mRNA_H-canaliculatus_F_contig13063.2533.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13063.2533.1
Unique NamemRNA_H-canaliculatus_F_contig13063.2533.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Match: D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI)

HSP 1 Score: 463 bits (1191), Expect = 5.700e-158
Identity = 222/245 (90.61%), Postives = 236/245 (96.33%), Query Frame = 1
Query:    1 ASIMRELNHPNVVSIYDFYDDDPKYYYMVLELMEGGELFDRIVQKQFYNEAEARDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVSILDGPVSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASEACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV 735
            A+IMREL+HPN+VSIYDFY DDPK++YMVLELMEGGELFDRIVQKQ+YNEAEARDVCLT LEAMKY HGQGVVHRDLKPENLLLAS SDDSSIRLADFGFAVS+LDG V+DQCGTPGYVAPEILR +PY T+VDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGH+RFDPEYWNDVSSEAKDLIRKLLTVDP RRLTA+EAC+HPWLSTARGNLT+HDLG GLEKLKIFNATRKLRAAIRSV
Sbjct:  427 ANIMRELDHPNLVSIYDFYQDDPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTARGNLTQHDLGAGLEKLKIFNATRKLRAAIRSV 671          
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Match: A0A6H5K8I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I6_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 5.440e-152
Identity = 215/245 (87.76%), Postives = 233/245 (95.10%), Query Frame = 1
Query:    1 ASIMRELNHPNVVSIYDFYDDDPKYYYMVLELMEGGELFDRIVQKQFYNEAEARDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVSILDGPVSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASEACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV 735
            A+IM ELNHPN+V+IYDFY D+PK++YMVLELMEGGELFDRIVQKQ+YNEAEARDVCLT+LEA+KY HGQGVVHRDLKPENLLLAS SDDSSIRLADFGFAVS+LDG V+DQCGTPGYVAPEILR  PY T+VDMWSIGVIIYIILAGYPPF DEDQ+RLYRKIKAGH+RF+PEYWNDVSSEAKDLIRKLL VDP RRLTA+EAC+HPWLSTARGNLTKHDLG GLEKLKIFNATRKLRAAIR+V
Sbjct:  422 ATIMHELNHPNLVTIYDFYRDNPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTILEAIKYIHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRGHPYGTSVDMWSIGVIIYIILAGYPPFCDEDQHRLYRKIKAGHYRFEPEYWNDVSSEAKDLIRKLLIVDPTRRLTAAEACEHPWLSTARGNLTKHDLGAGLEKLKIFNATRKLRAAIRTV 666          
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 2.340e-121
Identity = 167/243 (68.72%), Postives = 202/243 (83.13%), Query Frame = 1
Query:    7 IMRELNHPNVVSIYDFYDDDPKYYYMVLELMEGGELFDRIVQKQFYNEAEARDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVSILDGPVSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASEACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV 735
            I+R L HPNV+ IY F+ DDP  YY+ +E M GGELFDRIV+K FYNE EARD+C  LL+A++YCH  G+VHRDLKPENLLL S  DD++++LADFGFA SI+ G VS QCGTPGYVAPEILR + Y T+VDMWSIGVI+YI+L GYPPFHDE+Q RL+RKIKAG+F+F PEYW   SSEAKDLIR+LLTVDPK+RLTA++A  HPWL +   +L KH+LGV LE+L++FNA RKLRAAI+SV
Sbjct:  109 ILRSLKHPNVIDIYQFFKDDPDNYYVSIEYMRGGELFDRIVKKAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANVKLADFGFARSIMGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDDDLLKHNLGVNLEQLRLFNARRKLRAAIKSV 351          
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 6.180e-120
Identity = 165/243 (67.90%), Postives = 201/243 (82.72%), Query Frame = 1
