prot_H-canaliculatus_F_contig12530.2140.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12530.2140.1
Unique Nameprot_H-canaliculatus_F_contig12530.2140.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length224
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12530.2140.1 vs. uniprot
Match: D7FZF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF6_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 9.730e-60
Identity = 160/207 (77.29%), Postives = 169/207 (81.64%), Query Frame = 0 
Query:   18 DAGASASRREGKQIDLLLEVESLEPKQLMS-GGRAAPHKPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLDLLSQRSLEEELHMLLPVLLAHAPRIRMREVSAALLRTRFAPSLLHVSAMNDPLSLESIVLGVCDALTATPKGTATRTSHKVSQRAEELVMRLCGLGAIAAAEVRGVL 223
            DAG S SRR+GKQ+DLLLEVESLEPKQLMS GGR +P    S                 XXXXXXXXXXXX   XXXXXXXXX   XXXXXXXX SESLDLLSQRSLEEELHMLLPVLLAHAPR+RMRE SAALLRTRFAPSLLHVSAMNDPLSLESIVLGVCDA+ ATP  TATRTSH+VS+RAEELVMRLCGLGAIA+ +VR VL
Sbjct:  234 DAGGSVSRRDGKQMDLLLEVESLEPKQLMSSGGRQSP----SRGVVSRASSPAVGVGAAXXXXXXXXXXXXVEAXXXXXXXXXAVGXXXXXXXXSSESLDLLSQRSLEEELHMLLPVLLAHAPRVRMRESSAALLRTRFAPSLLHVSAMNDPLSLESIVLGVCDAVAATPGITATRTSHRVSRRAEELVMRLCGLGAIASVKVRQVL 436
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BLAST of mRNA_H-canaliculatus_F_contig12530.2140.1 vs. uniprot
Match: A0A6H5K9Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q4_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.090e-12
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:  172 ESIVLGVCDALTATPKGTATRTSHKVSQRAEELVMRLCGLGAIAAAEVRGVLV 224
            + IVLGVCDA+T TP  TAT TSH VS+RAEELVMRLCGLGA+A+ +VRGVLV
Sbjct:  105 QRIVLGVCDAVTVTPGITATLTSHNVSRRAEELVMRLCGLGAMASVKVRGVLV 157
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12530.2140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZF6_ECTSI9.730e-6077.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9Q4_9PHAE2.090e-1275.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12530contigH-canaliculatus_F_contig12530:796..3337 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12530.2140.1mRNA_H-canaliculatus_F_contig12530.2140.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12530 784..3337 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12530.2140.1 ID=prot_H-canaliculatus_F_contig12530.2140.1|Name=mRNA_H-canaliculatus_F_contig12530.2140.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=224bp
MDEEKADADSERGGGEGDAGASASRREGKQIDLLLEVESLEPKQLMSGGR
AAPHKPSSAGAAAGGGGGGAAAAAAAAASAAGVGGGAGGGRGGGGGGGSA
GERRDGGSGGSSESLDLLSQRSLEEELHMLLPVLLAHAPRIRMREVSAAL
LRTRFAPSLLHVSAMNDPLSLESIVLGVCDALTATPKGTATRTSHKVSQR
AEELVMRLCGLGAIAAAEVRGVLV
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