prot_H-canaliculatus_F_contig12541.2144.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Match: D8LN22_ECTSI (PFfh, plastid Ffh subunit of the signal recognition particle n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN22_ECTSI) HSP 1 Score: 349 bits (895), Expect = 1.020e-115 Identity = 190/215 (88.37%), Postives = 199/215 (92.56%), Query Frame = 0
Query: 1 GVSPEQQFVKVMNDELVEIMGAEQAPLARRTDGKPTVVLLAGLQGTGKTTAAAKLAKYLKQEEEPKKVLLVAGDIYRPAAIDQLITLGKRIDVEVFSMGQGVDPVEITKAGIERAVEGGFDTVIVDTAGRQVV-------------ASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGVGEKV 202
GV+ +QQFV VMNDELVEIMGAEQAPLARRTDGKPTV+LLAGLQGTGKTTAAAKLAKYL+QEEEPKKVLLVAGD+YRPAAIDQLI+LGKRIDVEVFSMGQGVDPVEITKAG+ERAVEG FDTVIVDTAGRQVV ASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVG+GEK+
Sbjct: 161 GVTAKQQFVNVMNDELVEIMGAEQAPLARRTDGKPTVILLAGLQGTGKTTAAAKLAKYLQQEEEPKKVLLVAGDVYRPAAIDQLISLGKRIDVEVFSMGQGVDPVEITKAGLERAVEGEFDTVIVDTAGRQVVDDTLMTELKDIQVASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGIGEKM 375
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Match: A0A835YMH5_9STRA (SRP54-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH5_9STRA) HSP 1 Score: 257 bits (657), Expect = 9.790e-80 Identity = 145/242 (59.92%), Postives = 180/242 (74.38%), Query Frame = 0
Query: 1 GVSPEQQFVKVMNDELVEIMGAEQAPLARRT-DGKPTVVLLAGLQGTGKTTAAAKLAKYLKQE-------EEPK-------------------KVLLVAGDIYRPAAIDQLITLGKRIDVEVFSMGQGVDPVEITKAGIERAVEGGFDTVIVDTAGRQVV-------------ASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGVGEKV 202
GV+P+QQFVK+M DELV++MG++QAPLAR T +G+P V+LLAGLQG GKTTAAAKLAK+ ++ EEP+ KVLLVAGD+YRPAAI+QL LG+RI EVF+ G+ VDPV+I + G++ A +GGFD VIVDTAGRQV+ A E DEVLLVVDAMTGQEAATL + FNE++GITGA+LTK+DGD+RGG+ALSVQGVS +PIKFVGVGE++
Sbjct: 126 GVTPDQQFVKIMYDELVKVMGSQQAPLARSTKEGEPVVILLAGLQGAGKTTAAAKLAKFCQERGAGVAPAEEPQPEMKEGEVWTPPQREGPPGKVLLVAGDVYRPAAIEQLQRLGERIGAEVFAPGRDVDPVDIARGGVQYARDGGFDAVIVDTAGRQVIDEKLMDELVKVKGACEPDEVLLVVDAMTGQEAATLTAAFNERVGITGAILTKLDGDSRGGSALSVQGVSGRPIKFVGVGERI 367
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Match: A0A2V3IRY4_9FLOR (Signal recognition particle protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRY4_9FLOR) HSP 1 Score: 251 bits (642), Expect = 1.260e-78 Identity = 138/215 (64.19%), Postives = 166/215 (77.21%), Query Frame = 0
Query: 1 GVSPEQQFVKVMNDELVEIMGAEQAPLARRTDGKPTVVLLAGLQGTGKTTAAAKLAKYLKQEEEPKKVLLVAGDIYRPAAIDQLITLGKRIDVEVFSMGQGVDPVEITKAGIERAVEGGFDTVIVDTAGRQVV-------------ASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGVGEKV 202
