mRNA_H-canaliculatus_F_contig1314.2590.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1314.2590.1
Unique NamemRNA_H-canaliculatus_F_contig1314.2590.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Match: D7FRY4_ECTSI (ThiC-associated domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRY4_ECTSI)

HSP 1 Score: 746 bits (1925), Expect = 1.200e-261
Identity = 365/392 (93.11%), Postives = 377/392 (96.17%), Query Frame = 1
Query:  154 MPLCKIAMAAAVYSGVGSEAFQGGFFARPLGKVGPAGVRVGSTPQMVASPPKVEQVEVAPGFKEPGSGQVKRTRDPYNPDFHEVASFGDAYPESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGADPRKGLPSVRGEWVKRREDSGDEVCTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQALEKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGSL 1329
            MPLCK+AMAAA+YS VGSEAFQGGFFA+ LGKVGP  VRV ST QMVASPPKVE VEVAPGF +PGSG+VKRT DPYNPDFHEVASFGDAYPESTK Y+E+VH ETGHKM+VPFRRIHLSDPDPGCSHLDVYDTAGP+GADPRKGLPSVRGEWVKRREDSGDEV TQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGA IRQTREWILRNSPIPVGTVPIYQALEKV GIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTA+RLTGIVSRGGSIHAKWCIAHHKENFAYEHWD+ILDICNKYDISLSIGDGLRPG +
Sbjct:    1 MPLCKVAMAAAIYSSVGSEAFQGGFFAKSLGKVGP--VRVRSTHQMVASPPKVEPVEVAPGFNKPGSGRVKRTTDPYNPDFHEVASFGDAYPESTKRYQEIVHAETGHKMKVPFRRIHLSDPDPGCSHLDVYDTAGPLGADPRKGLPSVRGEWVKRREDSGDEVFTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGAHIRQTREWILRNSPIPVGTVPIYQALEKVDGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTADRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDEILDICNKYDISLSIGDGLRPGCI 390          
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Match: A0A835Z789_9STRA (ThiC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z789_9STRA)

HSP 1 Score: 573 bits (1478), Expect = 4.500e-194
Identity = 285/403 (70.72%), Postives = 325/403 (80.65%), Query Frame = 1
Query:  127 MVRRSRADKMPLCKIAMAAAVYSGVGSEAFQGGFFARPLGKVGPAGVRVGSTPQMVASPPKVEQVEVAPGFK--EPGSGQVKRTRDPYNPDFHEVASFGDAYPESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGADPRKGLPSVRGEWVKRREDSGDEVCTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQALEKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGSL 1329
            MVRR      P  + A++AA+ +   +       F  P G    A ++ G +     +PP    + + P  K  EPGSG+VK T+DPYNP F   A FG AYP STKEY+EV+H ETG  +RVPFRRIHL+DPDPGCSH+DVYDT+GP+G DP+ GLP +R  WVKRRE+ GDE  TQMHYAK+GIITEEMAY AAREGMD EFVRSEV RGRAIIPSN+ H ELEPMIIGR+FKVK+NSNIGNSDVVSS+E EVEKL WSTLWGADTLMDLSTG  I+QTREWILRN+PIPVGTVP+YQALE+VGG+AEDLTWEV R+ LIEQAEQGVDYFTIHAGVLL FVPHTA+RLTGIVSRGGSIHAKW IAHHKENFAYEHW++ILDIC KYD+SLSIGDGLRPGS+
Sbjct:    1 MVRRQ-----PFARAAISAALCTSAANA------FVAPSGA---AKLQQGLSTSATRTPPSAVHMVMTPPEKIVEPGSGRVKPTKDPYNPQFRSAADFGVAYPSSTKEYQEVIHEETGTLLRVPFRRIHLTDPDPGCSHIDVYDTSGPLGYDPKYGLPKLREAWVKRREERGDERFTQMHYAKRGIITEEMAYVAAREGMDAEFVRSEVARGRAIIPSNRYHTELEPMIIGRMFKVKINSNIGNSDVVSSIEEEVEKLSWSTLWGADTLMDLSTGRHIKQTREWILRNAPIPVGTVPVYQALERVGGVAEDLTWEVFREVLIEQAEQGVDYFTIHAGVLLPFVPHTADRLTGIVSRGGSIHAKWNIAHHKENFAYEHWEEILDICAKYDVSLSIGDGLRPGSI 389          
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Match: A0A6T5LU33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5LU33_HETAK)

HSP 1 Score: 548 bits (1411), Expect = 3.180e-184
Identity = 258/320 (80.62%), Postives = 288/320 (90.00%), Query Frame = 1
Query:  370 TRDPYNPDFHEVASFGDAYPESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGADPRKGLPSVRGEWVKRREDSGDEVCTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQALEKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGSL 1329
