prot_H-canaliculatus_F_contig12670.2229.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12670.2229.1
Unique Nameprot_H-canaliculatus_F_contig12670.2229.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length79
Homology
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Match: A0A6H5K8F1_9PHAE (VDE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8F1_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 1.430e-51
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0
Query:    1 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIEAQAKSFNPKMMEGQWYI 79
            CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIE+Q KSFNPK+MEGQWYI
Sbjct:   81 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIESQVKSFNPKLMEGQWYI 159          
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Match: A0A7S2SKA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA3_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.070e-36
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 0
Query:    1 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIEAQAKSFNPKMMEGQWYI 79
            C AN+ C+QTCNGRPDE  CQIRCGD+FENE VG+FNACAVS+K CV QRQDDG++PVPP  A  +SFN K  EG+WYI
Sbjct:   58 CLANLACIQTCNGRPDESACQIRCGDIFENEVVGEFNACAVSQKRCVPQRQDDGTFPVPPESALVRSFNTKQFEGRWYI 136          
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Match: F0YAR5_AURAN (VDE domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAR5_AURAN)

HSP 1 Score: 126 bits (317), Expect = 1.710e-34
Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 0
Query:    1 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIEAQAKSFNPKMMEGQWYI 79
            C AN++C+ TC GR DE  CQIRCGDLFEN+ VG+FNACAVS+K CV QR DDG+WPVPP E+  K+FN ++ +G+WYI
Sbjct:   19 CAANLVCINTCTGRADESECQIRCGDLFENDVVGEFNACAVSQKKCVPQRGDDGAWPVPPQESYVKAFNTQVFDGRWYI 97          
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Match: A0A835ZCN5_9STRA (Violaxanthin de-epoxidase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN5_9STRA)

HSP 1 Score: 120 bits (302), Expect = 7.680e-31
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0
Query:    1 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIEAQAKSFNPKMMEGQWYI 79
            C AN+ C+QTC G+ DE  CQI+CGD FENE V KFNACAVS+K CV Q+QDD S+PVPP EA  KSF+  + +GQWYI
Sbjct:   73 CIANLACIQTCAGKADETACQIKCGDYFENETVAKFNACAVSRKRCVPQKQDDNSYPVPPQEALVKSFDTSIFQGQWYI 151          
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Match: A0A0M0JUT6_9EUKA (Violaxanthin de-epoxidase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUT6_9EUKA)

HSP 1 Score: 118 bits (295), Expect = 5.010e-30
Identity = 50/79 (63.29%), Postives = 57/79 (72.15%), Query Frame = 0
Query:    1 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIEAQAKSFNPKMMEGQWYI 79
            C AN++C+QTC GR DEG CQIRCGD F N+ VG F  CAV+ K CV QR DDGSWPVP  EA   SF+P M+ G WYI
Sbjct:   75 CAANLLCIQTCTGRADEGDCQIRCGDAFSNDVVGDFTKCAVTDKKCVPQRADDGSWPVPSKEALVASFSPDMLTGPWYI 153          
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Match: A0A8J2WYQ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYQ1_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.940e-29
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    1 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIEAQAKSFNPKMMEGQWYI 79
            C AN++C+ +C GR DE  CQIRCGDLFENE VG FNACAVS+K CV QRQDDG++P P  EA  K F+ ++  G+WYI
Sbjct:   84 CAANLVCINSCTGRKDESECQIRCGDLFENEVVGDFNACAVSQKKCVPQRQDDGAYPEPSPEAIVKKFDTRVFNGRWYI 162          
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Match: K8Z7V3_NANGC (Violaxanthin de-epoxidase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7V3_NANGC)