GV P Q +K+M++EL EIMG +QAPLA+R+DG+PTVVLLAGLQG GKTTAAAKLA Y +++ + V+L+AGD+YRPAAIDQL TLG I+V+VFSMG DP +I + GIE+ E DT+IVDTAGRQV+ S+ DE LLVVDAMTGQEAATL FNE++GITGA+LTK+DGDTRGGAALSVQ VS PIKF+GVGEKV
Sbjct: 68 GVDPGQMLIKIMHEELTEIMGKDQAPLAKRSDGQPTVVLLAGLQGAGKTTAAAKLALYCLKDK--RSVMLIAGDVYRPAAIDQLKTLGDMINVDVFSMGTDADPRDIIRKGIEKGKENKIDTLIVDTAGRQVIDAKLMKELKDVKDISKPDETLLVVDAMTGQEAATLTRSFNEEVGITGAILTKLDGDTRGGAALSVQQVSGAPIKFIGVGEKV 280
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Match: R7QHF1_CHOCR (Signal recognition particle SRP54 homolog ffh n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHF1_CHOCR) HSP 1 Score: 248 bits (632), Expect = 2.750e-77 Identity = 136/215 (63.26%), Postives = 164/215 (76.28%), Query Frame = 0
Query: 1 GVSPEQQFVKVMNDELVEIMGAEQAPLARRTDGKPTVVLLAGLQGTGKTTAAAKLAKYLKQEEEPKKVLLVAGDIYRPAAIDQLITLGKRIDVEVFSMGQGVDPVEITKAGIERAVEGGFDTVIVDTAGRQVV-------------ASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGVGEKV 202
GV P Q VK+M++EL +IMG+ QAPLA RTDG+PTVVLLAGLQG GKTTAAAKLA Y +EE + V+++A D+YRPAAIDQL TLGK I+V+VF MG V+P EI + G++ +T+IVDTAGRQV+ S+ADE LLVVDAMTGQEAATL FN+++GITGA+LTK+DGDTRGGAALSVQ VS PIKF+GVGEKV
Sbjct: 52 GVEPGQMLVKIMHEELTKIMGSNQAPLANRTDGEPTVVLLAGLQGAGKTTAAAKLALYCLKEE--RSVMMIAADVYRPAAIDQLKTLGKSIEVDVFQMGTDVNPREIVRKGLQEGKTRKINTIIVDTAGRQVIDAKLMKELKDIKSVSKADETLLVVDAMTGQEAATLTRSFNDEVGITGAILTKLDGDTRGGAALSVQQVSGSPIKFIGVGEKV 264
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Match: A0A0G4GPH7_VITBC (SRP54 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GPH7_VITBC) HSP 1 Score: 246 bits (628), Expect = 3.650e-76 Identity = 141/234 (60.26%), Postives = 167/234 (71.37%), Query Frame = 0
Query: 2 VSPEQQFVKVMNDELVEIMGAEQAPLARRTDGKPTVVLLAGLQGTGKTTAAAKLAKYLKQEE----------------------EPKKVLLVAGDIYRPAAIDQLITLGKRIDVEVFSMGQGVDPVEITKAGIERAVEGGFDTVIVDTAGRQVV-------------ASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGVGE 200
V+P QQFVK++ DELV+IMG ++AP+A +PTV+LLAGLQG GKTTAAAKLA YL+ + +P+KVLLVA D+YRPAAIDQL LG+R+ EVF+MGQ VDPV+I K G+ A E G+DTVIVDTAGRQVV A DEVLLVVDAMTGQEAA L FNE+IGI+GA+LTK+DGDTRGG+ALSV+GVS KPIKFVGVGE
Sbjct: 69 VNPSQQFVKILYDELVDIMGGDEAPIATSATDQPTVLLLAGLQGAGKTTAAAKLALYLQTPQTRLDASGDAEGGEGEGGKGTMTKPRKVLLVAADVYRPAAIDQLQILGERVGCEVFTMGQDVDPVDIVKQGVAYAKEQGYDTVIVDTAGRQVVDDALMAELKRIKEAVPPDEVLLVVDAMTGQEAALLTQTFNEQIGISGAILTKLDGDTRGGSALSVRGVSGKPIKFVGVGE 302