            T+DP+NP+F E  SFG+AYP STKEYKEVVH ETG  +RVPFRRIHL+D DPGC HLDVYDT+GP G  PR+G+P +R EW+KRRE+ GDE  TQM+YAKKGI+TEEMAY AAREGMDPEFVRSEV RGRAII SNKRH+ELEP IIGR+FKVKVNSNIGNS VVSS+E EVEKLQWSTLWGADT+MDLSTG  I +TREWI+RNSPIPVGTVPIYQALEKV GIAEDLTWEV R+TLIEQAEQGVDY+TIHAGVLL FVP T NR+TGIVSRGGSIHAK C++HH+ENFAYEHWD+ILDICN+YDI+LSIGDGLRPGS+
Sbjct:   60 TKDPFNPEFRETTSFGEAYPSSTKEYKEVVHEETGALLRVPFRRIHLTDEDPGCGHLDVYDTSGPQGFSPREGIPKLREEWIKRREERGDERYTQMYYAKKGIVTEEMAYVAAREGMDPEFVRSEVARGRAIICSNKRHLELEPQIIGRMFKVKVNSNIGNSAVVSSIEEEVEKLQWSTLWGADTIMDLSTGKHIHETREWIVRNSPIPVGTVPIYQALEKVDGIAEDLTWEVFRETLIEQAEQGVDYWTIHAGVLLRFVPMTVNRMTGIVSRGGSIHAKHCLSHHRENFAYEHWDEILDICNQYDIALSIGDGLRPGSI 379          
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Match: A0A4D9D219_9STRA (ThiC-associated domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D219_9STRA)

HSP 1 Score: 523 bits (1348), Expect = 4.980e-175
Identity = 251/327 (76.76%), Postives = 278/327 (85.02%), Query Frame = 1
Query:  349 GSGQVKRTRDPYNPDFHEVASFGDAYPESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGADPRKGLPSVRGEWVKRREDSGDEVCTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQALEKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGSL 1329
            GSG+ K T+DPYNPDF    +F +AYP+ TKEY  V H  TG  M VPFRRIHL+D DPGC HLD+YDT+GP G +PR+GLP +R  WV RRE  GD   TQM YAK+GI+TEEMAY AAREGMDP+FV SEV RGRAIIPSNKRH+ELEPMI+GR FKVKVNSNIGNS V SS+E EVEKLQWSTLWGADTLMDLSTG  I QTREWI+RN+PIPVGTVPIYQALEKV GI E+LTWEV R+TLIEQAEQGVDYFTIHAGVLL ++P TA+R+TGIVSRGGSIHAK C+  HKENFAYEHWDDILDIC KYDISLSIGDGLRPGS+
Sbjct:   33 GSGRSKPTKDPYNPDFIRPLTFEEAYPKCTKEYIPVTHEGTGEVMSVPFRRIHLADTDPGCEHLDLYDTSGPQGVNPREGLPKLRKSWVGRREQKGDATPTQMWYAKQGIVTEEMAYVAAREGMDPQFVLSEVARGRAIIPSNKRHLELEPMIVGRNFKVKVNSNIGNSAVTSSIEEEVEKLQWSTLWGADTLMDLSTGKHIHQTREWIMRNAPIPVGTVPIYQALEKVDGIVENLTWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPMTASRMTGIVSRGGSIHAKLCLLDHKENFAYEHWDDILDICAKYDISLSIGDGLRPGSI 359          
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Match: A0A7S4VML7_9DINO (Hypothetical protein n=3 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VML7_9DINO)

HSP 1 Score: 515 bits (1326), Expect = 8.590e-171
Identity = 247/329 (75.08%), Postives = 276/329 (83.89%), Query Frame = 1
Query:  349 GSGQVKRTRDPYNPDFHEVASFGDAYPESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGADPRKGLPSVRGEWVKRRE--DSGDEVCTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQALEKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGSL 1329
            G+G+ K T DPYNP F +V  F +AYP S K Y+EV H  TG  ++VPFRRIHLSD DPGC HLDVYDT+GP+G  PR+GLP +R  WV  RE  D     CTQMHYAK+GI+TEEMA+ AAREGMDPEFVR+EV RGRAIIPSN++H E EPMIIGR FKVK+NSNIGNS V S++E EVEKLQWS LWGADTLMDLSTG  I +TREWI+RNSP+PVGTVPIYQALEKV GIAE+LTWEV R+TLIEQAEQGVDY+TIHAGVLL FVP TA RLTGIVSRGGSIHAK C++ H ENFAYEHWDDILDICNKYDISLSIGDGLRPG +
Sbjct:  101 GAGRTKPTSDPYNPQFRDVLQFQEAYPNSEKLYREVTHTPTGETLQVPFRRIHLSDEDPGCGHLDVYDTSGPLGVIPREGLPKLRKAWVAAREAADGPGARCTQMHYAKRGIVTEEMAFVAAREGMDPEFVRAEVARGRAIIPSNRKHPESEPMIIGRKFKVKINSNIGNSAVASNIEEEVEKLQWSALWGADTLMDLSTGRHIHETREWIVRNSPLPVGTVPIYQALEKVDGIAENLTWEVFRETLIEQAEQGVDYWTIHAGVLLRFVPLTAKRLTGIVSRGGSIHAKLCLSTHSENFAYEHWDDILDICNKYDISLSIGDGLRPGCI 429          
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Match: A0A1Q9EQ11_SYMMI (Phosphomethylpyrimidine synthase, chloroplastic n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EQ11_SYMMI)

HSP 1 Score: 509 bits (1311), Expect = 4.690e-169
Identity = 241/326 (73.93%), Postives = 278/326 (85.28%), Query Frame = 1
