prot_H-canaliculatus_F_contig131.2555.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig131.2555.1
Unique Nameprot_H-canaliculatus_F_contig131.2555.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length997
Homology
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Match: A0A6H5JE11_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE11_9PHAE)

HSP 1 Score: 555 bits (1430), Expect = 3.060e-181
Identity = 434/832 (52.16%), Postives = 494/832 (59.38%), Query Frame = 0
Query:  196 VTSMRPLVPAARGLGLPSLASQTMSARVLSEDTRGALSFSPSSTPL-GLGMGDTYRRRI---SSRNSSSLQQNDQHPLPGYALRLPARQARSEGGRASVRRLAGGGRDSWRAPAVAYNAVERRTGRDTTALRAVSARLDAAATAIDAVEIGVRSASDSLDSLLQLLESRPGHSV--TPRAAVGNRGSSLEMRSPAPGMVPE------ESHDSSDSQGAAREVEPAATSSVAQGTAVVSPGGPRISTASSSMAWEVLEDSSGEPSSDDTITSVSTPQTVVREGRANA-GRTASGRAREGGGGSRAANMLRGELAAGSVLPHSQREAEEQAESDEYV----ACAQTTSVGIRDAIIEESKGEPSTMVDGT--LTRTLSPRRPLSSSVGRDIVEELPSSRITEGRESSRRHGFGSLTNSRRYGGRADESTSTTRVGSRTLSGSGTSEDATVGSEVSALP----------GDAESTSNDGPRSSQATEERRSPPRGLVTADSAVILIENEVNREADSDPSDVSLPVRELEAAMDGIDTERGRLIIEIARLRGQQNQSLVHLQRLQNEQFVVRQRQVSTLSDIVNSFGRTVAAAGALPHGENSSLGRISSDVVSTLRRMLRLLSATVPAAIAA--SPSSSTVDSLPLPTTASTSPDMLASPRSSSPYPVTDAGESSAAHGAIGTLSVGGQLALRPTGVDLTQEVIDAALQALPRLAAAATAISGARRMQGYLAGLTG----DAEGRSSG-TGRSCSTETIAALPDAPSSTWDGVGEVDGG--RGCVICLSEGSTPAQSLCSLPCEHVFHRVCVGKWLRMQDSCPTCRRQVSAVENGS 989
            ++S RP+VP ARGL L SL  +T+SAR          S S   TPL G G+ DT R R    S       QQ+ Q+    Y LR+P R  RS+GGRAS+RRLAGGGRD+WR   VAY+AV R TGRDTTALRAVSARLDAA+TAIDAVEIGVRSASDSLDSLLQLLESR G +V  T  ++      + E  S  PG           +  SSDSQ +A  +      S+    + VSP    + T+S  M       SS E   D+   S   PQ +     AN  G     R  EGGGGSRAA MLR E  AG     +    E    S   +      AQ  SV   D  I+E+  E ST       LT  L+  RP+SS   +++VEE+ SSR T  RE+S  HG G                     GS T  G     D  +G  + A P           D  ++ N  PRS +    RR+ PRG+    S       E      S   +V+LPVREL    +GIDTERGRLI+EIARLRGQQNQSLVHL RLQ+EQFVVRQRQVSTLSDIVNSFGRTVAAA ALPHGE+SSLGRISSDVVSTLRRMLRLLSATVPAA AA  +P +S     P+ TT S+  D    P  ++P P T   E   A G+ GT SVGG++ALRP GVDLTQEVIDAALQALPRLAAAATAISGA RMQGYLA L G    D  GR S  TGR CS ETIAALPDA       VGEVDGG  RGCVICLSE  T  Q LC LPC HVFHRVCVGKWL MQDSCPTCRRQV  VE GS
Sbjct:    1 MSSTRPVVPTARGLELQSLIPRTLSARA---------STSSLFTPLPGAGLADTPRSRSPPSSXXXXXXXQQDRQNHPTAYPLRVPNRHGRSDGGRASIRRLAGGGRDAWRTAPVAYSAVVRGTGRDTTALRAVSARLDAASTAIDAVEIGVRSASDSLDSLLQLLESRHGPAVSQTSLSSTSAEVDAFENGSADPGPSSRGIGEGGRAAASSDSQASAGAM------SMRSPRSSVSPPAVSLPTSSGLMVGA----SSSESPRDEFNVSTPPPQPMGPPRYANRDGAPIVARVPEGGGGSRAAIMLRREQQAGLTAFSNPEAGEHLCRSPAVLPRQDGGAQEGSVATGDTSIDETNEEHSTRTRSGQHLTSALALPRPVSSPAVQELVEEVNSSRRTAERETSESHGVG-------------------MAGSATA-GQHLPADIGIGGTMEAAPTDLAALRMLGSDRTTSLNSVPRSVREAGSRRASPRGMEGTGSGAASSTRETYAGETSGRGNVALPVREL----NGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAAALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQLAPGNS-----PVLTTTSSVSDGTPPPAPNTPRP-TAVREGQVASGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGGTSDTVGRGSDYTGRCCSKETIAALPDASQPVEGAVGEVDGGDVRGCVICLSENDTAGQHLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGS 783          
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Match: D7FQ33_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ33_ECTSI)