Query:    7 IMRELNHPNVVSIYDFYDDDPKYYYMVLELMEGGELFDRIVQKQFYNEAEARDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVSILDGPVSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASEACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV 735
            I+R L H NVV+IY F+ DDP YYYMVLE M GGELFDRIVQK +YNE EARD+C  LL++++YCH  G+VHRDLKPENLLL S  DD+ I+LADFGFA S+L+GPVS+QCG+PGYVAPEILR  PY T+VDMWS+GVIIY +L GYPPFHDE+Q RL+R+IKAG F+F  EYW++ S EAKDLIRKLL VDP +R+TA++A +HPWL T   +L  H+LG  L++L+IFNATRKLR AI+SV
Sbjct:  133 ILRLLQHSNVVAIYQFFQDDPDYYYMVLENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 375          
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Match: D8LGW1_ECTSI (Ca2+/calmodulin-dependent protein kinase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW1_ECTSI)

HSP 1 Score: 357 bits (917), Expect = 3.720e-116
Identity = 166/245 (67.76%), Postives = 204/245 (83.27%), Query Frame = 1
Query:    1 ASIMRELNHPNVVSIYDFYDDDPKYYYMVLELMEGGELFDRIVQKQFYNEAEARDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVSILDGPVSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASEACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV 735
            A+IMRELNHPNVVSIY FY+DDPKY+Y+ LELMEGGEL DRIVQK +YNEAEARDVC+ LL A++Y H QG+VHRDLKPENLLLAS SD +SIRLADFGFA SI DG + + CGTP YVAPE+L++ PY  +VDMWS+GVII+++LAG PPFHD DQ  ++RKIK+G ++F  ++W  +S +AKDLI KLLTVDP +RLTASEAC HPWL+T   NL+ H+L   LE+LK+FN  RKLRAA+++V
Sbjct:  475 ANIMRELNHPNVVSIYGFYEDDPKYFYLALELMEGGELLDRIVQKTYYNEAEARDVCVPLLRAVEYLHSQGIVHRDLKPENLLLASASDATSIRLADFGFAASIRDGDLINGCGTPFYVAPEMLKNVPYGASVDMWSVGVIIFVLLAGRPPFHDRDQKLMFRKIKSGEYQFKGDFWQGISGDAKDLITKLLTVDPAKRLTASEACKHPWLTTDAPNLSCHNLSARLEQLKVFNTVRKLRAAVKTV 719          
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA)

HSP 1 Score: 338 bits (868), Expect = 9.730e-114
Identity = 159/245 (64.90%), Postives = 193/245 (78.78%), Query Frame = 1
Query:    1 ASIMRELNHPNVVSIYDFYDDDPKYYYMVLELMEGGELFDRIVQKQFYNEAEARDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVSILDGPVSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASEACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV 735
              I+R+LNHPN++ IY FY  +   YY+++E M GGELFDRIV+KQFY E EARD+C  LL+A+KYCH + +VHRDLKPENLLL S  DD+SI+LADFGFA ++    V+ QCGTP YVAPEILRH+PY T+VDMWSIGVIIYI+L GYPPFHDE+Q RL+RKI+AG F F  EYW  +SS+AKDLI +LLTVD   RLTA EA  HPWL T+  +L   +LG  LE+LK+FNA RKLRAAI+SV
Sbjct:   89 VKILRQLNHPNIIDIYQFYRQERDNYYVIIEYMRGGELFDRIVKKQFYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDASIKLADFGFAKALNGSMVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAKDLISRLLTVDQHSRLTAREAVSHPWLLTSDTDLAARNLGKNLEQLKLFNARRKLRAAIKSV 333          
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Match: A0A6H5KCN7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN7_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 5.030e-109
Identity = 150/218 (68.81%), Postives = 182/218 (83.49%), Query Frame = 1
Query:   82 MVLELMEGGELFDRIVQKQFYNEAEARDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVSILDGPVSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASEACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV 735