Query:  352 SGQVKRTRDPYNPDFHEVASFGDAYPESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGADPRKGLPSVRGEWVKRREDSGDEVCTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQALEKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGSL 1329
            SG+ + T DPYNP+F +   F +AYP S K YKEVV+  TG K+++PFRRIHL+D DPGC HLDVYDT+GP GADPRKGL  +R +W++ RE + D  CTQM+YAK+G+IT+EMA+ AAREGMDPEFVRSE+ RGRAIIP+N+ H E EPMIIGR FKVK+NSNIGNS V S++E EVEKLQWS+LWGADTLMDLSTG  I +TREWI+RNS +PVGTVPIYQALEKV GIAEDLTWE  R+TLIEQAEQGVDY+TIHAGVLL FVP TA RLTGIVSRGGSIHAK CI+ H+ENFAYEHWDDILDIC KYD+SLSIGDGLRPG +
Sbjct:   64 SGRSRPTSDPYNPEFKDAFQFKEAYPSSEKIYKEVVYEATGEKLKIPFRRIHLTDEDPGCDHLDVYDTSGPPGADPRKGLAKLRKKWIEGREVAEDGTCTQMYYAKQGVITQEMAFIAAREGMDPEFVRSELARGRAIIPANRNHPESEPMIIGRHFKVKINSNIGNSAVASNIEEEVEKLQWSSLWGADTLMDLSTGKHIHETREWIVRNSAMPVGTVPIYQALEKVDGIAEDLTWEKFRETLIEQAEQGVDYWTIHAGVLLRFVPLTAKRLTGIVSRGGSIHAKLCISKHEENFAYEHWDDILDICKKYDVSLSIGDGLRPGCI 389          
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Match: A0A1X6P9N3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9N3_PORUM)

HSP 1 Score: 508 bits (1307), Expect = 1.440e-168
Identity = 240/331 (72.51%), Postives = 274/331 (82.78%), Query Frame = 1
Query:  337 FKEPGSGQVKRTRDPYNPDFHEVASFGDAYPESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGADPRKGLPSVRGEWVKRREDSGDEVCTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQALEKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGSL 1329
              EP     + T DPYNP F  + +F   +P S K    VVH ETG ++ +P RR+HLS  +P    LD+YDT+GP G +PR+GLP VRG+W+ RRE  GD+V TQMHYAKKGI+TEEM YCA REG+DPEFVR+EV RGRAIIPSNKRH ELEPMI+GR FKVK+N+NIGNS V SS+E EVEKLQWST+WGADTLMDLSTG  I QTREWI+RNSP+PVGTVPIYQALEKVGGIAEDLTWE+ RDTLIEQAEQGVDYFTIHAGVLL FVP TANR+TGIVSRGG+IHAKWC+AHHKENFAYEHWD+I DI  KYD++ SIGDGLRPGS+
Sbjct:   50 LSEPVVRPSRPTEDPYNPAFRTIPTFEQCFPSSEKASTTVVHEETGSELVIPLRRVHLSGGEPA---LDLYDTSGPQGVNPRQGLPKVRGDWIARREARGDKVFTQMHYAKKGIVTEEMLYCAVREGLDPEFVRAEVARGRAIIPSNKRHPELEPMIVGRNFKVKINANIGNSAVTSSIEEEVEKLQWSTMWGADTLMDLSTGKHIHQTREWIIRNSPVPVGTVPIYQALEKVGGIAEDLTWELYRDTLIEQAEQGVDYFTIHAGVLLRFVPTTANRMTGIVSRGGAIHAKWCLAHHKENFAYEHWDEICDIMAKYDVAFSIGDGLRPGSI 377          
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Match: A0A5J4Z1I6_PORPP (Phosphomethylpyrimidine synthase, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1I6_PORPP)

HSP 1 Score: 504 bits (1297), Expect = 3.780e-167
Identity = 245/365 (67.12%), Postives = 284/365 (77.81%), Query Frame = 1
Query:  235 RPLGKVGPAGVRVGSTPQMVASPPKVEQVEVAPGFKEPGSGQVKRTRDPYNPDFHEVASFGDAYPESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGADPRKGLPSVRGEWVKRREDSGDEVCTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQALEKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGSL 1329
            RP  +  P G    S  +MV S P V Q           S   KR  DPYNP F  + S+   +P S+K Y +VVH  TG ++ +P RR+ L DPD    +LD+YDT+GP G +PR+GLP +R EW++RRE  GD+V TQMHYAKKG ITEEM Y A REG+DPEFVRSEV RGRAIIPSNK+H ELEPMI+GR FKVK+N+NIGNS V SS+E EVEKLQWST+WGADTLMDLSTG +I QTREWILRN P+PVGTVPIYQALEKV G+ EDLTWE+ R+TLIEQAEQGVDYFTIHAGVLL +VP TA R+TGIVSRGGSIHAKWC+AHHKENFAYEHWD+I +IC KYDI+ SIGDGLRPGS+
Sbjct:   29 RPGSRAAPHG---SSAVRMVLSDPSVSQ-----------SVSSKRKEDPYNPAFRTIPSYEQCFPNSSKNYTQVVHEPTGEELWIPCRRVQLEDPDK--PYLDIYDTSGPQGVNPREGLPKLRKEWIERREQRGDKVFTQMHYAKKGEITEEMLYVAVREGLDPEFVRSEVARGRAIIPSNKKHTELEPMIVGRNFKVKINANIGNSAVSSSIEEEVEKLQWSTMWGADTLMDLSTGKEIHQTREWILRNCPVPVGTVPIYQALEKVNGVPEDLTWEIFRETLIEQAEQGVDYFTIHAGVLLRYVPMTARRMTGIVSRGGSIHAKWCLAHHKENFAYEHWDEICEICAKYDIAFSIGDGLRPGSI 377          
