mRNA_H-canaliculatus_F_contig1306.2532.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Match: D7FN25_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN25_ECTSI) HSP 1 Score: 216 bits (550), Expect = 4.750e-67 Identity = 105/131 (80.15%), Postives = 116/131 (88.55%), Query Frame = 1
Query: 22 DWCFAITDCVSFVPSLVEAYKGFTPGKVDVVFVSSDRSADHQRRYMEEALHPDWPAVTFEGDHRADLKRRFGACAGSEMSALGMSYADRKGGIPTLAVFRASDGVLLTMNGVGDVEQAGSGAVDRWEAAAN 414
WC DCV FVPSLVEA+KGF PG+ D+VF+SSDRS + QRRYMEE LH DWPAVTF+G+HRADLKRRFGACAGSE++ALGMS +DRKGGIPTLAVFRASDGVLLTMNGV DV QAG+GAVDRWEAAAN
Sbjct: 34 QWC---PDCVRFVPSLVEAFKGFKPGQADIVFISSDRSEELQRRYMEEVLHADWPAVTFDGEHRADLKRRFGACAGSEVTALGMSPSDRKGGIPTLAVFRASDGVLLTMNGVDDVNQAGAGAVDRWEAAAN 161
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Match: A0A835YIY6_9STRA (Thioredoxin-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIY6_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.670e-19 Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 22 DWCFAITDCVSFVPSLVEAYKGFT----PGKVDVVFVSSDRSADHQRRYMEEALHPDWPAVTFEGDHRADLKRRFGACAGSEMSALGMSYADRKGGIPTLAVFRASDGVLLTMNGVGDVEQAGSGAVDRWEAAANE 417
WC +C F P L Y+ P ++DVV+VSSD SA + M+ + H W AV F+GDHR LK+R+ CA EMSA+G+S R GIP+L V S V+ T+ GV D+ G+ A+D W A A +
Sbjct: 29 SWC---PECKDFTPLLKSTYESVNTAGQPNRLDVVYVSSDGSAQEMQDCMDRS-HAAWAAVPFDGDHRTALKQRYSICAMREMSAVGVSK--RVDGIPSLVVLNPSCDVI-TLKGVADIRLKGAAAIDEWTAKAGQ 157
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Match: C5KGG7_PERM5 (Thioredoxin, putative n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KGG7_PERM5) HSP 1 Score: 90.5 bits (223), Expect = 2.250e-18 Identity = 50/129 (38.76%), Postives = 72/129 (55.81%), Query Frame = 1
Query: 25 WCFAITDCVSFVPSLVEAY---KGFTPGKVDVVFVSSDRSADHQRRYMEEALHPDWPAVTFEGDH-RADLKRRFGACAGSEMSALGMSYADRKGGIPTLAVFRASDGVLLTMNGVGDVEQAGSGAVDRW 399
WC DC++F P++ + Y K P K++++FVSSD+S + Q Y + PDW V F RA LK+ +G CA EM +G+S + RK GIPTL V + + + D+E+ G AVDRW
Sbjct: 41 WC---PDCIAFTPTVKKFYEDVKAKNPDKLEIIFVSSDKSENEQIAYHRNDM-PDWLRVPFNDKRTRATLKKEYGVCAKKEMEDIGISDSQRKAGIPTLVVLSKNRRTVKVFDAGADIEKYGEAAVDRW 165
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Match: A0A484E3N9_BRELC (Thioredoxin domain-containing protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3N9_BRELC) HSP 1 Score: 85.9 bits (211), Expect = 9.800e-17 Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 22 DWCFAITDCVSFVPSLVEAYKGFTPGKVDVVFVSSDRSADHQRRYMEEALHPDWPAVTFEGDHRADLKRRFGACAGSEMSALGMSYADRKGGIPTLAVFRASDGVLLTMNGVGDVEQAGSGAVDRWE 402
DWC DC +F P+L Y+ T GK+D+VFV SD SA+ Q + E W A +FEG+ R LKR+FG CA +E+ L R+GGIPTL + R DG +L +G+ +++ G A+ +W+
Sbjct: 38 DWC---PDCRAFQPTLNRFYES-TGGKLDIVFVGSDASAEDQFTHFTEKQGSWWMA-SFEGEIRTQLKRKFGICASAEVDDL--YPITRQGGIPTLLIIRC-DGEILDADGINSIKRDGFEALTKWQ 156
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Match: A0A7J6PHW4_PEROL (Thioredoxin domain-containing protein n=2 Tax=Perkinsus TaxID=28000 RepID=A0A7J6PHW4_PEROL) HSP 1 Score: 85.1 bits (209), Expect = 2.240e-16 Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 1
Query: 25 WCFAITDCVSFVPSLVEAY---KGFTPGKVDVVFVSSDRSADHQRRYMEEALHPDWPAVTFEGDH-RADLKRRFGACAGSEMSALGMSYADRKGGIPTLAVFRASDGVLLTMNGVGDVEQAGSGAVDRW 399
WC DC++F P++ + Y K K++++FVSSD+S + Q Y + + DW V + RA LK+ +G CA EM +GMS + RK GIPTL V + + + D+E+ G+ AVDRW
Sbjct: 41 WC---PDCIAFTPTVKKFYEDVKAKNSDKLEIIFVSSDKSENEQVAYHQNDM-ADWLRVPYSDKRTRAMLKKEYGVCAKKEMEDIGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGADIEKYGAAAVDRW 165
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Match: A0A7J6LHT8_PEROL (Thioredoxin domain-containing protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LHT8_PEROL) HSP 1 Score: 84.0 bits (206), Expect = 5.690e-15 Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = 1
Query: 25 WCFAITDCVSFVPSLVEAY---KGFTPGKVDVVFVSSDRSADHQRRYMEEALHPDWPAVTFEGDH-RADLKRRFGACAGSEMSALGMSYADRKGGIPTLAVFRASDGVLLTMNGVGDVEQAGSGAVDR 396
WC DC++F P++ + Y K P K++++FVSSD+S + Q Y + + DW V + RA LK+ +G CA EM +GMS + RK GIPTL V + + + D+E+ G+ AVDR