            MVLE M GGELFDRIVQK +YNE EARD+C  LL+++KYCH  G+VHRDLKPENLLL S  DD+ I+LADFGFA S+L+GPVS+QCG+PGYVAPEILR  PY T+VDMWS+GVIIY +L GYPPFHDE+Q RL+R+IKAG F+F  EYW++ S EAKDLIRKLL VDP +R+TA++A +HPWL T   +L  H+LG  L++L+IFNATRKLR AI+SV
Sbjct:    1 MVLENMAGGELFDRIVQKTYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGESLASHNLGKNLDQLRIFNATRKLRGAIQSV 218          
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA)

HSP 1 Score: 307 bits (787), Expect = 3.150e-101
Identity = 143/246 (58.13%), Postives = 188/246 (76.42%), Query Frame = 1
Query:    1 ASIMRELNHPNVVSIYDFYDDDPKYYYMVLELMEGGELFDRIVQKQFYNEAEARDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVSILDGP-VSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASEACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV 735
             +I++ ++HPN++ +Y+F+++   +YY+V+ELMEGGELFDRIVQK +YNE EARD+   LL A+K+CH  G+VHRDLKPENLLL S  DD+SI++ADFGFA  + +   ++ QCGTPGYVAPEIL   PY   VDMWSIGVI YI+L GYPPFHDE Q+ L+ KI+AG F F PEYW+ VS EAKDLIRKLLTVDP +R+TA+EA  HPW++ A   L   +L   L +L+ FNA RK R+ ++++
Sbjct:   76 VTILKHVDHPNIIKLYEFFEEK-HFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKESNNLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNKRITAAEAMQHPWVTGADETLAARNLDSQLRELRRFNARRKFRSGVKAI 320          
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Match: A0A7S0SZL7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZL7_9STRA)

HSP 1 Score: 298 bits (763), Expect = 6.280e-99
Identity = 140/240 (58.33%), Postives = 179/240 (74.58%), Query Frame = 1
Query:   16 ELNHPNVVSIYDFYDDDPKYYYMVLELMEGGELFDRIVQKQFYNEAEARDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVSILDGPVSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASEACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV 735
            +LNHPN+++ YDF++++ K YY+VLE M+GGELFDRIV+K  YNE EARDV   L+ A+KYCH + VVHRDLKPENLLL S  DD+S+++ADFGFAV +    +S QCGTPGY+APEIL ++PY   VDMWSIGVI YIIL GYPPFHD++   L+RKI+ G F F PEYWN+VSS+AK+LI+ LLTV+   RLTA +   HPWL T    L   +L   L + K FNA R+ + A ++V
Sbjct:    1 QLNHPNIINCYDFFEEE-KNYYVVLEYMDGGELFDRIVKKTVYNEKEARDVVKILVSAIKYCHDRDVVHRDLKPENLLLTSREDDASLKIADFGFAVRVNSNLLSTQCGTPGYIAPEILENKPYGKAVDMWSIGVITYIILGGYPPFHDDNMRNLFRKIRKGDFEFHPEYWNNVSSDAKNLIKGLLTVNASARLTADQVLQHPWLMTDDATLAAINLDSNLAEFKKFNAARRFKGAAKAV 239          
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Match: A0A8J2S556_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S556_9STRA)

HSP 1 Score: 297 bits (761), Expect = 9.180e-98
Identity = 136/245 (55.51%), Postives = 180/245 (73.47%), Query Frame = 1
Query:    1 ASIMRELNHPNVVSIYDFYDDDPKYYYMVLELMEGGELFDRIVQKQFYNEAEARDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVSILDGPVSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASEACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV 735
             +++R ++HPN+V +YDF+D+  +YYYM +ELMEGGELF+RIV+K FYNE +AR +   LL+A+ Y H +G+VHRDLKPENLLL SP +D  I+LADFGFA  +    +  QCGTPGYVAPEIL+ + Y T VDMWS GVI+YI+L GYPPFHD++   LYRKIKA  + FDP+YW+ VS +AKDLI+K+L VDP +RLTAS+A  HPW       L   +L   L+ +K FNA RK +  ++ +
