mRNA_H-canaliculatus_F_contig1022.241.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1022.241.1 vs. uniprot
Match: A0A6H5KTL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL5_9PHAE) HSP 1 Score: 304 bits (778), Expect = 6.330e-80 Identity = 666/1418 (46.97%), Postives = 731/1418 (51.55%), Query Frame = 1
Query: 781 EQLLEAIRRIPASLENIADLTTKQGLAMLEKRFSCSLTHHKKFIKTKLVEVVQAFV--------------------AARASXXXXXXXXXXXG-----------GEGDRAAP----------------SAGDSSDKELATPNEDDSDRDSSSSLSDEAGELAEMRMMPRPNARATSARMALAKAKINRAVRRAKAGGESDGSGDRSSSSESDLGSVRSGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDKYYLSPDDVAAD-----------KTTGAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAGGAEDGLAGLVDSDEEEAKEATAAASKDGADSTLVKAVVQEELDDVNEKKAEQRKNAAAERQRQLDALRVMNAAQLREATRAQQGTLLAKIKERQDVVHAALVANAKEELKALRAEARKAAGITGEEGEEXXXXXXXXGGGXXXXXXXXXXXXXXXXXXXXXEESAVAAAAAKSAFRNSEGQEDVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SELEIVPANPKAALAALMGGQKKVRAAVGDGGAAAASAKNKGXXXXXXXVGETAAGGVAG----------ARALAALPKGMRFSSPKAADKSRNANRRRLAASARVVASDRWAAQLGFRDGQEHIRELKFKEIERRREAHKQRERKKKESEALAARLVEYAKHADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVDADGATMRAAQGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKTLESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAA----------------------------------RAKIVRTYGRKISSRDSADGHDG-----GAPADPSASNAADEGGSDAPLTGAKSAMTVESQALWAEE-DGIGEQTELAGMAGESLGDEDSGGLSLGLDDFGDGDSDXXXXXXXXXXXXXXXXAAAAEQVTAPPSAGGDGRQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKAXXXXXXXXXXXXXXX-------SFVKMKIAAGGGLEAAPVQPSLSNFFQKGAGSTAPASAAAGVVPPAKKSKGI--------AAFFGAAGKDAPAASAAVLGVATAKGSTAEDSSVAPLGAGDGKSTGTAGAPPAGAQVPEPPFAEDSDDRPAVAGAAXXXXXXXXXXXRREETAGEAADREGKEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXKEPKDRAAKYRAMLEAERAASKKAKKLRKSGMMDXXXXXXXXXXAVRGLGDFGFGVPAGGTGTSAAGXXXXXXXXXXXVDEEIREE 4656
E LLEA+R +P +E + LT KQ +AMLEKRFSCSL H KKFIK +L EVVQA + A+ +SXXXXXXXXXXX GE +A+ S D K+ T ++D SD SSLSD+AGELA+M +MPRP+AR TSAR AL KAK+ RA+RRAK G S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K G+KG XXXXXXXXXXXXXXXXXX EA S +VKAVVQEELDD NEKKA +RK AAAERQRQLDALRVMNAAQL+E TRAQQGTLLAKIKERQD + AA+VANAK+ELKALRAEARKAAGIT EE XXXXXXXXXXXXXXXX + EG + EE XXXXXXXXXXXXXXXXXX XXXX SELEI+PA+P AAL AL+G Q XXXXXXX RALAALPKGMRFSSPKAADKSRNANR+RLAASAR VASDRWAAQLGFRDGQEHIRELK ESEALAA+L+EYAKHADED A D D A A + + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + E XXXXXXXXXXXXXXXXXXXXXXX AAA R KI+RTYGRK +SR S D DG G+ A A G KS MT ESQALW EE D GE+ + G + EDS SL LDD D XXXXXXXXXXXXXXX A + + P DG Q X XXXXXXXXXXXXXXX SFVKMK+ A G L+ AP QPSLSNFFQKGAG PA AA AAFFG + DAP A+ V+ +G+ +++A AG G + A + EP AE S + PA XXXXXXXXXXX E+ G+AAD E XXXXXX KEPKDR+AKYRAMLEAER A+KKAKKLRKSGMM XXXXXXXXXXAVRGLGDFGFGVP GGTGTSAAGXXXXXXXXXXX+D+EIREE
Sbjct: 176 ESLLEAMRGVPGDVEGVGKLTPKQVIAMLEKRFSCSLEHRKKFIKAELAEVVQAALGDXXXXXXXXXGSFLRLPPTASLSSXXXXXXXXXXXXXXXSDCGDASEGEQQKASXXPEDSDHEATAALDHDSEQDGQKKQQPTSDQDSSDNGLESSLSDDAGELADMPVMPRPDARKTSARRALTKAKVKRAIRRAKKGTVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREGSKGKKGNGRGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAP------------SKVVKAVVQEELDDANEKKAAERKKAAAERQRQLDALRVMNAAQLKEVTRAQQGTLLAKIKERQDALRAAIVANAKKELKALRAEARKAAGITEEE------------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGLEVEGVVEKEERAVXXXXXXXXXXXXXXXXXXKDSDFATKAKGPSKGTLVPAEHGSASGESGSXXXXXXXSELEILPADPTAALRALVGRQHSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRALAALPKGMRFSSPKAADKSRNANRKRLAASARTVASDRWAAQLGFRDGQEHIRELK-------------------ESEALAAQLLEYAKHADEDEEEFGATGETTSGAAAST-----------AADGDRAEGAAPKVDAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPSSPKKSDSQGVSSRAAEPTAEAVXXXXXXXXXXXXXXXXXXXXXXXQQNEERSEPKPSPAEGVAGVPEPDSEDGDKFGDAATCTAAAXXXXXXXXXPXXXXXXXXXXXVVVPLAPAAPPIPRPKIMRTYGRKQTSRHSEDAADGAGALAGSAAXXXXXXXXXXXXXXAGAGGKKSTMTAESQALWEEEEDEEGEELPASPRVGGASLVEDSCTFSLALDDLSDXXXXXXXXXXXXXXXXXXXSAVSLSVPSKPDDGDDDGGQAEAGAKRKLERPAGDGSTDDAADSGVATATAITEARTASGXXXXXXXXXXXXXXXXXXXXXXXTGSSFVKMKLKADGELKTAPTQPSLSNFFQKGAG---PALAAESXXXXXXXXXXXXXXXXXXXAAFFGDSSNDAPVAAPEVV---VPEGTPEGGATIASDEAGVGDTVSVAAXXXXXXKETEPSAAE-SKNNPAAXXXXXXXXXXXXXXX--EDANGDAADDEAX--------------------XXXXXXGEEPKEPKDRSAKYRAMLEAERIATKKAKKLRKSGMMXXXXXXXXXXXAVRGLGDFGFGVPGGGTGTSAAGXXXXXXXXXXXIDDEIREE 1504
BLAST of mRNA_H-canaliculatus_F_contig1022.241.1 vs. uniprot
Match: D8LK00_ECTSI (DEK C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK00_ECTSI) HSP 1 Score: 198 bits (503), Expect = 3.340e-47 Identity = 625/1411 (44.29%), Postives = 696/1411 (49.33%), Query Frame = 1
Query: 781 EQLLEAIRRIPASLENIADLTTKQGLAMLEKRFSCSLTHHKKFIKTKLVEVVQAFVAARASXXXXXXXXXXXGGEG----------------DRAAPSAGDSSDKELATPNEDDSDRDSS-----SSLSDEAGELAEMRMMPRPNARATSARMALAKAKINRAVRRAKAGGESDGSGDRSSSSESDLGSVRSGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDKYYLSPDDV--------AADKTTGAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAGGAEDGLAGLVDSDEEEAKEATAAASKDGADSTLVKAVVQEELDDVNEKKAEQRKNAAAERQRQLDALRVMNAAQLREATRAQQGTLLAKIKERQDVVHAALVANAKEELKALRAEARKAAGITGEEGEEXXXXXXXXGGGXXXXXXXXXXXXXXXXXXXXXEESAVAAAAAKSAFRNSEGQEDVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSELEIVPANP-KAALAALMGGQKKVRAAVGDGGAAAASAKNKGXXXXXXXVGETAAGGVAG---ARALAALPKGM---RFSSPKAADKSR--NANRRRLAASARVVASDRWAAQLGFRDGQEHIRELKFKEIERRREAHKQRERKKKESEALAARLVEYAKHADEDXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAV------------------------------------------DADGATMRAAQGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKTLESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAARAKIVRTYGRKISSRDSADGHDGGAPADPSASNAADEGG--SDAPLTGA---KSAMTVESQALWAEE-DGIGEQTELAGMA-GESLGDEDSGGLSLGLDDFGDGDSDXXXXXXXXXXXXXXXXA-----------------------AAAEQVTAPPSAGGDGRQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKAXXXXXXXXXXXXXXXSFVKMKIAAGGGLEAAPVQPSLSNFFQKGAGSTAPASAAAGVVPPAKKSK-----GIAAFFGAAGKDAPAASAAVLGVATAKGSTAEDSSVAPLGAGDGKSTGTAGAPPAGAQVPEPPFAEDSDDRPAVAGAAXXXXXXXXXXXRREETAGEAADREGKEGEXXXXXXXXXXXXXXXXXXXXXXXXXXX----KEPKDRAAKYRAMLEAERAASKKAKKLRKSGMMDXXXXXXXXXXAVRGLGDFGFGVPAGGTGTSAAGXXXXXXXXXXXVDEEIREE 4656
E LLEAIR IP +E+I LT KQ +AMLEKRFSCSL H KKFIK +LVEVVQA + S XXXXXXXXXX GE D A + SD+E + SD+DSS SSLSD+AGEL +M +MPRP+ R TSAR ALAKAK+ RA+RRAK G S XXXXXXXXXXXXX XXXXXXXXXXXXXXXXX K G+KG XXXXXXXX K G A++G + LVDSDE KE D A S +VKAVVQEELDD NEKKA +R RQRQLDALRVMNAAQL+EATRAQQGTLLAKIKERQD ELK+LRAEARKAAGIT XXXXXXXXXXXXX + V A EG + EE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S+ + P K AL G A SA + XXXXXXX A G RA +G R SP A + R ++AS+R++ +R G +FKEIERRREAHK+RERKKKE+EALAA+L+EYAKHADED XXXXXXXXXXXXXXX D+ G + AA+ +++ E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R KIVRTYGRK +SR S D DG SA+ GG +D P GA KS MT ESQALW EE D GE+ + A G SL EDS SL LDDF D XXXXXXXXXXXXXXXX A ++ PP+ GDG XXXX XXXXXXXXXXX SFVK K+ A G LE AP QPSLSNFFQKGAG + A +A GIAAFFG +G D PAA+ +V P G +G+ST + +++ D V+ AAXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX KEPKDR+AKYRAMLEAERA XXXXXXXXXXAVRGLGDFGFGVPAGGTGTSAAG XXXXXXX+D+EIREE
