mRNA_H-canaliculatus_F_contig12716.2265.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12716.2265.1
Unique NamemRNA_H-canaliculatus_F_contig12716.2265.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Match: A0A6H5L1Y5_9PHAE (MGS-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1Y5_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 4.050e-103
Identity = 167/180 (92.78%), Postives = 168/180 (93.33%), Query Frame = 1
Query:    1 GTAVDAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPDQYPAVMAEMKANVSESGAGRCGARRT 540
            G AVD VKVTRALLSVSDK GLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSP+QYPAVMAEMKAN    G    G RRT
Sbjct:   10 GAAVDTVKVTRALLSVSDKDGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPEQYPAVMAEMKAN---DGCTPLGTRRT 186          
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Match: A0A836CED7_9STRA (Putative bifunctional purine synthesis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CED7_9STRA)

HSP 1 Score: 251 bits (641), Expect = 2.910e-77
Identity = 131/180 (72.78%), Postives = 143/180 (79.44%), Query Frame = 1
Query:    1 GTAVDAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPDQYPAVMAEMKANVSESGAG---RCGA 531
            G   D VK+TRALLSVSDK+GL+E A  LA HGVELLSTGGTAKA+RAA L  TDVS+YTG PE+MDGRVKTLHP VHGGIM+VRGN  HE+    QG+K IDLVVLNLYPFEATVAKGS FDTCIENIDIGGPSMLRSSAKNH+YV I TSP QYP +MAEM A    +      RC A
Sbjct:   10 GDQADEVKITRALLSVSDKAGLIEFAKFLAQHGVELLSTGGTAKALRAANLDCTDVSDYTGHPEIMDGRVKTLHPKVHGGIMNVRGNAAHEKDKAEQGIKNIDLVVLNLYPFEATVAKGSDFDTCIENIDIGGPSMLRSSAKNHRYVVISTSPSQYPEIMAEMAAKAGATSLALRRRCAA 189          
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Match: A0A7S1UAS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAS9_9STRA)

HSP 1 Score: 236 bits (601), Expect = 6.670e-76
Identity = 124/179 (69.27%), Postives = 142/179 (79.33%), Query Frame = 1
Query:    1 GTAVDAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPDQYPAVMAEMKANVSESGAGRCGARR 537
            G A+D + V RALLSVSDK+GLV  AT LASHGVELLSTGGTAK +R AGLTV DVSEYT  PEMMDGRVKTLHP VHGGI++VRGN +HE  +++ G K ID++VLNLYPFEATVA G+ FD CIENIDIGGPSMLRS++KNHKYV I TSP QY  ++AEM    S+ GA     RR
Sbjct:   10 GAALDEIPVRRALLSVSDKTGLVPFATKLASHGVELLSTGGTAKKLREAGLTVIDVSEYTQAPEMMDGRVKTLHPLVHGGILYVRGNAQHEADLEANGGKPIDMIVLNLYPFEATVASGAAFDHCIENIDIGGPSMLRSASKNHKYVGIVTSPSQYDEIVAEMD---SKGGATTLALRR 185          
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Match: A0A7S3RUH9_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RUH9_EMIHU)

HSP 1 Score: 226 bits (577), Expect = 1.100e-72
Identity = 115/160 (71.88%), Postives = 130/160 (81.25%), Query Frame = 1
Query:   13 DAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPDQYPAVMAEMK 492
            D V V RALLSVSDK+GLVELA  L   GVELLSTGGTAK +R AG+ V DVSEYTGFPEM+DGRVKTLHP VHGG++ VRGN  HE AM   G+  IDLV++NLY FEATVAKGS F+TCIENIDIGGPSMLRSSAKNHK VT+C  P +Y  ++A+MK
Sbjct:    3 DLVHVKRALLSVSDKTGLVELAKFLHEKGVELLSTGGTAKTIREAGMPVKDVSEYTGFPEMLDGRVKTLHPKVHGGLLGVRGNAAHEAAMAEHGIGNIDLVIVNLYAFEATVAKGSNFETCIENIDIGGPSMLRSSAKNHKAVTVCVDPSRYGEIIADMK 162          
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Match: F0XXE0_AURAN (MGS-like domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=F0XXE0_AURAN)