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Match: UPI00034547B1 (signal recognition particle protein n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI00034547B1) HSP 1 Score: 242 bits (617), Expect = 1.030e-74 Identity = 137/216 (63.43%), Postives = 169/216 (78.24%), Query Frame = 0
Query: 1 GVSPEQQFVKVMNDELVEIMGAEQAPLARRTDGK-PTVVLLAGLQGTGKTTAAAKLAKYLKQEEEPKKVLLVAGDIYRPAAIDQLITLGKRIDVEVFSMGQGVDPVEITKAGIERAVEGGFDTVIVDTAGR----QVVASEAD---------EVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGVGEKV 202
GVSP+QQFVK++NDELV++MG APL + DG PT+VL+AGLQGTGKTTAAAKLA +L+++ KK LLVAGDIYRPAAIDQL TLG++ID+ VF +G+ DPVEI + G+ +A + GFDTVIVDTAGR Q + +E + E LLVVDAMTGQEAATL F+ +IG+TGA+LTK+DGDTRGGAALSV+ VS +PIKF+G GEKV
Sbjct: 67 GVSPDQQFVKIVNDELVKVMGEANAPLNQAADGTGPTIVLMAGLQGTGKTTAAAKLALFLRKQS--KKTLLVAGDIYRPAAIDQLKTLGEQIDIPVFDLGK-TDPVEIARQGVAKARDEGFDTVIVDTAGRLQIDQTMMAELEKIKTTINPHETLLVVDAMTGQEAATLTREFHNRIGVTGAILTKLDGDTRGGAALSVRQVSGQPIKFIGTGEKV 279
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Match: Q111T7_TRIEI (Signal recognition particle protein n=19 Tax=Oscillatoriales TaxID=1150 RepID=Q111T7_TRIEI) HSP 1 Score: 241 bits (615), Expect = 1.670e-74 Identity = 132/215 (61.40%), Postives = 164/215 (76.28%), Query Frame = 0
Query: 1 GVSPEQQFVKVMNDELVEIMGAEQAPLARRTDGKPTVVLLAGLQGTGKTTAAAKLAKYLKQEEEPKKVLLVAGDIYRPAAIDQLITLGKRIDVEVFSMGQGVDPVEITKAGIERAVEGGFDTVIVDTAGRQVV-------------ASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGVGEKV 202
GV P+QQF+K+++DEL +IMG APLA+ D PT+VL+AGLQGTGKTTA+AKLA +L++E + LLVA D+YRPAAIDQL+TLGK+IDV VF +G +DPVEI + G+E+A G D VI+DTAGR + A + E LLVVDAMTGQEAATL FN++IGITGA+LTKMDGDTRGGAALSV+ +S +PIKF+GVGEKV
Sbjct: 67 GVRPDQQFIKIVHDELAQIMGESNAPLAK-ADQPPTIVLMAGLQGTGKTTASAKLALHLRKEN--RSALLVATDVYRPAAIDQLVTLGKQIDVPVFELGTDIDPVEIAQKGLEKAKADGIDIVIIDTAGRLQIDQDMMAELARIKAAVKPQETLLVVDAMTGQEAATLTRTFNDQIGITGAILTKMDGDTRGGAALSVRRISGQPIKFIGVGEKV 278
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Match: A0A0G4FBS1_9ALVE (SRP54 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FBS1_9ALVE) HSP 1 Score: 244 bits (622), Expect = 2.040e-74 Identity = 131/217 (60.37%), Postives = 163/217 (75.12%), Query Frame = 0
Query: 1 GVSPEQQFVKVMNDELVEIMGAEQAPLARRTDGKPTVVLLAGLQGTGKTTAAAKLAKYLKQEEEP--KKVLLVAGDIYRPAAIDQLITLGKRIDVEVFSMGQGVDPVEITKAGIERAVEGGFDTVIVDTAGRQVVASEA-------------DEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGVGEKV 202
GV+ +QQF K++ DE+ E++G A LARR DG+PTV+LLAGLQGTGKTT A+KLA Y ++E+P KKVLLVA D+YRPAAIDQL+T+G + + V++ G +DPV I + +E+A GFDTV+VDTAGRQ + + DE LLVVDAMTGQEAA L F+E+IGITGAVLTK+DGDTRGGAALSV+GVS KPIKF GVGE+V