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Match: A0A2K1J7Q6_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J7Q6_PHYPA)

HSP 1 Score: 505 bits (1300), Expect = 6.040e-167
Identity = 241/326 (73.93%), Postives = 275/326 (84.36%), Query Frame = 1
Query:  352 SGQVKRTRDPYNPDFHEVASFGDAYPESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGADPRKGLPSVRGEWVKRREDSGDEVCTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQALEKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGSL 1329
            +G+ + T+DP  PDF  + SF + +P STKE KEVVH  TG  ++VPFRRIHLS  DP   H D YDT+GP   +PR GLP +R EW+ RRE   DE  TQM+YAKKGIITEEMAYCAARE MDPEFVRSEV RGRAIIPSNK+H+ELEPMI+GR F VKVN+NIGNS V SS+E EV+KLQW+T+WGADT+MDLSTG  I +TREWI+RNS +PVGTVPIYQALEKV GIAE+LTWEV R+TLIEQAEQGVDYFTIHAGVLL F+P TA R+TGIVSRGGSIHAKWC+AHHKENFAY HWDDILDICN+YDI+LSIGDGLRPGS+
Sbjct:   82 AGRTRPTKDPAAPDFKPIPSFEECFPSSTKEIKEVVHEPTGSVLQVPFRRIHLSGDDP---HFDTYDTSGPQKVNPRYGLPKLRKEWIDRREALKDERFTQMYYAKKGIITEEMAYCAAREKMDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAVTSSIEEEVQKLQWATMWGADTIMDLSTGLHIHETREWIMRNSSVPVGTVPIYQALEKVDGIAENLTWEVFRETLIEQAEQGVDYFTIHAGVLLRFIPMTARRMTGIVSRGGSIHAKWCLAHHKENFAYTHWDDILDICNQYDIALSIGDGLRPGSI 404          
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Match: A0A7S2VR37_9DINO (Hypothetical protein n=2 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VR37_9DINO)

HSP 1 Score: 504 bits (1298), Expect = 6.580e-167
Identity = 240/324 (74.07%), Postives = 272/324 (83.95%), Query Frame = 1
Query:  364 KRTRDPYNPDFHEVASFGDAYPESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGADPRKGLPSVRGEWVKRREDSGDEV--CTQMHYAKKGIITEEMAYCAAREGMDPEFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVEAEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQALEKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTGIVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGSL 1329
            K T DPYNP F ++  F +AYP S K YK+V +  TG  +R+PFRRIHLSD DPGC HLDVYDT+GP+  DPR+GLP +R  W+  RE    E   CTQMHYAK+G++T+EMA+ AAREGMDPEFVRSEV RGRAIIPSN++H E EPMIIGR FKVK+NSNIGNS V S++E EVEKLQWS LWGADTLMDLSTG  I +TREWI+RNSP+PVGTVPIYQALEKV GIAE+LTW+V R+TLIEQAEQGVDY+TIHAGVLL FVP TA RLTGIVSRGGSIHAK C++ H ENFAYEHWDDILDICNKYDISLSIGDGLRPG +
Sbjct:   81 KPTSDPYNPQFKDMLQFKEAYPGSEKLYKDVTYEPTGETLRIPFRRIHLSDEDPGCGHLDVYDTSGPLNVDPRQGLPKLRAPWIAAREAEFGEGHRCTQMHYAKQGVVTQEMAFIAAREGMDPEFVRSEVARGRAIIPSNRKHPESEPMIIGRKFKVKINSNIGNSAVASNIEEEVEKLQWSALWGADTLMDLSTGKHIHETREWIVRNSPLPVGTVPIYQALEKVDGIAENLTWDVFRETLIEQAEQGVDYWTIHAGVLLRFVPLTAKRLTGIVSRGGSIHAKLCLSSHTENFAYEHWDDILDICNKYDISLSIGDGLRPGCI 404          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1314.2590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRY4_ECTSI1.200e-26193.11ThiC-associated domain-containing protein n=2 Tax=... [more]
A0A835Z789_9STRA4.500e-19470.72ThiC family-domain-containing protein n=1 Tax=Trib... [more]
A0A6T5LU33_HETAK3.180e-18480.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D219_9STRA4.980e-17576.76ThiC-associated domain-containing protein n=2 Tax=... [more]
A0A7S4VML7_9DINO8.590e-17175.08Hypothetical protein n=3 Tax=Alexandrium monilatum... [more]
A0A1Q9EQ11_SYMMI4.690e-16973.93Phosphomethylpyrimidine synthase, chloroplastic n=... [more]
A0A1X6P9N3_PORUM1.440e-16872.51Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z1I6_PORPP3.780e-16767.12Phosphomethylpyrimidine synthase, chloroplastic n=... [more]