HSP 1 Score: 238 bits (606), Expect = 5.330e-72
Identity = 119/166 (71.69%), Postives = 137/166 (82.53%), Query Frame = 1
Query:    1 GTAVDAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPDQYPAVMAEMKAN 498
            G ++D +K+ RALLSVSDK+GLVEL   L SHGVELLSTGGTA A+R AG+ VTDV++YTGFPEM+ GRVKTLHP VHGGIM+VRGN EHE ++   G+K IDLVVLNLY FEATVAKGS F TC+EN+DIGGPSMLRSSAKNH YV I TSPDQY A+   M A+
Sbjct:   11 GDSLDVIKIRRALLSVSDKTGLVELGLKLQSHGVELLSTGGTAAALRGAGIPVTDVADYTGFPEMLGGRVKTLHPKVHGGIMYVRGNAEHEASIAEAGIKGIDLVVLNLYAFEATVAKGSDFATCVENVDIGGPSMLRSSAKNHAYVAIATSPDQYGALTEAMDAS 176          
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Match: A0A7S4E539_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E539_9STRA)

HSP 1 Score: 238 bits (608), Expect = 5.830e-72
Identity = 118/163 (72.39%), Postives = 140/163 (85.89%), Query Frame = 1
Query:    1 GTAVDAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPDQYPAVMAEM 489
            GT  D+V + RALLSVSDK+GLVEL  +LA+  VELLSTGGTAKA+RAAGLTV DV++YTGFPEM+ GRVKTLHP VHGGIM+VRGN EHE ++K  G+K IDLVVLNLY FEATVAKGS F+TC+EN+DIGGPSMLRSSAKNH+YVTI T+P QY  +++ +
Sbjct:   51 GTQADSVPIKRALLSVSDKTGLVELGKALAAKNVELLSTGGTAKALRAAGLTVQDVADYTGFPEMLGGRVKTLHPKVHGGIMYVRGNAEHEASVKEAGIKGIDLVVLNLYAFEATVAKGSDFETCVENVDIGGPSMLRSSAKNHRYVTIATAPSQYAELISAL 213          
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Match: D8LYE8_BLAHO (MGS-like domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LYE8_BLAHO)

HSP 1 Score: 236 bits (601), Expect = 2.480e-71
Identity = 123/164 (75.00%), Postives = 135/164 (82.32%), Query Frame = 1
Query:    1 GTAVDAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPDQYPAVMAEMK 492
            GT     KV RA+LSVSDK+GLV+LA  L S+GVELLSTGGTAKAMR AG+ V DVSEYTG PEMMDGRVKTLHP VHGGI+ VRGNE+HE+ MK  G+K IDLVVLNLY FE TVAKG  F+TCIENIDIGGPSMLRSSAKNH  V IC+SP QY A+M EMK
Sbjct:   10 GTTQSLFKVERAILSVSDKTGLVDLAKFLESYGVELLSTGGTAKAMRDAGVKVMDVSEYTGAPEMMDGRVKTLHPKVHGGILAVRGNEKHEKDMKDNGIKKIDLVVLNLYAFEDTVAKGYNFETCIENIDIGGPSMLRSSAKNHAAVVICSSPSQYAALMEEMK 173          
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Match: A0A196SEJ8_BLAHN (Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase n=2 Tax=Blastocystis sp. subtypes TaxID=944171 RepID=A0A196SEJ8_BLAHN)

HSP 1 Score: 235 bits (600), Expect = 3.490e-71
Identity = 121/164 (73.78%), Postives = 135/164 (82.32%), Query Frame = 1
Query:    1 GTAVDAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPDQYPAVMAEMK 492
            GT     K+ RA+LSVSDK+GLV+LA  L S+GVE+LSTGGTAKAMR AG+ V DVSEYTG PEMMDGRVKTLHP VHGGI+ VRGN +HE+ MK  G+K IDLVVLNLY FE TVAKG  F+TCIENIDIGGPSMLRSSAKNH  V IC+SP QYPA+M EMK
Sbjct:   10 GTTQSLFKINRAILSVSDKTGLVDLAKFLESYGVEILSTGGTAKAMRDAGVKVMDVSEYTGAPEMMDGRVKTLHPKVHGGILAVRGNAKHEQDMKDNGIKMIDLVVLNLYAFEDTVAKGYNFETCIENIDIGGPSMLRSSAKNHAAVVICSSPAQYPALMEEMK 173          
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Match: A0A6S9H1W5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H1W5_HETAK)