HSP 1 Score: 443 bits (1139), Expect = 3.660e-141
Identity = 315/562 (56.05%), Postives = 351/562 (62.46%), Query Frame = 0
Query:  454 SVSTP--QTVVREGRANA-GRTASGRAREGGGGSRAANMLRGELAAGSVLPHSQREAEEQAESDEYV----ACAQTTSVGIRDAIIEESKGEPSTMVDGT--LTRTLSPRRPLSSSVGRDIVEELPSSRITEGRESSRRHGFGSLTNSRRYGGRADESTSTTRVGSRTLSGSGTSEDATVGSEVSALPGDAES----------TSNDGPRSSQATEERRSPPRGLVTADSAVILIENEVNREADSDPSDVSLPVRELEAAMDGIDTERGRLIIEIARLRGQQNQSLVHLQRLQNEQFVVRQRQVSTLSDIVNSFGRTVAAAGALPHGENSSLGRISSDVVSTLRRMLRLLSATVPAAIAASPSSSTVDSLPLPTTASTSPDMLASPRSSSPYPVTDAGESSAAHGAIGTLSVGGQLALRPTGVDLTQEVIDAALQALPRLAAAATAISGARRMQGYLAGLTG----DAEGRSSG-TGRSCSTETIAALPDAPSSTWDGVGEVDGG--RGCVICLSEGSTPAQSLCSLPCEHVFHRVCVGKWLRMQDSCPTCRRQVSAVENGS 989
            SVSTP  Q +   G AN  G     R  EGGGGSRAA+MLR E  AG     +    E    S   +      AQ +SV   DA I+E+  E ST       LT  L+  RP+SS   +++VEE+ SSR T  RE+S  HG G                     GS T  G     D  +G  + A P D  +          + + GPR  +    RR+ PRG+    S       E N    S   D++LPVRELEAAM+GIDTERGRLI+EIARLRGQQNQSLVHL RLQ+EQFVVRQRQVSTLSDIVNSFGRTVAAAGALPHGE+SSLGRISSDVVSTLRRMLRLLSATVPAA AA    S   + P+ TT S+ PD    P  ++P P     E  AA G+ GT SVGG++ALRP GVDLTQEVIDAALQALPRLAAAATAISGA RMQGYLA L G    D  GR S  TGR CS ETIAALPDA       VGEVDGG  RGCVICLSE  T  Q LC LPC HVFHRVCVGKWL MQDSCPTCRRQV  VE GS
Sbjct:   14 SVSTPPSQPIGPPGHANRDGAPIVARVPEGGGGSRAASMLRREQQAGLTTFSNPEAGEHLCRSTAVLPRQDGGAQESSVATGDASIDETNEEHSTRTRSGQHLTSALALPRPVSSPAAQELVEEVNSSRRTAERETSESHGVG-------------------MAGSATA-GQHLPADIDIGGTMEAAPTDLAALRTLGSDRTPSLDSGPRLVREAGSRRASPRGMEGTGSGAASSTREANAGETSGRGDMALPVRELEAAMNGIDTERGRLILEIARLRGQQNQSLVHLHRLQHEQFVVRQRQVSTLSDIVNSFGRTVAAAGALPHGEDSSLGRISSDVVSTLRRMLRLLSATVPAATAAQ---SAPGNSPVLTTTSSVPDGAPPPAPNAPRPAA-VREGQAASGSAGTYSVGGRVALRPAGVDLTQEVIDAALQALPRLAAAATAISGASRMQGYLADLAGGEASDTAGRRSDYTGRCCSKETIAALPDASQPVEGAVGEVDGGGVRGCVICLSENDTAGQHLCRLPCNHVFHRVCVGKWLSMQDSCPTCRRQVPNVEIGS 551          
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Match: A0A830CTD3_9LAMI (E3 ubiquitin-protein ligase sgr9 amyloplastic n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CTD3_9LAMI)