A0A2K1J7Q6_PHYPA6.040e-16773.93Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A7S2VR37_9DINO6.580e-16774.07Hypothetical protein n=2 Tax=Brandtodinium nutricu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1314contigH-canaliculatus_F_contig1314:21225..26114 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score746.1
Seed ortholog evalue8.6e-213
Seed eggNOG ortholog2880.D7FRY4
KEGG rclassRC03251,RC03252
KEGG koko:K03147
KEGG ReactionR03472
KEGG Pathwayko00730,ko01100,map00730,map01100
KEGG ModuleM00127
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0007584,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010266,GO:0014070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017144,GO:0018130,GO:0019144,GO:0019438,GO:0019904,GO:0031667,GO:0033273,GO:0034641,GO:0042221,GO:0042364,GO:0042493,GO:0042723,GO:0042724,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048037,GO:0050896,GO:0051536,GO:0051540,GO:0071704,GO:0072527,GO:0072528,GO:0080041,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901698
EggNOG free text desc.ADP-ribose pyrophosphohydrolase activity
EggNOG OGs2QRQ4@2759,COG0422@1
EC4.1.99.17
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionThiC-associated domain protein
Ec32 orthologEc-03_003600.1
Exons7
Model size2223
Cds size1227
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929052.4209821-UTR-H-canaliculatus_F_contig1314:21224..213351622929052.4209821-UTR-H-canaliculatus_F_contig1314:21224..21335Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1314 21225..21335 +
1696845661.3430736-UTR-H-canaliculatus_F_contig1314:21224..213351696845661.3430736-UTR-H-canaliculatus_F_contig1314:21224..21335Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1314 21225..21335 +
1622929052.4371743-UTR-H-canaliculatus_F_contig1314:21591..216061622929052.4371743-UTR-H-canaliculatus_F_contig1314:21591..21606Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1314 21592..21606 +
1696845661.3594527-UTR-H-canaliculatus_F_contig1314:21591..216061696845661.3594527-UTR-H-canaliculatus_F_contig1314:21591..21606Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1314 21592..21606 +
1622929052.5542629-UTR-H-canaliculatus_F_contig1314:25244..261141622929052.5542629-UTR-H-canaliculatus_F_contig1314:25244..26114Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1314 25245..26114 +
1696845661.4184844-UTR-H-canaliculatus_F_contig1314:25244..261141696845661.4184844-UTR-H-canaliculatus_F_contig1314:25244..26114Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1314 25245..26114 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929052.4529016-CDS-H-canaliculatus_F_contig1314:21606..222171622929052.4529016-CDS-H-canaliculatus_F_contig1314:21606..22217Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 21607..22217 +
1696845661.367734-CDS-H-canaliculatus_F_contig1314:21606..222171696845661.367734-CDS-H-canaliculatus_F_contig1314:21606..22217Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 21607..22217 +
1622929052.4813957-CDS-H-canaliculatus_F_contig1314:22554..226421622929052.4813957-CDS-H-canaliculatus_F_contig1314:22554..22642Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 22555..22642 +
1696845661.375822-CDS-H-canaliculatus_F_contig1314:22554..226421696845661.375822-CDS-H-canaliculatus_F_contig1314:22554..22642Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 22555..22642 +
1622929052.498763-CDS-H-canaliculatus_F_contig1314:23162..233691622929052.498763-CDS-H-canaliculatus_F_contig1314:23162..23369Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 23163..23369 +