HSP 1 Score: 234 bits (598), Expect = 6.210e-71
Identity = 120/170 (70.59%), Postives = 140/170 (82.35%), Query Frame = 1
Query:    1 GTAVDAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPDQYPAVMAEMKANVSES 510
            G  VD VKV RALLSVSDK+G+V+LA  LAS GVELLSTGGTA A+R AGL V DVSEYT  PEMMDGRVKTLHP VHGG+++VRGN +HE   ++ G++AIDLVVLNLYPFE TVA G+ FD CIENIDIGGPSMLRSS+KNHKYV I T+PDQY  +MA+M+ N  ++
Sbjct:   10 GAEVDKVKVNRALLSVSDKTGVVDLAKFLASKGVELLSTGGTANAIRNAGLEVKDVSEYTQAPEMMDGRVKTLHPKVHGGLLYVRGNAQHEADCEANGVQAIDLVVLNLYPFEQTVAGGADFDNCIENIDIGGPSMLRSSSKNHKYVVIATAPDQYAELMAQMEENEGQT 179          
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Match: K3XDM7_GLOUD (MGS-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XDM7_GLOUD)

HSP 1 Score: 233 bits (593), Expect = 3.770e-70
Identity = 118/166 (71.08%), Postives = 136/166 (81.93%), Query Frame = 1
Query:    1 GTAVDAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAGLTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMKAIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTICTSPDQYPAVMAEMKAN 498
            G+ V  V + RALLSVSDK+G++ELA  L+ HGVELLSTGGTAKA+R A L V DVSEYTG PEMMDGRVKTLHP +HGG++ VRGN +HE+ M + G+K IDLVVLNLY FEA VA G+ FDTCIENIDIGGPSMLRSSAKNHK V ICTSP QYP ++ E+ AN
Sbjct:   12 GSTVSLVPIRRALLSVSDKTGVIELAKFLSHHGVELLSTGGTAKAIRDAQLPVIDVSEYTGAPEMMDGRVKTLHPKIHGGLLGVRGNAQHEQDMANNGVKPIDLVVLNLYAFEAAVATGANFDTCIENIDIGGPSMLRSSAKNHKSVVICTSPAQYPELIQELTAN 177          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12716.2265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1Y5_9PHAE4.050e-10392.78MGS-like domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CED7_9STRA2.910e-7772.78Putative bifunctional purine synthesis protein n=1... [more]
A0A7S1UAS9_9STRA6.670e-7669.27Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3RUH9_EMIHU1.100e-7271.88Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
F0XXE0_AURAN5.330e-7271.69MGS-like domain-containing protein n=2 Tax=cellula... [more]
A0A7S4E539_9STRA5.830e-7272.39Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
D8LYE8_BLAHO2.480e-7175.00MGS-like domain-containing protein n=1 Tax=Blastoc... [more]
A0A196SEJ8_BLAHN3.490e-7173.78Phosphoribosylaminoimidazolecarboxamide formyltran... [more]
A0A6S9H1W5_HETAK6.210e-7170.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3XDM7_GLOUD3.770e-7071.08MGS-like domain-containing protein n=1 Tax=Globisp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12716contigH-canaliculatus_F_contig12716:388..3046 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score321.6
Seed ortholog evalue2.4e-85
Seed eggNOG ortholog2880.D8LKS8
Preferred nameATIC
KEGG rclassRC00026,RC00263,RC00456
KEGG koko:K00602,ko:K06943
KEGG ReactionR01127,R04560
KEGG Pathwayko00230,ko00670,ko01100,ko01110,ko01130,ko01523,ko03008,map00230,map00670,map01100,map01110,map01130,map01523,map03008
KEGG ModuleM00048
GOsGO:0000003,GO:0003006,GO:0003360,GO:0003674,GO:0003824,GO:0003937,GO:0004643,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006760,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007049,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0009058,GO:0009060,GO:0009108,GO:0009116,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009235,GO:0009259,GO:0009260,GO:0009396,GO:0009611,GO:0009653,GO:0009987,GO:0010035,GO:0015980,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0016742,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019238,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0019953,GO:0021537,GO:0021543,GO:0021549,GO:0021987,GO:0022037,GO:0022402,GO:0022413,GO:0022414,GO:0030154,GO:0030435,GO:0030437,GO:0030900,GO:0030902,GO:0031099,GO:0031100,GO:0032501,GO:0032502,GO:0032505,GO:0033013,GO:0034293,GO:0034641,GO:0034654,GO:0042060,GO:0042221,GO:0042398,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043934,GO:0043935,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045333,GO:0046040,GO:0046390,GO:0046394,GO:0046452,GO:0046483,GO:0046653,GO:0046654,GO:0046983,GO:0048468,GO:0048513,GO:0048646,GO:0048731,GO:0048856,GO:0048869,GO:0050896,GO:0051186,GO:0051188,GO:0051321,GO:0051704,GO:0055086,GO:0055114,GO:0060322,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1903046
EggNOG free text desc.IMP cyclohydrolase activity
EggNOG OGsCOG0138@1,KOG2555@2759
EC2.1.2.3,3.5.4.10
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko04147
Hectar predicted targeting categoryother localisation
Exons4
Model size567
Cds size567
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12716.2265.1prot_H-canaliculatus_F_contig12716.2265.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12716 388..3046 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928993.130246-CDS-H-canaliculatus_F_contig12716:387..5381622928993.130246-CDS-H-canaliculatus_F_contig12716:387..538Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12716 388..538 -
1696845641.998335-CDS-H-canaliculatus_F_contig12716:387..5381696845641.998335-CDS-H-canaliculatus_F_contig12716:387..538Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12716 388..538 -
1622928993.1429582-CDS-H-canaliculatus_F_contig12716:1038..11541622928993.1429582-CDS-H-canaliculatus_F_contig12716:1038..1154Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12716 1039..1154 -
1696845642.0109239-CDS-H-canaliculatus_F_contig12716:1038..11541696845642.0109239-CDS-H-canaliculatus_F_contig12716:1038..1154Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12716 1039..1154 -
1622928993.1537268-CDS-H-canaliculatus_F_contig12716:2092..22271622928993.1537268-CDS-H-canaliculatus_F_contig12716:2092..2227Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12716 2093..2227 -
1696845642.019418-CDS-H-canaliculatus_F_contig12716:2092..22271696845642.019418-CDS-H-canaliculatus_F_contig12716:2092..2227Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12716 2093..2227 -
1622928993.1639826-CDS-H-canaliculatus_F_contig12716:2881..30461622928993.1639826-CDS-H-canaliculatus_F_contig12716:2881..3046Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12716 2882..3046 -
1696845642.0300853-CDS-H-canaliculatus_F_contig12716:2881..30461696845642.0300853-CDS-H-canaliculatus_F_contig12716:2881..3046Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12716 2882..3046 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12716.2265.1