Sbjct: 135 GVTAQQQFFKLVKDEIQEVLGGSDASLARRVDGRPTVILLAGLQGTGKTTFASKLAYYCAKKEDPARKKVLLVAADVYRPAAIDQLVTMGGKTNTTVYAPGADIDPVRIAREAVEKAKNEGFDTVVVDTAGRQAIDEDLMDELARIKNTVKPDETLLVVDAMTGQEAAALTRQFDERIGITGAVLTKLDGDTRGGAALSVRGVSGKPIKFAGVGERV 351
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Match: K9EZ64_9CYAN (Signal recognition particle protein n=8 Tax=Cyanobacteria TaxID=1117 RepID=K9EZ64_9CYAN) HSP 1 Score: 241 bits (615), Expect = 2.150e-74 Identity = 134/215 (62.33%), Postives = 165/215 (76.74%), Query Frame = 0
Query: 1 GVSPEQQFVKVMNDELVEIMGAEQAPLARRTDGKPTVVLLAGLQGTGKTTAAAKLAKYLKQEEEPKKVLLVAGDIYRPAAIDQLITLGKRIDVEVFSMGQGVDPVEITKAGIERAVEGGFDTVIVDTAGRQVV-------------ASEADEVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGVGEKV 202
GV+P+QQF+K++ DELV +MG PLA + KPTVVL+AGLQGTGKTTA+AKLA +L+++E + +LVA D+YRPAA+DQLITLGK+I V VF MG +PV+I KAGI +A E G DTVIVDTAGR + A DEVLLVVDAMTGQEAATL F+E+IGITGA+LTKMDGD+RGGAALS++ +S KPIKF+G+GEKV
Sbjct: 67 GVAPDQQFIKIVYDELVALMGDANEPLAD-VESKPTVVLMAGLQGTGKTTASAKLALHLRKQE--RSAMLVATDVYRPAAVDQLITLGKQIKVPVFEMGTDANPVDIAKAGIAKAQEDGVDTVIVDTAGRLQIDQDMMAELEQIKTAISPDEVLLVVDAMTGQEAATLTQTFHEQIGITGAILTKMDGDSRGGAALSIRQISGKPIKFIGIGEKV 278
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Match: UPI0019F74F5C (Signal recognition particle protein n=1 Tax=Leptolyngbyaceae cyanobacterium T60_A2020_046 TaxID=2747813 RepID=UPI0019F74F5C) HSP 1 Score: 241 bits (615), Expect = 2.320e-74 Identity = 138/215 (64.19%), Postives = 167/215 (77.67%), Query Frame = 0
Query: 1 GVSPEQQFVKVMNDELVEIMGAEQAPLARRTDGKPTVVLLAGLQGTGKTTAAAKLAKYLKQEEEPKKVLLVAGDIYRPAAIDQLITLGKRIDVEVFSMGQGVDPVEITKAGIERAVEGGFDTVIVDTAGR-----QVVASEAD--------EVLLVVDAMTGQEAATLASVFNEKIGITGAVLTKMDGDTRGGAALSVQGVSQKPIKFVGVGEKV 202
GV+P QQF+K++NDELV++MG APLA D PTVVL+AGLQGTGKTTAAAKLA +L++E+ + LLVA D+YRPAA+DQLITLG++IDV VF MG +PVEI + GI +A E G DTVIVDTAGR ++A AD EVLLVVDAMTGQEAA L F+E+IGITGA+LTKMDGD+RGGAALSV+ +S +PIKF+GVGEKV
Sbjct: 67 GVNPGQQFIKIVNDELVKLMGDTNAPLAH-ADTAPTVVLMAGLQGTGKTTAAAKLALHLRKEK--RSTLLVATDVYRPAAVDQLITLGRQIDVPVFEMGTDANPVEIARLGIAKAKEDGIDTVIVDTAGRLQIDPAMMAELADIKTVIQPHEVLLVVDAMTGQEAANLTRTFHEQIGITGAILTKMDGDSRGGAALSVRQISGQPIKFIGVGEKV 278 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12541.2144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-canaliculatus_F_contig12541.2144.1 ID=prot_H-canaliculatus_F_contig12541.2144.1|Name=mRNA_H-canaliculatus_F_contig12541.2144.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=202bpback to top |