prot_H-canaliculatus_F_contig1318.2613.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1318.2613.1
Unique Nameprot_H-canaliculatus_F_contig1318.2613.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length100
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1318.2613.1 vs. uniprot
Match: D8LCN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN7_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 3.890e-33
Identity = 63/103 (61.17%), Postives = 76/103 (73.79%), Query Frame = 0 
Query:    1 MHRSVQTDINDDITITADVTTVYSGS--HVDAVSFITGGNSAACGVNFSIGDEYILSLYPAVGNPFDSTD--VTGLLTVGLCNLARLWSIVPADEKADLAAGC 99
            + +S QTDIN+D+T T  V  VYSG     D +SF+TGGNSA CGV+ +IG+EY+L LYPA  +PFDST     G LTVGLC+LAR+WS VP DEKADL AGC
Sbjct:   58 LSKSAQTDINEDVTFTVQVNAVYSGDVDGQDEISFVTGGNSAICGVDLTIGEEYLLGLYPAGDDPFDSTGGGTAGQLTVGLCDLARVWSDVPDDEKADLEAGC 160
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1318.2613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCN7_ECTSI3.890e-3361.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.120coord: 1..99
e-value: 6.8E-5
score: 25.0
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 11..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1318contigH-canaliculatus_F_contig1318:696..995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1318.2613.1mRNA_H-canaliculatus_F_contig1318.2613.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1318 278..2724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1318.2613.1 ID=prot_H-canaliculatus_F_contig1318.2613.1|Name=mRNA_H-canaliculatus_F_contig1318.2613.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=100bp
MHRSVQTDINDDITITADVTTVYSGSHVDAVSFITGGNSAACGVNFSIGD
EYILSLYPAVGNPFDSTDVTGLLTVGLCNLARLWSIVPADEKADLAAGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008993TIMP-like_OB-fold