>prot_H-canaliculatus_F_contig12716.2265.1 ID=prot_H-canaliculatus_F_contig12716.2265.1|Name=mRNA_H-canaliculatus_F_contig12716.2265.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=189bp
GTAVDAVKVTRALLSVSDKSGLVELATSLASHGVELLSTGGTAKAMRAAG
LTVTDVSEYTGFPEMMDGRVKTLHPSVHGGIMHVRGNEEHEEAMKSQGMK
AIDLVVLNLYPFEATVAKGSGFDTCIENIDIGGPSMLRSSAKNHKYVTIC
TSPDQYPAVMAEMKANVSESGAGRCGARRTASPAPPRR*
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mRNA from alignment at H-canaliculatus_F_contig12716:388..3046-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12716.2265.1 ID=mRNA_H-canaliculatus_F_contig12716.2265.1|Name=mRNA_H-canaliculatus_F_contig12716.2265.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2659bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12716:388..3046- (Hapterophycus canaliculatus Oshoro5f female)
GGGACGGCCGTGGACGCCGTCAAGGTCACCCGCGCCCTCCTCTCGGTGTC GGACAAGTCCGGCCTGGTGGAGTTGGCGACCTCTCTGGCCTCCCACGGCG TGGAACTCCTGTCCACGGGGGGCACGGCCAAGGCCATGCGCGCGGCCGGG CTGACGGTTACTGACGTGAGTACCTGGCAGAGATTGAGAGATGTGGACGT GGCAGAGGCGGGTCTGTGAATGTGGCCGAGATTGTCGAGATGCGTATCGC GTGTGGGTGGCGCTGGTCGATGGTATCTTCGTAGATCGAAGTGTGGCGGC TGTGGGGAAGCGTTCATGACTAGTTTAAATAGGAGCACTTTTACTGTGCA CCCGCCGCCGCCGCTGCCGACGCAGGTCATGCGACGGTTCGCTTCTTGTG CATACCTTTTAGGCGTCTTTTCTCGATGGAAACTGAACGAGCCTTTGCCT GAGCTTGATCCCTGAAGTTGGCCGTGTGCCGGTCAGCGTCAGTGGCGAGA AAGCGGCCGCGTCGGCGATCGTTGCCGCTCCAACCACACGCTGCTTGCGC GAGATTTCCCGTTTGCTGCCGTATTCTGCTGCGGTGCGAGCAATGGCGAG CGCGGGCGGCGAAGGTGCTTGGACGTCAGAAACAGCCCTAGTTGAAGAAA AACTTACGAAATCCTGTTCGAGCTTGGATATTGTGTGGAGTCGATGTCAA AATCCAAGCACCGGCAGGAGCGATAGCAGTGGCACCGATAATCGAGAGCC GAGATAACCAAAACAAGGCGAACCAAGAGCTGAGGCAAGCGAACGGAACG GGTGCACGTGTTGTCGCAGGTGTCCGAATACACCGGGTTTCCGGAGATGA TGGACGGCCGCGTCAAGACCTTGCACCCCAGCGTGCACGGCGGCATCATG CACGTCCGGGGGAACGAGGAGCACGAGGAGGCCATGAAATCTCAGGGGAT