Sbjct:   74 VAVLRSVDHPNIVKLYDFFDEK-RYYYMAIELMEGGELFERIVKKTFYNEMDARGLVRILLDALAYLHHRGIVHRDLKPENLLLKSPFNDFDIKLADFGFAKKVEGKSLDTQCGTPGYVAPEILKGKKYGTAVDMWSCGVIVYILLGGYPPFHDDNHAVLYRKIKAADYAFDPQYWDQVSDDAKDLIKKMLVVDPDKRLTASQALRHPWFMVGDHELISRNLAKTLDTMKKFNARRKFKGKVKGI 317          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13063.2533.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEF0_ECTSI5.700e-15890.61Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpu... [more]
A0A6H5K8I6_9PHAE5.440e-15287.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8A8_9PHAE2.340e-12168.72Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LK21_ECTSI6.180e-12067.90Possible Ca2+/calmodulin-dependent protein kinase,... [more]
D8LGW1_ECTSI3.720e-11667.76Ca2+/calmodulin-dependent protein kinase II n=1 Ta... [more]
A0A835YZ60_9STRA9.730e-11464.90Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5KCN7_9PHAE5.030e-10968.81Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S2XV40_9STRA3.150e-10158.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0SZL7_9STRA6.280e-9958.33Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A8J2S556_9STRA9.180e-9855.51Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13063contigH-canaliculatus_F_contig13063:640..3278 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.9
Seed ortholog evalue1.5e-95
Seed eggNOG ortholog2880.D8LGW1
KEGG koko:K08794
KEGG Pathwayko04921,ko04925,map04921,map04925
EggNOG free text desc.calmodulin-dependent protein kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759,KOG0033@1,KOG0033@2759
EC2.7.11.17
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons4
Model size735
Cds size726
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13063.2533.1prot_H-canaliculatus_F_contig13063.2533.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13063 649..3278 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929041.5158532-UTR-H-canaliculatus_F_contig13063:639..6481622929041.5158532-UTR-H-canaliculatus_F_contig13063:639..648Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig13063 640..648 +
1696845658.0234015-UTR-H-canaliculatus_F_contig13063:639..6481696845658.0234015-UTR-H-canaliculatus_F_contig13063:639..648Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig13063 640..648 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929041.5360196-CDS-H-canaliculatus_F_contig13063:648..7741622929041.5360196-CDS-H-canaliculatus_F_contig13063:648..774Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13063 649..774 +
1696845658.0345948-CDS-H-canaliculatus_F_contig13063:648..7741696845658.0345948-CDS-H-canaliculatus_F_contig13063:648..774Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13063 649..774 +
1622929041.5517964-CDS-H-canaliculatus_F_contig13063:1769..20271622929041.5517964-CDS-H-canaliculatus_F_contig13063:1769..2027Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13063 1770..2027 +
1696845658.046352-CDS-H-canaliculatus_F_contig13063:1769..20271696845658.046352-CDS-H-canaliculatus_F_contig13063:1769..2027Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13063 1770..2027 +
1622929041.5632524-CDS-H-canaliculatus_F_contig13063:2472..26311622929041.5632524-CDS-H-canaliculatus_F_contig13063:2472..2631Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13063 2473..2631 +