1696845661.3838894-CDS-H-canaliculatus_F_contig1314:23162..233691696845661.3838894-CDS-H-canaliculatus_F_contig1314:23162..23369Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 23163..23369 +
1622929052.514153-CDS-H-canaliculatus_F_contig1314:24700..249211622929052.514153-CDS-H-canaliculatus_F_contig1314:24700..24921Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 24701..24921 +
1696845661.3919187-CDS-H-canaliculatus_F_contig1314:24700..249211696845661.3919187-CDS-H-canaliculatus_F_contig1314:24700..24921Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 24701..24921 +
1622929052.5296202-CDS-H-canaliculatus_F_contig1314:25113..251821622929052.5296202-CDS-H-canaliculatus_F_contig1314:25113..25182Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 25114..25182 +
1696845661.399967-CDS-H-canaliculatus_F_contig1314:25113..251821696845661.399967-CDS-H-canaliculatus_F_contig1314:25113..25182Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 25114..25182 +
1622929052.543089-CDS-H-canaliculatus_F_contig1314:25213..252441622929052.543089-CDS-H-canaliculatus_F_contig1314:25213..25244Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 25214..25244 +
1696845661.4080217-CDS-H-canaliculatus_F_contig1314:25213..252441696845661.4080217-CDS-H-canaliculatus_F_contig1314:25213..25244Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1314 25214..25244 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1314.2590.1prot_H-canaliculatus_F_contig1314.2590.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1314 21607..25244 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1314.2590.1

>prot_H-canaliculatus_F_contig1314.2590.1 ID=prot_H-canaliculatus_F_contig1314.2590.1|Name=mRNA_H-canaliculatus_F_contig1314.2590.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=409bp
MVRRSRADKMPLCKIAMAAAVYSGVGSEAFQGGFFARPLGKVGPAGVRVG
STPQMVASPPKVEQVEVAPGFKEPGSGQVKRTRDPYNPDFHEVASFGDAY
PESTKEYKEVVHPETGHKMRVPFRRIHLSDPDPGCSHLDVYDTAGPMGAD
PRKGLPSVRGEWVKRREDSGDEVCTQMHYAKKGIITEEMAYCAAREGMDP
EFVRSEVERGRAIIPSNKRHVELEPMIIGRLFKVKVNSNIGNSDVVSSVE
AEVEKLQWSTLWGADTLMDLSTGADIRQTREWILRNSPIPVGTVPIYQAL
EKVGGIAEDLTWEVLRDTLIEQAEQGVDYFTIHAGVLLSFVPHTANRLTG
IVSRGGSIHAKWCIAHHKENFAYEHWDDILDICNKYDISLSIGDGLRPGS
LNSRSRVN*
back to top

mRNA from alignment at H-canaliculatus_F_contig1314:21225..26114+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1314.2590.1 ID=mRNA_H-canaliculatus_F_contig1314.2590.1|Name=mRNA_H-canaliculatus_F_contig1314.2590.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4890bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1314:21225..26114+ (Hapterophycus canaliculatus Oshoro5f female)
GTGCAGTTTCGCCACACAACGCGTACAGAGGGCCAAGATTCACGACTCAA GTGGGCTTTCCCGTGATAACTGTAGCAGTCACTTCAAGGATCGCGTGATC GTTGTGTCGAGGTAAACGTCCACATGAAGCCTTCCCTCACACATGTTTCC TTCCAAAGGTAAAACTGCTTTACCTACGTGGCCGGAGGATGGGCATGAGC CCCTGGTTGCCACGCCACACGGCTAATGTTACGCAGTGCCCTGTTGTGCA CTCTCTTGAGTATTGATTCATGGATACGTCGGTCTATTCGATCCTCATAA GTGGCTGACGTGCACATGACACCAGTCTTATCTGTGCTCTGCGCCGTTCG TTGTTGTATTGAAGCAGCGTCAAGGAATTGACATGGTGCGTAGATCGCGC GCAGACAAGATGCCTCTCTGCAAGATTGCGATGGCAGCAGCAGTCTACAG CGGGGTCGGATCAGAGGCCTTTCAAGGTGGCTTCTTCGCCCGTCCGCTAG GCAAGGTGGGACCGGCAGGCGTACGTGTTGGCTCAACCCCTCAAATGGTC GCGTCGCCGCCCAAGGTCGAGCAGGTTGAGGTTGCCCCTGGCTTCAAAGA GCCCGGAAGCGGGCAGGTGAAGCGCACTCGCGACCCGTACAACCCGGACT TCCATGAGGTGGCTTCCTTCGGAGACGCCTACCCCGAATCTACTAAGGAG TACAAGGAGGTCGTGCATCCTGAGACGGGCCACAAGATGCGGGTGCCATT CCGTCGAATCCACCTCTCCGACCCTGACCCGGGGTGCTCACACCTGGATG TATATGATACCGCCGGCCCAATGGGAGCGGATCCCAGGAAGGGCCTCCCT AGCGTGCGAGGAGAATGGGTCAAACGGCGGGAGGACTCCGGCGACGAAGT