mRNA_H-canaliculatus_F_contig12534.2141.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Match: A0A6H5L5K3_9PHAE (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5K3_9PHAE) HSP 1 Score: 227 bits (579), Expect = 7.310e-73 Identity = 107/134 (79.85%), Postives = 115/134 (85.82%), Query Frame = 1
Query: 4 DPSRPPTAGCLQGHHVATLSVLVDPLLHQQHAFYTACALLVEFNTFLLILRRRVSWGNYLEVPFALSWVALRLVWYPFLGFYFAMCAFPEALTPVYPERLVAWRVAVEEERPVAMYLGSYLAWVGICVFQGWWS 405
+PS + + GHHVATLSVLVDPLL QHAFYTACALLVEFNTFLLILRRRVSWG LEVPFALSWVALRL+WYPFLGFYF MC FPE L +YPERLV WR AVEE+RPV M+LGSYLAWVGIC+FQGWWS
Sbjct: 116 NPSGVKSPRTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVQWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWS 249
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Match: A0A835Z8V7_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V7_9STRA) HSP 1 Score: 155 bits (392), Expect = 8.250e-44 Identity = 76/124 (61.29%), Postives = 89/124 (71.77%), Query Frame = 1
Query: 40 GHHVATLSVLVDPLLHQQHAFYTACALLVEFNTFLLILRRRVSWGN--YLEVPFALSWVALRLVWYPFLGFYFAMCAFPEALTPVYPERLVAWRVAVEEERPVAMYLGSYLAWVGICVFQGWWS 405
GHH ATL+VL+DP +H QHA YT ALLVE NTFLLI RRR WG +E PF SWVALRL+WYPFL F++ +CAFP L VYP +V WR+ +E + V +Y SY AWVGICVFQ WWS
Sbjct: 125 GHHAATLAVLIDPYMHPQHALYTCWALLVEANTFLLIARRRFRWGASALVEAPFVASWVALRLIWYPFLAFFWGLCAFP-GLADVYPAAIVRWRLRIEVDL-VRLYPASYAAWVGICVFQLWWS 246
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Match: A0A7S4PA72_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PA72_GUITH) HSP 1 Score: 127 bits (319), Expect = 1.700e-33 Identity = 64/138 (46.38%), Postives = 84/138 (60.87%), Query Frame = 1
Query: 1 SDPSRPPTAGCLQGHHVATLSVLVDPLLHQQHAFYTACALLVEFNTFLLILRRRVSWGNYLEVPFALSWVALRLVWYPFLGFYFAMCAFPEALTPVYPERL---VAWRVAVEEERPVAMYLGSYLAWVGICVFQGWWS 405
S P + G + HH+ATL VL+DPLL +H YT+ LLVE NT LL+LRRRVS+ +EVPF L+WV LR +WYP L FYF +C P P+ P L + R +E PV M S L+W +C+FQ +W+
Sbjct: 118 SQPKIVKSPGMVGSHHIATLLVLLDPLLQPKHRVYTSACLLVEINTLLLLLRRRVSYSAIVEVPFILTWVLLRNIWYPLLMFYFFLCFSPSTFIPLLPSSLSWVIEMRTKIELRNPVPMMGVSLLSWAMVCIFQFYWT 255
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Match: A0A7S0VYL2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VYL2_9CRYP) HSP 1 Score: 121 bits (304), Expect = 2.230e-31 Identity = 59/126 (46.83%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 28 GCLQGHHVATLSVLVDPLLHQQHAFYTACALLVEFNTFLLILRRRVSWGNYLEVPFALSWVALRLVWYPFLGFYFAMCAFPEALTPVYPERLVAWRVAVEEERPVAMYLGSYLAWVGICVFQGWWS 405
G + HH ATL VL+DPLL H+ YT+ LLVE NT LL+LRR++S+ +EVPF +SWV LR VWYP L F+F +C+ P L P++P +V R +E V M S ++W +CV Q W+
Sbjct: 110 GVVIAHHAATLLVLLDPLLSPSHSVYTSACLLVEINTLLLLLRRKMSYSVLVEVPFIISWVLLRNVWYPLLMFFFILCSAPGTLGPLFPRAMVEARRRIEGPEAVPMRFVSMVSWTAVCVLQLKWT 235
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Match: A0A7S2V1S4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S4_9STRA) HSP 1 Score: 112 bits (279), Expect = 8.860e-28 Identity = 57/136 (41.91%), Postives = 87/136 (63.97%), Query Frame = 1
Query: 13 RPPTAGCLQGHHVATLSVLVDPLLHQ-----QHAFYTACALLVEFNTFLLILRRRVSWGNYLEVPFALSWVALRLVWYPFLGFYFAMCAFPEALTPVYPERLVAWRVAVEEERPVAMYLGSYLAWVGICVFQGWWS 405
+ P CL HH++TL++L+ P+ + +YTA A++VE NT LL +RR+ +G ++E+PFALSWV +RLVWYP LGFYF +CAF + P+ ++ R +E P ++ S +A+V IC+FQ +WS
Sbjct: 102 KSPVTVCL--HHISTLAILLGPIFNAISGSGLQGYYTAAAIIVEANTVLLTMRRKFKFGLWVEIPFALSWVLIRLVWYPILGFYFMVCAFHSVRELLAPQFILHIRETIEGPEPEPLWKLSAMAFVLICMFQIFWS 235
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Match: A0A7S2B6S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6S7_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.090e-16 Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 43 HHVATLSVLVDPLLHQQHAFYTACALLVEFNTFLLILRRRVSWGNYLEVPFALSWVALRLVWYPFLGFYFAMCAFPE 273