1696845658.0553021-CDS-H-canaliculatus_F_contig13063:2472..26311696845658.0553021-CDS-H-canaliculatus_F_contig13063:2472..2631Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13063 2473..2631 +
1622929041.574779-CDS-H-canaliculatus_F_contig13063:3095..32781622929041.574779-CDS-H-canaliculatus_F_contig13063:3095..3278Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13063 3096..3278 +
1696845658.0640872-CDS-H-canaliculatus_F_contig13063:3095..32781696845658.0640872-CDS-H-canaliculatus_F_contig13063:3095..3278Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13063 3096..3278 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13063.2533.1

>prot_H-canaliculatus_F_contig13063.2533.1 ID=prot_H-canaliculatus_F_contig13063.2533.1|Name=mRNA_H-canaliculatus_F_contig13063.2533.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=242bp
MRELNHPNVVSIYDFYDDDPKYYYMVLELMEGGELFDRIVQKQFYNEAEA
RDVCLTLLEAMKYCHGQGVVHRDLKPENLLLASPSDDSSIRLADFGFAVS
ILDGPVSDQCGTPGYVAPEILRHQPYTTTVDMWSIGVIIYIILAGYPPFH
DEDQNRLYRKIKAGHFRFDPEYWNDVSSEAKDLIRKLLTVDPKRRLTASE
ACDHPWLSTARGNLTKHDLGVGLEKLKIFNATRKLRAAIRSV
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mRNA from alignment at H-canaliculatus_F_contig13063:640..3278+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13063.2533.1 ID=mRNA_H-canaliculatus_F_contig13063.2533.1|Name=mRNA_H-canaliculatus_F_contig13063.2533.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2639bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13063:640..3278+ (Hapterophycus canaliculatus Oshoro5f female)
GCGAGCATCATGCGCGAGCTGAACCACCCCAACGTCGTCAGCATCTACGA CTTCTACGACGACGACCCGAAGTACTACTACATGGTGCTCGAGCTTATGG AGGGCGGGGAGCTCTTCGACCGCATTGTACAAAAGGTACGGGTTTGGATG TGGGGGTGGCGGGGGGGGGGGGGCTAGCATGGTCAGAGTTGGGATCGGGG GAGTGTCTGCTCTGCGCGCCGACCGCTTCTCGTATAAAGGAGGAGAGGAA GCAATTTCAAGCACTTTTCGAGGGTCGGGTTAAGCTGTGGCCCTTGTGTG TATCTGGGCGGGGCAGAGAGCGCTGCTCGCCATCCAAAGTGGGGGTGGAG GCTGAAAGGGTCTGCGAAGGCTCACGTTGGCGTTGACTCTGTCTGCCCCG GCCTGCTCGTCCACCGAAAGGCGAGCAGTTGTGCAAAGGACATTCGAGGT ACAAAGGTGTGGAAGGCCCGAACCGATGCTGAGTCAAGAAGGTAGGTGGT CGAGTGTGCCGCCAAGCTCCCCACAAGGAAAAGGGCCTTCCGCTCTTGAA ACTGCGCGCACATCGTCGTCGGGGAGAGAGAGAGGAAGCTTGGCGGAGGA GGCACTGGAGCGTGTGCGCGCGGGGAGCCGCGAGGGCTAGGCGACTCCGG AAGTATTTTCTCTTCCGTGAGGGGGTGGCTTTTCTCTCTCTTCCGTGAGG GAGTGGCGTACCAGGCATCTCCCGGGAGCAGGGGGAACGACGCGCTTCCG GCGGCGAACACTCGGACGAAGAAAGCACGGATTTACAGGAGGAGGCGTTT CGGCTTGGTGCCACGGAGGAGGGGACGGGAGTAGTGCGCTCCGTCTCCGC CCAGAAGTCGCGGTCGAGCGGCGATCACGCTCGTAAGAAGACCAGCTGGC CGAGAGCGAGCAGCGGCCTTGCCCCCCCGTCCCCCTCTGCCCCGAGGCCC GCAGCAGCGCACGAGCTAGTCCTTCCGTGTTCGTAGCAGGATCCGGTTCG GCGTGCGTGCGCTCTTCACCTGCGGCGCACGAGAGTTGTTACACGAGAGA GGCGTGGTGGTTCCGCCCGCGCTTGACGTCCCCCGCCCCCCCCCCCGCTT TCCCGTGCCCGGCTTACTCCCCGCGCCCAGCAATTCTACAACGAGGCGGA GGCTCGGGACGTGTGCTTGACGCTCCTGGAGGCCATGAAGTACTGCCACG GCCAGGGCGTCGTCCACCGTGACCTCAAGCCCGAGAACCTCCTCCTCGCC TCTCCTAGCGACGACTCCAGCATCCGCCTGGCCGACTTCGGCTTCGCGGT CAGCATCCTCGACGGGCCCGTGTCCGACCAATGCGGGACCCCCGGCTACG TGGCCCCCGAGATCCTGAGGCACCAGCCGTATACCACGGTGAGGGGCGGG CTAGTGGTTGCGGTGGGGGGGGGGGTGGGGGTGGGGGAATTCTTGCGCCG