Sbjct: 169 ESLLEAIRGIPGEVEDIGKLTAKQVIAMLEKRFSCSLEHRKKFIKAELVEVVQAALGDGESSXXXXXXXXXXVGEASEGEQQXXSSSPEDSDDEATAALDKESDQEGQKKQQPTSDQDSSDNGLESSLSDDAGELEDMPVMPRPDPRKTSARRALAKAKVKRAIRRAKTGTVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTKKKPEGSKGKKSNGRGASAKATKXXXXXXXX------KKGAADEGGSDLVDSDE--GKEEAGVEGADEAPSKVVKAVVQEELDDANEKKAAERXXXXXXRQRQLDALRVMNAAQLKEATRAQQGTLLAKIKERQDAXXXXXXXXXXXELKSLRAEARKAAGIT------------------------EXXXXXXXXXXXXXXKGEVEGGAGGMEV---EGMVEKEERAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---------------------SDFAMKAKGPTKGAL----------------GPAEQGSASGEXXXXXXXXXXXEACGSAPPRPPTRAATQTERGWPRARAPSPATAGPRSWVSGTGRSISASSRLLRMERGGGSTG-----------RFKEIERRREAHKERERKKKETEALAAQLLEYAKHADEDEEEFGATGETSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKKSDSQGVSSTAAE----------------------PTAETVPGGSTEASRQEEPIAAYEAVESAKQQNEERGEPKPSPAEGVAGVPEPASGDGDKPGDAATGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPIPRPKIVRTYGRKQTSRGSEDAADGEGFLAGSAAPGGAPGGRAADGPAAGAGGKKSTMTAESQALWEEEEDEEGEELPASPRAAGASLA-EDSCTFSLALDDFSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSEAGTKRKLEPPA--GDGSS---DDAADSGVATETAITEARTASGTSPTEGDSTAPAXXXXXXXXXXXXXXXXXXATGSSFVKKKLKADGELETAPTQPSLSNFFQKGAGPASAAELSAXXXXXXXXXXXXXXTGIAAFFGDSGNDVPAAA---------------PEAVVPEGTPEGRSTIAS---------------DEAGDGDTVSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKEPKDRSAKYRAMLEAERAXXXXXXXXXXXXXXXXXXXXXXXXXAVRGLGDFGFGVPAGGTGTSAAGGAKKXXXXXXXIDDEIREE 1438
BLAST of mRNA_H-canaliculatus_F_contig1022.241.1 vs. uniprot
Match: A0A836CKU5_9STRA (DEK C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKU5_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 3.500e-7 Identity = 44/65 (67.69%), Postives = 52/65 (80.00%), Query Frame = 1
Query: 4405 PKDRAAKYRAMLEAERAASKKAKKLRKSGMMDXXXXXXXXXXAVRGLGDFGFGVPAGGTGTSAAG 4599
PKDRAA+YRAMLEA+R A+K+AK+L KSG+ D XXXXXXXAV+GLGDFGFG+ GG G G
Sbjct: 1214 PKDRAARYRAMLEADRKAAKRAKRLGKSGIADEEAXXXXXXXAVKGLGDFGFGLGKGGVGGEKGG 1278 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1022.241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1022.241.1 >prot_H-canaliculatus_F_contig1022.241.1 ID=prot_H-canaliculatus_F_contig1022.241.1|Name=mRNA_H-canaliculatus_F_contig1022.241.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1559bp MSSHTPDSLCEGTIAQHMDPDLDQQKNHHQQQQQQSPNETAPRHGLESEEback to top mRNA from alignment at H-canaliculatus_F_contig1022:24264..31211+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1022.241.1 ID=mRNA_H-canaliculatus_F_contig1022.241.1|Name=mRNA_H-canaliculatus_F_contig1022.241.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6948bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1022:24264..31211+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1022:24264..31211+ >mRNA_H-canaliculatus_F_contig1022.241.1 ID=mRNA_H-canaliculatus_F_contig1022.241.1|Name=mRNA_H-canaliculatus_F_contig1022.241.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=9354bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1022:24264..31211+ (Hapterophycus canaliculatus Oshoro5f female)back to top |