GAAGGTTAGAGAGGACGTGCAAAATTAAATGGGTGCTTGTTCGATGCTTC GCCTCGAGGTCAGTCGGCCGGTCGACCAATTTGCGGCTCTTGCTGCTGCG AGACGATTTGCATCCGCTCCTGGGGTTGATGTCGGGGAGGGGGGGGGGCG AGGAGGGGATTATGAAAGCTTTGGGTGGACTTCTAGCGTTCCTGATCCCC TCTTGCATGCGGGGGCGCCGCGAAACACGGTCGCTCCAGGTTCGAAGGTA AGCTAGATCCACGCGAGCGGACGTGGCATGTGGAACATCGCCACGGAGGC GGAGGGCTGGGCCACTCGCGTTCCTTGTCTCCACATCTCGTGGCGCATCG TGCCTTGGGTCTCACGCCGTGAATCCCACGGGAGAGGTCCGTGGCACTTC GTAGGGCTGCATGCAACGCCAGGAGAGTACATGGAGGGGCACAGGAAGGA CGCATATGTGCGTACTCCGTCAAGAAGCCAGGTTTCCATCGCAAGCCCGT GCCCAGCCTGGGTCGAAACCCCCACACGAAGCAAGCAAGCGAGGCGGTTC CTCAGAGGGTGGGTTCCTGCTTCAAACCTCGCTCCAGCTCCCTCTCCCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTTTCTCTTCTTCGGAGCGGT TTCGGCCCTTCACGTGTGCCTCCCCGCTTTTGTCGGAGACAACAGCCGTG CTTCATTTCGCAGAAGAGACTTACCCCCAAGACAGGATTCCAGAGGAGAT TCTCGAGTTCATCGATGCGCTGGTTCGTTCGGGCCGATCGGAATTCGGAC GAGTCCGCTTCAACCCGACGTGTAAATCGCTTTGGAAGTGGTGTACTACG GTGAAAATACGGTTTTCCGTCTGGTTCTTTGTTCCTCCGTTTTATTTGTT ATTTATCAAGTTATACACGCTGTTGCCCGCCTGTTAATGAAGGCCATCGA CTTGGTGGTGCTCAACCTGTACCCGTTCGAGGCCACCGTTGCCAAGGGCA GCGGGTTCGACACGTGCATCGAGAACATCGACATCGGGGGACCGTCCATG CTGCGTAGGTGAGCAGTGAGGGCGGCCGTTGCCTTGATCGCCGCCGCCCT GCGTCGTCGTTGTTTCTATGCCTGCGTCTCTCGGTGTTACCCTTGGCGGG GAAAATTGCGGGGGGCTGGAAAACCCGCGGCCTCGCACGCCTTCCCCCGC TCCTCAGGCAACGCTGCTGTGTCTCACCGTTGACTTTAGGGTCTTCCCAG CTCTGGGGGGCTTCGAAACCTGCCCCATTGCGCCCATCTGACGAGCTCGA AACATCCATCCCTCCCCCCCGCCCCCGCGCGCGCTCTAGGTTCCCCTCCT CATCTAAACAACTCCCAACGGATCGTCCACTCATTGTCTCAATCCTTCCT CCCCAACCCGCCTCCGACCGTTCTCGTCTTAAGGTCGCCCCTCCCGTGGT CCTCGTCTTCTCTCTCCTCTGTCTTCTTTCGTCCCTTCGCCGTTTTCATT TTCGTCTCCTTGTCTTTTCGTCTCCTCGTCTCTTACTTCCGCGCCCTTGG TCCCGCAGCTCTGCCAAGAACCACAAGTACGTGACGATCTGCACCAGCCC GGACCAGTACCCGGCGGTCATGGCGGAGATGAAAGCGAACGTGAGCGAGA GTGGGGCGGGGCGGTGCGGGGCGAGGAGAACAGCATCCCCCGCGCCGCCG CGTCGATAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12716:388..3046-