HSP 1 Score: 114 bits (286), Expect = 3.640e-28
Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    1 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIEAQAKSFNPKMMEGQWYI 79
            C AN+ICL TCN + DE  CQI CGDLFENE VG+FNACA+SKK CV +++DDG++PVPP  A   SF+    +G+WYI
Sbjct:  179 CLANVICLNTCNNKADEVGCQIGCGDLFENEVVGQFNACALSKKQCVPRKEDDGTYPVPPDSALVSSFDMNTFKGKWYI 257          
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Match: A0A1Z5JG75_FISSO (Violaxanthin de-epoxidase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JG75_FISSO)

HSP 1 Score: 112 bits (279), Expect = 2.210e-27
Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 0
Query:    1 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIEAQAKSFNPKMMEGQWYI 79
            C AN++C+ TCNG+ DE  CQI+CGD+FEN  VG+FN CAVS+ +CV Q+QD+G +P+PP E     FN K+  G+WYI
Sbjct:  127 CLANVVCINTCNGKDDEIGCQIKCGDIFENSVVGEFNNCAVSQMSCVPQKQDEGFYPIPPEENVVPKFNTKLFRGRWYI 205          
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Match: A0A7S2XNS0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS0_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.270e-27
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 0
Query:    1 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIEAQAKSFNPKMMEGQWYI 79
            C AN+IC+ TCNG+ DE  CQI+CGD+FEN+ VG+FN CAVS  +CV QRQDDGS+PVP        F+ K+  G+WYI
Sbjct:  145 CLANVICINTCNGKADEMGCQIKCGDIFENDVVGEFNKCAVSDMDCVPQRQDDGSYPVPAPSQLVSKFDTKIFNGRWYI 223          
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Match: A0A6A6M2U3_HEVBR (VDE domain-containing protein n=3 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6M2U3_HEVBR)

HSP 1 Score: 110 bits (276), Expect = 2.410e-27
Identity = 49/79 (62.03%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    1 CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQRQDDGSWPVPPIEAQAKSFNPKMMEGQWYI 79
            C ANI CLQTCN RPDE  CQI+CGDLFEN  V +FN CAVS+KNCV Q+ D G +PVP      KSFN     G+WYI
Sbjct:   62 CAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNGCAVSRKNCVPQKSDVGQFPVPDPAVLVKSFNMADFNGKWYI 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12670.2229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8F1_9PHAE1.430e-5196.20VDE domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2SKA3_9STRA3.070e-3670.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YAR5_AURAN1.710e-3464.56VDE domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A835ZCN5_9STRA7.680e-3164.56Violaxanthin de-epoxidase chloroplast n=1 Tax=Trib... [more]
A0A0M0JUT6_9EUKA5.010e-3063.29Violaxanthin de-epoxidase n=1 Tax=Chrysochromulina... [more]
A0A8J2WYQ1_9STRA1.940e-2962.03Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
K8Z7V3_NANGC3.640e-2860.76Violaxanthin de-epoxidase n=3 Tax=Monodopsidaceae ... [more]
A0A1Z5JG75_FISSO2.210e-2755.70Violaxanthin de-epoxidase n=2 Tax=Fistulifera sola... [more]
A0A7S2XNS0_9STRA2.270e-2758.23Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A6A6M2U3_HEVBR2.410e-2762.03VDE domain-containing protein n=3 Tax=Hevea brasil... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010788VDE lipocalin domainPFAMPF07137VDEcoord: 1..79
e-value: 1.5E-26
score: 93.4
NoneNo IPR availablePANTHERPTHR33970:SF1VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTICcoord: 1..79
NoneNo IPR availablePANTHERPTHR33970FAMILY NOT NAMEDcoord: 1..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12670contigH-canaliculatus_F_contig12670:1278..1995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12670.2229.1mRNA_H-canaliculatus_F_contig12670.2229.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12670 1278..1995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12670.2229.1 ID=prot_H-canaliculatus_F_contig12670.2229.1|Name=mRNA_H-canaliculatus_F_contig12670.2229.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=79bp
CFANIICLQTCNGRPDEGYCQIRCGDLFENEAVGKFNACAVSKKNCVKQR
QDDGSWPVPPIEAQAKSFNPKMMEGQWYI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010788VDE