HH+ TL+VL DP+ H Y +CALLVE NT L+ LRRR+ + EV F +W+ALRL+W+P L ++F +FPE
Sbjct: 75 HHLGTLAVLYDPITVLNHQKYASCALLVEVNTVLITLRRRLGRPMWCEVSFLATWLALRLIWFPCLSYWFLCSSFPE 151
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Match: A0A7S0E8D6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E8D6_9EUKA) HSP 1 Score: 64.3 bits (155), Expect = 9.470e-11 Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 1 SDPSRPPTAGCLQGHHVATLSVLVDPLLHQQHAFYTACALLVEFNTFLLILRRRVSWGNYLEVPFALSWVALRLVWYPFLGFYFAMCAFPE 273
+ PS L HH + + + ++H H Y A +VE NTF L+LRR + ++EV FALSWV +R+ W+P+L +F +C PE
Sbjct: 1 AQPSVVKAPAVLLWHHAVAIGLTLHTVVHPPHRRYVAWMSVVELNTFFLVLRRHLR-RRWVEVCFALSWVLIRVCWFPYLPLHF-LCFVPE 89
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Match: A0A7S0JGF7_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JGF7_9EUKA) HSP 1 Score: 65.5 bits (158), Expect = 1.880e-10 Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 43 HHVATLSVLVDPLLHQQHAFYTACALLVEFNTFLLILRRRVSWGNYLEVPFALSWVALRLVWYPFL 240
HH T +L+ P+LH +HA +TA LVE NT L+ +V G +L V F SWV LRLVWYP+L
Sbjct: 74 HHTLTALLLLHPILHAEHAHFTALGTLVELNT-LVHNANKVFGGGFLAVSFYASWVGLRLVWYPWL 138
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Match: A0A813G2R2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G2R2_POLGL) HSP 1 Score: 63.5 bits (153), Expect = 1.830e-9 Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 1
Query: 4 DPSRPPTAGCLQGHHVATLSVLVDPLLHQQHAFYTACALLVEFNTFLLILRRRVSWGNYLEVPFALSWVALRLVWYPFLG 243
+PS T + HH TL V++D + H + AL+VE NT LL LRR + + E+ F L+WV +RLVW+P LG
Sbjct: 87 NPSMVKTPKAILAHHAVTLIVIMDTIESASHRANASHALIVEINTVLLTLRRILGRPLWCEIGFYLTWVGIRLVWFPALG 166
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Match: A0A7S0ASE2_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ASE2_9DINO) HSP 1 Score: 62.0 bits (149), Expect = 9.230e-9 Identity = 46/132 (34.85%), Postives = 65/132 (49.24%), Query Frame = 1
Query: 22 TAGCLQGHHVATLSVLVDPLLHQQHAFYTACALLVEFNTFLLILRRRVSWGNYLEVPFALSWVALRLVWYPFLGFYFAMCA----FPEALTPVYPERLVAWRVAVEEERPVAMYLGSYLAWVGICVFQGWWS 405
T G + HHV TL V+ + + H + ALLVE NT LL LRRR+ + E F +W LRLVW+P L AM A F + L P L+ V V P+ Y + +++ + V Q +W+
Sbjct: 83 TPGSIVAHHVVTLVVIYGTVENVTHRVNASRALLVEINTVLLTLRRRLGRPVWCEAAFYATWGLLRLVWFPILSV--AMLASTFGFADQLRASMPACLL---VDVRSPPPIKAY--ASISFAAVVVLQYYWT 207 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12534.2141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12534.2141.1 >prot_H-canaliculatus_F_contig12534.2141.1 ID=prot_H-canaliculatus_F_contig12534.2141.1|Name=mRNA_H-canaliculatus_F_contig12534.2141.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=135bp SDPSRPPTAGCLQGHHVATLSVLVDPLLHQQHAFYTACALLVEFNTFLLIback to top mRNA from alignment at H-canaliculatus_F_contig12534:559..1693+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12534.2141.1 ID=mRNA_H-canaliculatus_F_contig12534.2141.1|Name=mRNA_H-canaliculatus_F_contig12534.2141.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1135bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12534:559..1693+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12534:559..1693+ >mRNA_H-canaliculatus_F_contig12534.2141.1 ID=mRNA_H-canaliculatus_F_contig12534.2141.1|Name=mRNA_H-canaliculatus_F_contig12534.2141.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=810bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12534:559..1693+ (Hapterophycus canaliculatus Oshoro5f female)back to top |