>mRNA_H-canaliculatus_F_contig12716.2265.1 ID=mRNA_H-canaliculatus_F_contig12716.2265.1|Name=mRNA_H-canaliculatus_F_contig12716.2265.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1134bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12716:388..3046- (Hapterophycus canaliculatus Oshoro5f female)
GGGACGGCCGTGGACGCCGTCAAGGTCACCCGCGCCCTCCTCTCGGTGTC
GGACAAGTCCGGCCTGGTGGAGTTGGCGACCTCTCTGGCCTCCCACGGCG
TGGAACTCCTGTCCACGGGGGGCACGGCCAAGGCCATGCGCGCGGCCGGG
CTGACGGTTACTGACGGGACGGCCGTGGACGCCGTCAAGGTCACCCGCGC
CCTCCTCTCGGTGTCGGACAAGTCCGGCCTGGTGGAGTTGGCGACCTCTC
TGGCCTCCCACGGCGTGGAACTCCTGTCCACGGGGGGCACGGCCAAGGCC
ATGCGCGCGGCCGGGCTGACGGTTACTGACGTGTCCGAATACACCGGGTT
TCCGGAGATGATGGACGGCCGCGTCAAGACCTTGCACCCCAGCGTGCACG
GCGGCATCATGCACGTCCGGGGGAACGAGGAGCACGAGGAGGCCATGAAA
TCTCAGGGGATGAAGGTGTCCGAATACACCGGGTTTCCGGAGATGATGGA
CGGCCGCGTCAAGACCTTGCACCCCAGCGTGCACGGCGGCATCATGCACG
TCCGGGGGAACGAGGAGCACGAGGAGGCCATGAAATCTCAGGGGATGAAG
GCCATCGACTTGGTGGTGCTCAACCTGTACCCGTTCGAGGCCACCGTTGC
CAAGGGCAGCGGGTTCGACACGTGCATCGAGAACATCGACATCGGGGGAC
CGTCCATGCTGCGTAGGCCATCGACTTGGTGGTGCTCAACCTGTACCCGT
TCGAGGCCACCGTTGCCAAGGGCAGCGGGTTCGACACGTGCATCGAGAAC
ATCGACATCGGGGGACCGTCCATGCTGCGTAGCTCTGCCAAGAACCACAA
GTACGTGACGATCTGCACCAGCCCGGACCAGTACCCGGCGGTCATGGCGG
AGATGAAAGCGAACGTGAGCGAGAGTGGGGCGGGGCGGTGCGGGGCGAGG
AGAACAGCATCCCCCGCGCCGCCGCGTCGATAGCTCTGCCAAGAACCACA
AGTACGTGACGATCTGCACCAGCCCGGACCAGTACCCGGCGGTCATGGCG
GAGATGAAAGCGAACGTGAGCGAGAGTGGGGCGGGGCGGTGCGGGGCGAG
GAGAACAGCATCCCCCGCGCCGCCGCGTCGATAG
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