HSP 1 Score: 65.9 bits (159), Expect = 7.210e-8
Identity = 35/92 (38.04%), Postives = 48/92 (52.17%), Query Frame = 0
Query:  891 LAGLTGDAEGRSSGTGRSCSTETIAALPDAPSSTWDGVGEVDGGRGCVICLSEGSTPAQSLCSLPCEHVFHRVCVGKWLRMQDSCPTCRRQV 982
            L  + G  EG   G+  + S   + ALP         V  V GG  CVIC  E     + +C LPC H+FH VC+ +WLR  ++CP CRR++
Sbjct:  169 LVNVMGFGEGSKGGSEEAASPAAVVALPS--------VEVVGGGGECVICKEE-MVKGREVCELPCGHLFHWVCILRWLRKTNTCPCCRRRL 251          
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Match: UPI000B77DE7B (E3 ubiquitin-protein ligase RNF181-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B77DE7B)

HSP 1 Score: 62.4 bits (150), Expect = 2.050e-7
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 0
Query:  925 WDGVGEVDGGRGCVICLSEGSTPAQSLCSLPCEHVFHRVCVGKWLRMQDSCPTCRRQV 982
            W     ++GG  C ICL E S     L  +PC H+FH  C+ +WL++++SCPTCRR++
Sbjct:  116 WRFFAAMEGGD-CAICLEELSGARFPLTKMPCSHIFHERCISRWLKVRNSCPTCRREL 172          
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Match: I1H503_BRADI (RING-type domain-containing protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=I1H503_BRADI)

HSP 1 Score: 58.9 bits (141), Expect = 1.350e-6
Identity = 25/55 (45.45%), Postives = 33/55 (60.00%), Query Frame = 0
Query:  937 CVICLSEGSTPAQSLCSLPCEHVFHRVCVGKWLRMQDSCPTCRRQVSAVENGSAN 991
            C ICL+      ++   LPC H FHR CVGKWLR+  +CPTCR Q+  +   + N
Sbjct:   59 CAICLAADDQRKKA--ELPCGHRFHRGCVGKWLRVHGTCPTCRHQLPPMSPAARN 111          
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Match: A0A2C9WBW4_MANES (RING-type domain-containing protein n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9WBW4_MANES)

HSP 1 Score: 60.8 bits (146), Expect = 1.360e-6
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0
Query:  937 CVICLSEGSTPAQSLCSLPCEHVFHRVCVGKWLRMQDSCPTCRRQV 982
            CVICL E S    +L  L C H+FH  C+  WL+ Q+SCPTCRR++
Sbjct:  164 CVICLEELSNSEVALTKLTCTHIFHEQCILDWLKAQNSCPTCRREL 209          
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Match: A0A7N0T830_KALFE (RING-type domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0T830_KALFE)

HSP 1 Score: 57.0 bits (136), Expect = 1.360e-6
Identity = 22/43 (51.16%), Postives = 27/43 (62.79%), Query Frame = 0
Query:  937 CVICLSEGSTPAQSLCSLPCEHVFHRVCVGKWLRMQDSCPTCR 979
            C IC+ E      S   +PC HVFH +C+ KWLR+  SCPTCR
Sbjct:   27 CAICMEEDQVRLNS--RMPCRHVFHTMCIEKWLRISSSCPTCR 67          
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Match: A0A5A7QEX3_STRAF (RING/U-box superfamily protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QEX3_STRAF)

HSP 1 Score: 59.3 bits (142), Expect = 1.890e-6
Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 0
Query:  932 DGGRGCVICLSEGSTPAQSLCSLPCEHVFHRVCVGKWLRMQDSCPTCRRQV 982
            DGG  C IC  E     + +C LPC H+FH +CV +WL  +D+CP CRR++
Sbjct:   86 DGGGECAICREEMGA-GREVCELPCGHLFHWICVLRWLGRRDTCPCCRRRL 135          
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Match: UPI001EEB320E (E3 ubiquitin-protein ligase MPSR1-like isoform X2 n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEB320E)

HSP 1 Score: 55.8 bits (133), Expect = 2.400e-6
Identity = 24/46 (52.17%), Postives = 28/46 (60.87%), Query Frame = 0
Query:  937 CVICLSEGSTPAQSLCSLPCEHVFHRVCVGKWLRMQDSCPTCRRQV 982
            CVIC  E  T       LPC H FH  C+GKWL +Q +CPTCR+ V
Sbjct:   15 CVICFEEFITE-YGCKRLPCNHKFHSQCIGKWLLVQKTCPTCRKNV 59          
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Match: A0A7N0UZ21_KALFE (RING-type domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UZ21_KALFE)

