prot_H-canaliculatus_F_contig1303.2513.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1303.2513.1
Unique Nameprot_H-canaliculatus_F_contig1303.2513.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length308
Homology
BLAST of mRNA_H-canaliculatus_F_contig1303.2513.1 vs. uniprot
Match: A0A6H5K121_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K121_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 6.600e-90
Identity = 185/247 (74.90%), Postives = 200/247 (80.97%), Query Frame = 0
Query:   22 LMTTRGRRP-RGGPRRWKLLTPTVLWSVVILAMAPSFYGFTGGLGGFPTSRSAGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAKGSPFAAASWLKERVRDGKRRVQMQMMSMVSDASVDTKRFEDAPVPVEDRGFHINGWRWHSRAVLRDVGRFRRAALLAXXXXXXXXXXXXXXA--VERVAKCYGFMWKFSFTKLHKTETSLFFPWLRELVPREDLPPLSEFDREREGVVRIGKKIGQ 265
            ++  +GRRP RGGPRRW LLTPTVLWSVVILAM PSFYGF   +           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS KGSPFAAASWLKERVRDGKRRVQMQ+MSMV D S+D K F+DAPVP+++RGFH+NGWRWHSRAVLRD+ RFRRAAL A              A  VERVAKCYGFMW FS TKLH TETSLFFPWLR+LVP+E LPPLSEFDRER GVVRIG+KIGQ
Sbjct:    1 MVLPKGRRPCRGGPRRWTLLTPTVLWSVVILAMMPSFYGF---VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVKGSPFAAASWLKERVRDGKRRVQMQVMSMVPDTSMDAKCFDDAPVPLDERGFHVNGWRWHSRAVLRDIARFRRAALQAAEATGGADGGGEKGAAAVERVAKCYGFMWTFSVTKLHNTETSLFFPWLRDLVPKEVLPPLSEFDRERAGVVRIGEKIGQ 244          
BLAST of mRNA_H-canaliculatus_F_contig1303.2513.1 vs. uniprot
Match: A0A4D9CW14_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW14_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 3.010e-17
Identity = 53/145 (36.55%), Postives = 72/145 (49.66%), Query Frame = 0
Query:  123 ERVRDGKRRVQMQMMSMVSDASVDTKRFEDA-PVPVEDRGFHINGWRWHSRAVLRDVGRFRRAALLAXXXXXXXXXXXXXXAVERVAKCYGFMWKFSFTKLHKTETSLFFPWLRELVPREDLPPLSEFDREREGVVRIGKKIGQV 266
            ER RD        ++      SV      D  PVP  +R F INGWRWHSR+VLRDV RF+  A                    R+  CY F W FS+  L K E  +F+P+LR+ +P +  P L + +R+ E V  +G ++GQV
Sbjct:   12 ERCRDSSFHSSQFLLPSADSHSVFAPLHADVGPVPPSNRDFLINGWRWHSRSVLRDVRRFQEVAT-----RERQEVLRGVEGSSRLPACYDFFWSFSWVALLKIENQIFYPFLRKTLPSDLRPLLQDLERQGEEVTTLGLRLGQV 151          
BLAST of mRNA_H-canaliculatus_F_contig1303.2513.1 vs. uniprot
Match: K8YU62_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YU62_NANGC)

HSP 1 Score: 82.8 bits (203), Expect = 2.660e-14
Identity = 51/130 (39.23%), Postives = 65/130 (50.00%), Query Frame = 0
Query:  136 MMSMVSDASVDT-KRFED--------APVPVEDRGFHINGWRWHSRAVLRDVGRFRRAALLAXXXXXXXXXXXXXXAVERVAKCYGFMWKFSFTKLHKTETSLFFPWLRELVPREDLPPLSEFDREREGV 256
            MMS V DA     K F+          PVP  DR F INGWRWHSR+VLRDV RF+  A                    R+  CY F W FS+  L K E  +F+P+LR+ +P +  P L + +R+ E V
Sbjct:   48 MMSSVRDALASPQKAFQKQALVQSLLGPVPPSDRDFLINGWRWHSRSVLRDVRRFQEVAT-----RERQEVLRGVEGSSRLPACYDFFWSFSWVALLKIENQIFYPFLRKTLPSDLRPLLQDLERQGEEV 172          
BLAST of mRNA_H-canaliculatus_F_contig1303.2513.1 vs. uniprot
Match: A0A8J5XNY3_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XNY3_DIALT)

HSP 1 Score: 55.1 bits (131), Expect = 5.170e-5
Identity = 43/148 (29.05%), Postives = 60/148 (40.54%), Query Frame = 0
Query:  144 SVDTKR----FEDAPVPVEDRGFHINGWRWHSRAVLRDVGRFRRAALLAXXXXXXXXXXXXXXAVERVAKCYGFMWKFSFTKLHKTETSLFFPWLRELVPREDLPPLSEFDR----EREGVVRIGKKIGQVG-------SNVPVMLRE 276
            SVD  R     ED  VP  +R F INGW WH+  V   + R   A                      V   + ++W FS   L +TETSLF PW+R ++P    P +         E+   VR+  ++  +G       S+  V LR 
Sbjct:   34 SVDRMRASCELEDGLVPRAERRFLINGWHWHNLVVQLHLRRLADAL-----------RDDAPPTAAAVQHAWAYLWDFSARALGRTETSLFLPWMRSVLPDRHGPAVERLAALCAAEQARGVRLAARVRALGQSQKPLASSAAVQLRR 170          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1303.2513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K121_9PHAE6.600e-9074.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CW14_9STRA3.010e-1736.55Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8YU62_NANGC2.660e-1439.23Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A8J5XNY3_DIALT5.170e-529.05Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..307
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1303contigH-canaliculatus_F_contig1303:20638..25525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1303.2513.1mRNA_H-canaliculatus_F_contig1303.2513.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1303 20579..26118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1303.2513.1 ID=prot_H-canaliculatus_F_contig1303.2513.1|Name=mRNA_H-canaliculatus_F_contig1303.2513.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=308bp
MQRRGDSAVAIPGWRSIQTEDLMTTRGRRPRGGPRRWKLLTPTVLWSVVI
LAMAPSFYGFTGGLGGFPTSRSAGRSGAGGVAAADLASASAAGGTKGRRG
VGGTASTSSAKGSPFAAASWLKERVRDGKRRVQMQMMSMVSDASVDTKRF
EDAPVPVEDRGFHINGWRWHSRAVLRDVGRFRRAALLAAEASAGGEDDGG
AAAVERVAKCYGFMWKFSFTKLHKTETSLFFPWLRELVPREDLPPLSEFD
REREGVVRIGKKIGQVGSNVPVMLREIVIVSGLGYSWLFYLPSIGTEQQT
RVLSNER*
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