GTGCACGCAGATGCACTACGCGAAGAAGGGGATAATCACGGAAGAGATGG CATACTGTGCTGCTCGGGAGGGGATGGACCCCGAGTTTGTCAGGTTAGAG ACCAATTTTTTGTGTGGAAAACCCCCGCAGCTTTCATGTCTCTTGGTTTT GGAGCGCCCAAGGATGACACGCACATCGCTCATCTTCGCACACCGCACCA CAGAGAGGATGTTCACGTTTCGCTTGTTACTCTATTTGGTCGTGTAGATG TTTCATTGAGTTCTTCCAAGCAACACCCTGTAGAATCGCATCCGTGTGTA CACTCGAACGGGATTTTCTGGCTGTCCGTCTGCTGTTAGGACGTTAGGAC CAGGTTGTCAGACCACACACCGGCAACAGATGCAGTAGGTTTTAATGAAG TCTCCCTCTACCGCCGTCTCTTGTTCGAAGATCGGAAGTGGAGCGGGGCC GGGCAATCATCCCTTCCAACAAACGTCACGTCGAGCTCGAGCCAATGATA ATCGGACGCCTCTTTAAGGTGCGCTGGTGTTGCTTCTCCGAGTGTTGGCC CTTATCTTCATGTTCATGAAAACAGTCACCGGTACTTGTGCTACCTGAAG AAGCCTTGTCTGCTGGTAGTTCCGATGGCTAAAGTTCCTGCCTTCTGTCC ATGAGGGTGTGAGGTCATTTCTGCCCTGTTGCTATTGCCTGATACTCATT ATGCGAGTTAGAAAGCAAGCCATTATTTTCGCGTAAAAGGTGCTCCGTCA AGGTGTCGCGACCTGCGTCTTATGCAGTCAGATATCCTTGGACGAAAGTA CGAAAAGGGTTTTTCGTGTAACCAGACAGGCGAAATTCGACCGTTCGGGA TTTCCTGACCTCTGTGGAAGAGCGTCCCGGAACAAGATTGGGACTGCCTT GCGGGTTGGGTGTGTTGCCAGAAGCTATCTTCAGATTGTGCACATGCCTT TCAATCGTCAGATCCAACGCGACAGCTGTTGCTCTTTGACTGGGTTTAAA GGAATCCTGTTGCTCTTCTTACCTTCTTATTCGTGCAGGTTAAGGTGAAC AGCAACATCGGAAACTCAGATGTGGTAAGCAGCGTGGAAGCGGAGGTAGA GAAGTTGCAATGGTCCACCCTCTGGGGTGCGGACACCCTGATGGATCTAT CAACAGGGGCAGACATCAGACAGACTCGCGAGTGGATTCTACGGAACTCT CCCATCCCCGTGGGAACCGTCCCCATCTACCAAGCCCTGGAAAAGGTATG CTTTCTATTTCCATAGAACGGTAATAACTTTACTACCGTCTCACGAGAAT TATATGACTCCCGCCGACTTTCGAACCCTGGATATGAATTCTAACAAACA GAACCCGTAAATACATCCAGTAGTACAGTTTACTTTCATCACAGCTCCCA GGAGACATGGGACTAAAACTTTTTTTAAATGCAATGTAATTGTAATTAAA AGGTTCATACAATTCGCCATCACAGGTGAGTGAGCGGAATGTTTAATTTA TATCAGTTCTCTTGTTTTTTGTGCCGATGGAAATACGGTGGGTCTGGAGG TTACGTGGAACGGCAGTGAGTTTACAACAGTCCCCTGAGCAAAATACAGG TCTTTCCCAGTGTGGAAGTAAACCGCTGACGTTTTTGTAATCTCGATTGT ACTCTACCGCTGTATCCTTCCTGCCGCAACGTTGCTGTGGCGAAAGTGCA AATTGAAAGAAATGATACGCAGATATTTCACTTCGTCAAATTGTGGGCGA AAAGCTTCGGTGATGTACACCAGTTCACGTTGTTACTTCGAAATACGGTG AAAGGCGGCTACAACGCAAATTGTTACAAGCCTTGCTATTTAACATGTAT ACGCCGAACCACATTCGCAGGTTGTCATAATCACTGCGTGTTGAATCATG CGTCGCACAACGAGTTCAGTGGCTTGGGCGCGACGTTCGTTCATCATATG TCAAATCTGCAGTTGTTCAGGATGATTTGTTCGTTGACATTGACAAGCAT GATGAAGCGAAAATCGCATCCCACGTGCAGACACGACAGCGAGCGTTTTT ACCGACCCAAGGGAATTCTTTGATATTATCCGCTGAGAAGTGGTTGTTCC TCTATCCTTGACACTGGCCAAGGATATATTTTTGATTCCACCGCCAAACT CGATGCCGATGTCTGGATCGTGGTCACTACATTTAGCCTCACGAAAGCTC GTGGTGCAATGTTGCGTCTTTTAAACGTGAACCGGGTCGTGCAAACACGT AGTAGAGCCATAACCCGTGAATCATTGTCGATACTCACCTCCGTGGTTGA GTAGACTTACCGGCTAACTTCCTCGGTGGCGCACCAAGTTGGATTCCGCC AAACTATGGGCTTGTTTTCAGCGATCCTCCGCGGGAATTCCGAAGAAATG ACTTTGCGTTGTGTTTTCTGTTGGAATGACGTGCCAGCCAGCGCCTAAAA GAGGAGCCAATAGGAATCAGTCAGCACCCATAAAAAAACACGCTTGCATG AGCGGAGATAAATCGTTATGCCCAACTCCCACTGCAGCATGCTGTATCTA CCTTTCGTATTATCGCGGCGGTACAGGTTGGCGGGATCGCTGAGGACCTC ACGTGGGAAGTCCTCCGCGACACGCTCATTGAGCAAGCCGAGCAGGGGGT GGACTACTTCACGATCCACGCAGGGGTTTTGCTGTCGTTCGTCCCGCATA CCGCAAACCGCTTGACGGGAATTGTCAGCCGAGGTGGTTCCATTCACGCT AAGTGGTGCATTGCTCACCACAAGGAGAACTTTGCGTACGAGCATTGGTG AGTCGTGTGCGTTCACGGTAGCATGGGGTTGCTGTTTGTTTCAAGTTTGG TTCGTTTCAGTCAATCATCTGAAGCCCTGAGTGACCTTACATTTACGTGC GGTTCTGTAGAAAAGTTGATACCGTGAAACATCATTACATTGTCAGCGCT TGCCGTGCAATGCCGGCCTGTTTCATGTTATTCTCGCAGGGACGACATAC TCGACATTTGCAACAAGTATGACATCTCTCTGTCTATTGGAGACGGCCTA CGCCCTGGGTGCATCAAGGACGCCAATGACTTCGCTCAGTTCGCTGAACT CAAGGTCCAGGGTGAACTGACGTCGCGAGCGTGGGCCAAAGATGTTCAGG TGCGCTTCTGGGGTGCGTTTTAAAATATTCTGTATGGCGCATCTGGTTGT ATCCAGCTTTGATATTCGTGTAATATATTGTGTGTTTATGCTGTCCATAA CCCCTCCAATGTTGTTGTCTTGTCGCAAGAAGCCGTGTTGACTTATCATG ACAAGAACCCGTGTTGACTTATCATGACAGGAGATGTGGTCACAAGTGTT CGTACTATCATGCTGCTCCGCGCGATGTCGAATGCTCGGCCGTGTGCCGT