CGGGTCGAGCAAAAGGCGCCATCTTGGCCAGGGTACCGGGGGCGGAGTCT CGTTGCCGTTGTCCTTTCTCTAGGCTCCCGATCGGCGCGGGTGCGGGTGC GTGTGCGTGTGCGTGTGCGCGTAGGATCCTGGGGGCGGAGCCGTTGCGGT TGTAGCAGGGGGAGCAGCGCAACTGTGTTGGCGGGCATGGTTGCGTCGCG AATATTCAGAGGGCGAGAGTCGGGCTCCCGGGAGCGTTCTCGCCGTCTCG CACGAACCGATCCTCCTCGCCAAAATCCTCCCCACCAGCCGTCGCCGCCG TCGCCGCCGCCGCCGCCGCCCCTTCCGCTCGTTGGGTTCCCCGACCTGAC GCCCTCGATTCCTTTTTCTTGGTGCTGTTGCAGACGGTGGACATGTGGAG CATCGGCGTGATCATCTACATCATCCTCGCCGGGTACCCCCCGTTCCACG ACGAGGACCAGAACCGGCTGTACCGCAAGATCAAGGCGGGGCACTTCCGA TTCGACCCGGAGTACTGGAACGACGTGTCGTCGGAGGCGAAGGTGAGGGG ACGTTTGCCTCGTGTCCTCGGCCGGTATGTGCCGTGTTTTTCCGCCGGAA TGGGCGATCATGCGTTTCGACAGCGAGCGTGGGAGGGTAGTGCTGAGCTC GCTCCGCTGCCGTTTTGTGGTAGAGGGGTCCCGCGAAACGAAGATGATTT TCACAGGGGGGGGGGGGGGGGGGGGTTGACTCGTGGAGGTCCGACCCTCT TATCACGTTGTGCTGGCTGCCTGTCCGTGGTGACCAAACCAGGGAGATGT CGTGAATGACCCCGAAAACCCCGAGCCCCATCCCCGCCGCCCCCGGCTTG CACCGGCAAAAAATCCATCCCGCTCAGCACACACCCCGCAAGAATTACCA AGACCACTTCCACGTGCGTCTCACGCCTTCGTTTGTTCGCCGCGTACCGT CGTGCTGCTCTCATCCCTGGGTTTACGCCCGCCCGCCCCTCCGACCAAAC GAGCAGGACCTGATCCGCAAGCTGCTGACCGTGGACCCTAAGAGGCGCCT CACCGCCTCGGAGGCGTGCGACCACCCGTGGCTCTCTACGGCGAGAGGAA ACCTCACGAAGCACGACCTCGGAGTCGGCCTCGAGAAGCTCAAGATCTTC AACGCTACCAGGAAGCTCCGCGCCGCCATCAGATCGGTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13063:640..3278+

>mRNA_H-canaliculatus_F_contig13063.2533.1 ID=mRNA_H-canaliculatus_F_contig13063.2533.1|Name=mRNA_H-canaliculatus_F_contig13063.2533.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1452bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13063:640..3278+ (Hapterophycus canaliculatus Oshoro5f female)
ATGCGCGAGCTGAACCACCCCAACGTCGTCAGCATCTACGACTTCTACGA
CGACGACCCGAAGTACTACTACATGGTGCTCGAGCTTATGGAGGGCGGGG
AGCTCTTCGACCGCATTGTACAAAAGATGCGCGAGCTGAACCACCCCAAC
GTCGTCAGCATCTACGACTTCTACGACGACGACCCGAAGTACTACTACAT
GGTGCTCGAGCTTATGGAGGGCGGGGAGCTCTTCGACCGCATTGTACAAA
AGCAATTCTACAACGAGGCGGAGGCTCGGGACGTGTGCTTGACGCTCCTG
GAGGCCATGAAGTACTGCCACGGCCAGGGCGTCGTCCACCGTGACCTCAA
GCCCGAGAACCTCCTCCTCGCCTCTCCTAGCGACGACTCCAGCATCCGCC
TGGCCGACTTCGGCTTCGCGGTCAGCATCCTCGACGGGCCCGTGTCCGAC
CAATGCGGGACCCCCGGCTACGTGGCCCCCGAGATCCTGAGGCACCAGCC
GTATACCACGCAATTCTACAACGAGGCGGAGGCTCGGGACGTGTGCTTGA
CGCTCCTGGAGGCCATGAAGTACTGCCACGGCCAGGGCGTCGTCCACCGT
GACCTCAAGCCCGAGAACCTCCTCCTCGCCTCTCCTAGCGACGACTCCAG
CATCCGCCTGGCCGACTTCGGCTTCGCGGTCAGCATCCTCGACGGGCCCG
TGTCCGACCAATGCGGGACCCCCGGCTACGTGGCCCCCGAGATCCTGAGG
CACCAGCCGTATACCACGACGGTGGACATGTGGAGCATCGGCGTGATCAT
CTACATCATCCTCGCCGGGTACCCCCCGTTCCACGACGAGGACCAGAACC
GGCTGTACCGCAAGATCAAGGCGGGGCACTTCCGATTCGACCCGGAGTAC
TGGAACGACGTGTCGTCGGAGGCGAAGACGGTGGACATGTGGAGCATCGG
CGTGATCATCTACATCATCCTCGCCGGGTACCCCCCGTTCCACGACGAGG
ACCAGAACCGGCTGTACCGCAAGATCAAGGCGGGGCACTTCCGATTCGAC
CCGGAGTACTGGAACGACGTGTCGTCGGAGGCGAAGGACCTGATCCGCAA
GCTGCTGACCGTGGACCCTAAGAGGCGCCTCACCGCCTCGGAGGCGTGCG
ACCACCCGTGGCTCTCTACGGCGAGAGGAAACCTCACGAAGCACGACCTC
GGAGTCGGCCTCGAGAAGCTCAAGATCTTCAACGCTACCAGGAAGCTCCG
CGCCGCCATCAGATCGGTGGACCTGATCCGCAAGCTGCTGACCGTGGACC
CTAAGAGGCGCCTCACCGCCTCGGAGGCGTGCGACCACCCGTGGCTCTCT
ACGGCGAGAGGAAACCTCACGAAGCACGACCTCGGAGTCGGCCTCGAGAA
GCTCAAGATCTTCAACGCTACCAGGAAGCTCCGCGCCGCCATCAGATCGG
TG
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