Sbjct: 41 WC---PDCIAFTPTVKKFYEDVKAKNPDKLEIIFVSSDKSENEQVAYHQNDM-ADWLRVPYSDKRTRAMLKKEYGVCAKKEMEDIGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGADIEKYGAAAVDR 164
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Match: A0A7J6LK23_PERCH (Thioredoxin domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LK23_PERCH) HSP 1 Score: 83.2 bits (204), Expect = 1.270e-14 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1
Query: 25 WCFAITDCVSFVPSLVEAY---KGFTPGKVDVVFVSSDRSADHQRRYMEEALHPDWPAVTFEGDH-RADLKRRFGACAGSEMSALGMSYADRKGGIPTLAVFRASDGVLLTMNGVGDVEQAGSGAVDR 396
WC DC +F P+L + Y K P K+++VFVSSD+S + Q Y + + DW V F RA LK+ +G CA EM LGMS + RK GIPTL V + + + D+E+ G AV+R
Sbjct: 39 WC---PDCTAFTPTLNKFYEDVKAKDPNKLEIVFVSSDKSENEQVAYHQNDM-ADWLRVPFNDKRTRAMLKKEYGVCAKKEMDDLGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGTDIEKYGDAAVER 162
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Match: W2PLE8_PHYPN (Thioredoxin domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=W2PLE8_PHYPN) HSP 1 Score: 79.7 bits (195), Expect = 3.720e-14 Identity = 52/127 (40.94%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 22 DWCFAITDCVSFVPSLVEAYKGFTPGKVDVVFVSSDRSADHQRRYMEEALHPDWPAVTFEGDHRADLKRRFGACAGSEMSALGMSYADRKGGIPTLAVFRASDGVLLTMNGVGDVEQAGSGAVDRWE 402
DWC DC +F P+ Y+ +DVVFV SD SA Q + + P W V FEG+ R LKR+FG CAG+E+S L RKGGIPTL V R DG ++ + +E+ G A+ W+
Sbjct: 71 DWC---PDCRAFQPAFNRFYET-AKDNLDVVFVGSDASAKDQLAHFTDKQGP-WWMVPFEGETRTLLKRKFGVCAGAEVSEL--RPITRKGGIPTLVVIRP-DGEVVDFHAADKIERDGIKALAAWQ 189
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Match: A0A3M6VF28_9STRA (Thioredoxin domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF28_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 1.650e-12 Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 22 DWCFAITDCVSFVPSLVEAYKGFTPGKVDVVFVSSDRSADHQRRYMEEALHPDWPAVTFEGDHRADLKRRFGACAGSEMSALGMSYADRKGGIPTLAVFRASDGVLLTMNGVGDVEQAGSGAVDRWE 402
DWC DC +F P L Y+ G +D+VFV SD SA Q + + P W V+F+G+ R LKRR+G CA +E++ L S RKGGIPTL V R +G ++ +E+ G + W+
Sbjct: 38 DWC---PDCRAFQPILNRFYETTCNG-LDLVFVGSDASAKDQLAHFKNKQGP-WWMVSFDGETRTQLKRRYGICAAAEVTEL--SPIIRKGGIPTLVVIR-HNGEVVDFYAADKIERDGVKVLAEWQ 156
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Match: A0A7J6SGA9_PEROL (Thioredoxin-like_fold domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SGA9_PEROL) HSP 1 Score: 73.2 bits (178), Expect = 1.320e-11 Identity = 41/106 (38.68%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 82 KGFTPGKVDVVFVSSDRSADHQRRYMEEALHPDWPAVTFEGDH-RADLKRRFGACAGSEMSALGMSYADRKGGIPTLAVFRASDGVLLTMNGVGDVEQAGSGAVDR 396
K P K++++FVSSD+S + Q Y + + DW V + RA LK+ +G CA EM +GMS + RK GIPTL V + + + D+E+ G+ AVDR
Sbjct: 10 KAKNPDKLEIIFVSSDKSENEQVAYHQNDM-ADWLRVPYSDKRTRAMLKKEYGVCAKKEMEDIGMSDSQRKSGIPTLVVLSKNRRTVKVFDAGADIEKYGAAAVDR 114 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1306.2532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1306.2532.1 >prot_H-canaliculatus_F_contig1306.2532.1 ID=prot_H-canaliculatus_F_contig1306.2532.1|Name=mRNA_H-canaliculatus_F_contig1306.2532.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=140bp MACFACLDWCFAITDCVSFVPSLVEAYKGFTPGKVDVVFVSSDRSADHQRback to top mRNA from alignment at H-canaliculatus_F_contig1306:23355..26010- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1306.2532.1 ID=mRNA_H-canaliculatus_F_contig1306.2532.1|Name=mRNA_H-canaliculatus_F_contig1306.2532.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2656bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1306:23355..26010- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1306:23355..26010- >mRNA_H-canaliculatus_F_contig1306.2532.1 ID=mRNA_H-canaliculatus_F_contig1306.2532.1|Name=mRNA_H-canaliculatus_F_contig1306.2532.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=840bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1306:23355..26010- (Hapterophycus canaliculatus Oshoro5f female)back to top |