GGGAGTAGGTATACCCTGTGTGGGTCTGAATCTCTCTCCCTGTTGTGTCG CTTTCGTTAGAGTTTTTTTTTCTCGATGATTTTCAGTTGCTTTGTTCGGG GAGCAACCTTGTTTTGTAGGGAATGTGAAGGCATTTTTTTCACGAGCCGA GCGAGCGGCGAAGCCGCGAGCCTTTTTTTCTTTTTCCCCCTTCGATTCCT GAAAAAAGAAAGGTTCTGTATACAAGCCATTGTTCCGGTCCCGCGTGTAG GGTGCGCCCAACTCGATTTGAAGTGGTCGTCAAAAACATAACTTTTGGGG GGGAGAGCAAGACCTACAGAGGACCAAATATCGATCTGCTGGCTTCTGAG AGGAAAGAAAAGTACGGTATAGTGCATCAACCTAGTATGCCGGTGCTCTG ACAACACATGGCCGCGCTCAACAGGTTTTGTCAATTATTTGGCCGTCTCT CCGGGGTTCGAAACATACACACCAAGGGATTTCTGTTTCATCAGCAGCAC AGCAACTTAGCATCCATAGAATGGCCGACAAAGCAAGCAGGCAGGCCCAC AGGTATATCACGGTAGGGTAGGGGCGCGAGGTTTCCGGAG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1314:21225..26114+

>mRNA_H-canaliculatus_F_contig1314.2590.1 ID=mRNA_H-canaliculatus_F_contig1314.2590.1|Name=mRNA_H-canaliculatus_F_contig1314.2590.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2454bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1314:21225..26114+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGTGCGTAGATCGCGCGCAGACAAGATGCCTCTCTGCAAGATTGCGAT
GGCAGCAGCAGTCTACAGCGGGGTCGGATCAGAGGCCTTTCAAGGTGGCT
TCTTCGCCCGTCCGCTAGGCAAGGTGGGACCGGCAGGCGTACGTGTTGGC
TCAACCCCTCAAATGGTCGCGTCGCCGCCCAAGGTCGAGCAGGTTGAGGT
TGCCCCTGGCTTCAAAGAGCCCGGAAGCGGGCAGGTGAAGCGCACTCGCG
ACCCGTACAACCCGGACTTCCATGAGGTGGCTTCCTTCGGAGACGCCTAC
CCCGAATCTACTAAGGAGTACAAGGAGGTCGTGCATCCTGAGACGGGCCA
CAAGATGCGGGTGCCATTCCGTCGAATCCACCTCTCCGACCCTGACCCGG
GGTGCTCACACCTGGATGTATATGATACCGCCGGCCCAATGGGAGCGGAT
CCCAGGAAGGGCCTCCCTAGCGTGCGAGGAGAATGGGTCAAACGGCGGGA
GGACTCCGGCGACGAAGTGTGCACGCAGATGCACTACGCGAAGAAGGGGA
TAATCACGGAAGAGATGGCATACTGTGCTGCTCGGGAGGGGATGGACCCC
GAGTTTGTCAGATGGTGCGTAGATCGCGCGCAGACAAGATGCCTCTCTGC
AAGATTGCGATGGCAGCAGCAGTCTACAGCGGGGTCGGATCAGAGGCCTT
TCAAGGTGGCTTCTTCGCCCGTCCGCTAGGCAAGGTGGGACCGGCAGGCG
TACGTGTTGGCTCAACCCCTCAAATGGTCGCGTCGCCGCCCAAGGTCGAG
CAGGTTGAGGTTGCCCCTGGCTTCAAAGAGCCCGGAAGCGGGCAGGTGAA
GCGCACTCGCGACCCGTACAACCCGGACTTCCATGAGGTGGCTTCCTTCG
GAGACGCCTACCCCGAATCTACTAAGGAGTACAAGGAGGTCGTGCATCCT
GAGACGGGCCACAAGATGCGGGTGCCATTCCGTCGAATCCACCTCTCCGA
CCCTGACCCGGGGTGCTCACACCTGGATGTATATGATACCGCCGGCCCAA
TGGGAGCGGATCCCAGGAAGGGCCTCCCTAGCGTGCGAGGAGAATGGGTC
AAACGGCGGGAGGACTCCGGCGACGAAGTGTGCACGCAGATGCACTACGC
GAAGAAGGGGATAATCACGGAAGAGATGGCATACTGTGCTGCTCGGGAGG
GGATGGACCCCGAGTTTGTCAGATCGGAAGTGGAGCGGGGCCGGGCAATC
ATCCCTTCCAACAAACGTCACGTCGAGCTCGAGCCAATGATAATCGGACG
CCTCTTTAAGATCGGAAGTGGAGCGGGGCCGGGCAATCATCCCTTCCAAC
AAACGTCACGTCGAGCTCGAGCCAATGATAATCGGACGCCTCTTTAAGGT
TAAGGTGAACAGCAACATCGGAAACTCAGATGTGGTAAGCAGCGTGGAAG
CGGAGGTAGAGAAGTTGCAATGGTCCACCCTCTGGGGTGCGGACACCCTG
ATGGATCTATCAACAGGGGCAGACATCAGACAGACTCGCGAGTGGATTCT
ACGGAACTCTCCCATCCCCGTGGGAACCGTCCCCATCTACCAAGCCCTGG
AAAAGGTTAAGGTGAACAGCAACATCGGAAACTCAGATGTGGTAAGCAGC
GTGGAAGCGGAGGTAGAGAAGTTGCAATGGTCCACCCTCTGGGGTGCGGA
CACCCTGATGGATCTATCAACAGGGGCAGACATCAGACAGACTCGCGAGT
GGATTCTACGGAACTCTCCCATCCCCGTGGGAACCGTCCCCATCTACCAA
GCCCTGGAAAAGGTTGGCGGGATCGCTGAGGACCTCACGTGGGAAGTCCT
CCGCGACACGCTCATTGAGCAAGCCGAGCAGGGGGTGGACTACTTCACGA
TCCACGCAGGGGTTTTGCTGTCGTTCGTCCCGCATACCGCAAACCGCTTG
ACGGGAATTGTCAGCCGAGGTGGTTCCATTCACGCTAAGTGGTGCATTGC
TCACCACAAGGAGAACTTTGCGTACGAGCATTGGTTGGCGGGATCGCTGA
GGACCTCACGTGGGAAGTCCTCCGCGACACGCTCATTGAGCAAGCCGAGC
AGGGGGTGGACTACTTCACGATCCACGCAGGGGTTTTGCTGTCGTTCGTC
CCGCATACCGCAAACCGCTTGACGGGAATTGTCAGCCGAGGTGGTTCCAT
TCACGCTAAGTGGTGCATTGCTCACCACAAGGAGAACTTTGCGTACGAGC
ATTGGGACGACATACTCGACATTTGCAACAAGTATGACATCTCTCTGTCT
ATTGGAGACGGCCTACGCCCTGGGGACGACATACTCGACATTTGCAACAA
GTATGACATCTCTCTGTCTATTGGAGACGGCCTACGCCCTGGTTCGCTGA
ACTCAAGGTCCAGGGTGAACTGATTCGCTGAACTCAAGGTCCAGGGTGAA
CTGA
back to top