GATSSIQEKVSXXXXXLSLRRRVIRTWWRGLSSGVCFAAGAWAREGHGLFGAALALTAM 290
            H C    S    L +KPE D   A +Q   L   R  +  AV      PTP+  +R G  D D  PR            D + VP A  + V     +  A           G  +S   + +      SLR R IRTWWRGLS G+CFAAGAWAREGHG FGA LAL A+
Sbjct:  137 HRCSGTTSTADRLADKPESD---ARKQDAPLRRPRQADMGAVRRSVAPPTPQFHERVGGAD-DKGPRLGNXXXXXXXXPDGDFVPWAPSSTVVVRPGVVGAEAGSCGDGGGTGTAASAVAETTKRVRGPSLRERAIRTWWRGLSCGICFAAGAWAREGHGTFGALLALAAV 303
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig132.2633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2I5_ECTSI9.990e-1442.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L086_9PHAE2.070e-1138.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 297..299
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..274
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 275..279
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 280..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig132contigH-canaliculatus_F_contig132:51296..52933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig132.2633.1mRNA_H-canaliculatus_F_contig132.2633.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig132 51296..52933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig132.2633.1 ID=prot_H-canaliculatus_F_contig132.2633.1|Name=mRNA_H-canaliculatus_F_contig132.2633.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=300bp
MESLPSKMREADQHLDRLGGILRSLRAPPSEQVPTPTTLRRLKQGKPQKE
HQDPHQDRRKQFQQKQQQQQRRQEQEEHERQGQEQGCEQDERWFVRVSRS
SSLSSQSRSRRAPQYSQSETTTSPTIHCDRYRNHRQQHHCCVAAASPGGC
LINKPEIDFVPAEEQSDRLAHRRPVERAAVHDEAPTPKDQRAGDVDSDDP
PRAAAADAESVPPAHCTGVDTDASIAAAAVAGATSSIQEKVSSSSSSLSL
RRRVIRTWWRGLSSGVCFAAGAWAREGHGLFGAALALTAMVLVEFIDTS*
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