HSP 1 Score: 57.4 bits (137), Expect = 2.650e-6
Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 0
Query:  932 DGGRGCVICLSEGSTPAQSLCSLPCEHVFHRVCVGKWLRMQDSCPTCRRQV 982
            +GG  C ICL+E     +   +LPC HVFH+VCV  WL    SCPTCR  V
Sbjct:   49 EGGGVCAICLNELEA-GRVAATLPCTHVFHKVCVATWLWENHSCPTCRADV 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig131.2555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE11_9PHAE3.060e-18152.16RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FQ33_ECTSI3.660e-14156.05RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A830CTD3_9LAMI7.210e-838.04E3 ubiquitin-protein ligase sgr9 amyloplastic n=1 ... [more]
UPI000B77DE7B2.050e-743.10E3 ubiquitin-protein ligase RNF181-like n=1 Tax=He... [more]
I1H503_BRADI1.350e-645.45RING-type domain-containing protein n=2 Tax=Brachy... [more]
A0A2C9WBW4_MANES1.360e-652.17RING-type domain-containing protein n=2 Tax=Maniho... [more]
A0A7N0T830_KALFE1.360e-651.16RING-type domain-containing protein n=1 Tax=Kalanc... [more]
A0A5A7QEX3_STRAF1.890e-647.06RING/U-box superfamily protein n=1 Tax=Striga asia... [more]
UPI001EEB320E2.400e-652.17E3 ubiquitin-protein ligase MPSR1-like isoform X2 ... [more]
A0A7N0UZ21_KALFE2.650e-650.98RING-type domain-containing protein n=1 Tax=Kalanc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 937..978
e-value: 1.6E-6
score: 37.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 937..979
e-value: 1.9E-10
score: 40.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 937..979
score: 12.371
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 911..989
e-value: 2.8E-15
score: 57.2
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 829..985
NoneNo IPR availablePANTHERPTHR15710:SF30LD47007Pcoord: 829..985
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 936..985

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig131contigH-canaliculatus_F_contig131:13375..17886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig131.2555.1mRNA_H-canaliculatus_F_contig131.2555.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig131 13339..19088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig131.2555.1 ID=prot_H-canaliculatus_F_contig131.2555.1|Name=mRNA_H-canaliculatus_F_contig131.2555.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=997bp
MTVSNENPVEEHVGYSRLVTSSSLAATHSQVDLVVASIENNIGIPPPLDE
VEASSCPSNSIADRDGIQGTAPRMGEPGGSTIPTGSFGNEPRSDGGSSTS
LSSTPVAATLAAGTGQGSPLGNDASSFSGLPSSLTSHSSPAARTITVTSA
VIESSVESASFTARTSPALSGRVNGDSSRDVLSRSMSSRSRRSTSVTSMR
PLVPAARGLGLPSLASQTMSARVLSEDTRGALSFSPSSTPLGLGMGDTYR
RRISSRNSSSLQQNDQHPLPGYALRLPARQARSEGGRASVRRLAGGGRDS
WRAPAVAYNAVERRTGRDTTALRAVSARLDAAATAIDAVEIGVRSASDSL
DSLLQLLESRPGHSVTPRAAVGNRGSSLEMRSPAPGMVPEESHDSSDSQG
AAREVEPAATSSVAQGTAVVSPGGPRISTASSSMAWEVLEDSSGEPSSDD
TITSVSTPQTVVREGRANAGRTASGRAREGGGGSRAANMLRGELAAGSVL
PHSQREAEEQAESDEYVACAQTTSVGIRDAIIEESKGEPSTMVDGTLTRT
LSPRRPLSSSVGRDIVEELPSSRITEGRESSRRHGFGSLTNSRRYGGRAD
ESTSTTRVGSRTLSGSGTSEDATVGSEVSALPGDAESTSNDGPRSSQATE
ERRSPPRGLVTADSAVILIENEVNREADSDPSDVSLPVRELEAAMDGIDT
ERGRLIIEIARLRGQQNQSLVHLQRLQNEQFVVRQRQVSTLSDIVNSFGR
TVAAAGALPHGENSSLGRISSDVVSTLRRMLRLLSATVPAAIAASPSSST
VDSLPLPTTASTSPDMLASPRSSSPYPVTDAGESSAAHGAIGTLSVGGQL
ALRPTGVDLTQEVIDAALQALPRLAAAATAISGARRMQGYLAGLTGDAEG
RSSGTGRSCSTETIAALPDAPSSTWDGVGEVDGGRGCVICLSEGSTPAQS
LCSLPCEHVFHRVCVGKWLRMQDSCPTCRRQVSAVENGSANPFLST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING