mRNA_H-canaliculatus_F_contig12523.2137.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A6H5K059_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K059_9PHAE) HSP 1 Score: 366 bits (939), Expect = 4.930e-119 Identity = 240/430 (55.81%), Postives = 262/430 (60.93%), Query Frame = 1
Query: 64 GKTAVYACGRTGTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQV------------------------ARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFMLRVVRSRRLNGAKGKKGSLARAGGEEAPRSASDAAAGRPRQQPRRSKAIESWL-----------RELEEGLGPGTDSHD--AALERQRQQRPQRYQYGSEDGPRLFDDGREEGEXXXXXXXXXXXXDREDDMEALLEAVERESGAEGKPAPEARRICCRYLLDAFRDGQFGRITLDGVPRVSRGGSRGQFYENSSSESXXXXXXXXAA------G*DRXXXXXXXXXXP---PGTPDNGDVADRLVRDWSSPDAWERADA 1215
GK AVYACGRTGTNVNKLL WARERGARRGEFSTTGA+AMVVGMPNVGKSSLINLLRGKAN E AKQV ARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRV S AGL LALTRAVPDSAVPPDVLVGFMLRVVRSRR +GA+ + + APR+ S AAA RP QP SKAI +WL + GP D +A+ + +QR +Y SE G DD +E+ +REDDMEALLEAVERESGAEGKPA EARRICCR+LLDAFRDGQFGRITLD VPR R N+++E A G DR P D+A+RLVRDWSS DAWE ADA
Sbjct: 145 GKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKAN----WSGSGGGDGEGAKQVCNRPALAAPFSPLRLCRAVPSREVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRSSGARDRSVTA-----PSAPRATSRAAARRPASQPSPSKAIAAWLLQPAGKAERTTTDANGATGPSISDDDETSAVGKHGKQRQADREYTSEPG----DDEKED----------RGDWEREDDMEALLEAVERESGAEGKPALEARRICCRFLLDAFRDGQFGRITLDSVPR------RRVLKTNTAAELASGPLPPGWAQLVARRGKDRGRAEAGRVVREGRRPSASQESDLAERLVRDWSSADAWEGADA 545
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A835Z590_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z590_9STRA) HSP 1 Score: 125 bits (314), Expect = 3.370e-28 Identity = 107/316 (33.86%), Postives = 148/316 (46.84%), Query Frame = 1
Query: 97 GTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQ-------------VSAFRIASNP-PLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFMLRVVRSRRLNGAKGKKGSLARAGGEEAPRSASDAAAGRPRQQPRRSKAIESWLRELEEGLGPGTDSHDAALER-QRQQRPQ---RYQYGSEDGPRLFDDGREEGEXXXXXXXXXXXXDREDDMEALLEAVERESGAEGKPAPEARRICCRYLLDAFRDGQFGRITLD 990
G + LL WARE+GA RG+F T GA+AMVVGMPNVGKS+LIN +R G + ++V RVGA PGV + +FR++ P PLY+VDTPGVMVP + S GL LALT AVPDS V +VLV ++ ++ +R GA ++ P + +++ E E L G +H + + + P+ R ++DG R R EALL A ER GA GK + R++ ++L FR G FGR++LD
Sbjct: 169 GKGIPGLLRWAREKGALRGQFVTLGAMAMVVGMPNVGKSTLINHMRRLCRGGGKG---------AGRKVVRVGATPGVXXXXXXXXXXXXXXXXIDSFRVSELPQPLYMVDTPGVMVPNIASPTVGLRLALTAAVPDSVVGEEVLVQYLCALLNAR---GAVASCAAVL--------------------DLPESTTLLDA---EASEKLHGGPKTHAVGMRGWSKCEAPRATVRNGVATKDGARRL------------ACRLRRCCCRA--CEALLAAAERRCGAAGKLEEQRRQMAASHVLALFRAGAFGRMSLD 435
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A482RDB0_9ARCH (G domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RDB0_9ARCH) HSP 1 Score: 112 bits (281), Expect = 7.050e-25 Identity = 57/134 (42.54%), Postives = 85/134 (63.43%), Query Frame = 1
Query: 103 NVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
+V ++L A + ++ F T GA +VVG+PNVGKSS+IN LR A+ + A+ GA PG+TR VSAF++ + PPLY+ D+PG+M+PR+ SV AG+ LA+T A+PD+ +P VL ++L
Sbjct: 27 HVAQILAMAAQLPSKAAAFRTAGATMVVVGVPNVGKSSIINALRASAH-------------TIQSKGAKTGASPGITRSVSAFKLNTKPPLYVFDSPGIMLPRIESVEAGMKLAVTNALPDTIIPKPVLAEYLL 147
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A1V9YN62_9STRA (Mitochondrial GTPase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN62_9STRA) HSP 1 Score: 110 bits (276), Expect = 5.280e-24 Identity = 63/169 (37.28%), Postives = 96/169 (56.80%), Query Frame = 1
Query: 1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEFS-TTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
+++DL+N ++ RV RF + G +++ G ++ K+L W G + +F T G V MVVG+PNVGKSSLIN R ++ K+ A VGA PGVT + F++ +P +Y++DTPGVM+P + S GL LALT A+ D V +++ +ML
Sbjct: 72 NKSDLANSNMKARVEARFEDAGMDSLFTSVAKGKHIQKILQWCTTHG--KSQFQQTAGTVVMVVGVPNVGKSSLINSFRSISSS---------LKLAKGKKKATVGATPGVTVRTDIFKVNESPAIYVMDTPGVMLPNIPSPDVGLKLALTGAIKDEVVGTELIADYML 229
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A7S1G8W2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G8W2_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.310e-23 Identity = 53/116 (45.69%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 157 FSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
+ G++ +V G+PNVGKSS+IN +R +AN R + A+ G PGVTR +SA +++S PP+YL+DTPG+M+PRV++ GL LALT A+P++ VP VLV F+L
Sbjct: 13 YKVAGSLMLVAGVPNVGKSSIINAVRQRANVRK-------------SKSAKTGGEPGVTRHISAIQVSSRPPVYLLDTPGIMLPRVDNPHVGLKLALTGALPENTVPTRVLVDFLL 115
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A418AEZ7_9STRA (CP-type G domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AEZ7_9STRA) HSP 1 Score: 108 bits (270), Expect = 2.310e-23 Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
+++DL+N +++RV RF EQ ++ G ++ +L W E G + + ST G V MVVG+PNVGKSS+IN R + K+ A VG PGVT + ++ P +Y++DTPGVM+P + S + GL LALT A+ D V +++ +ML
Sbjct: 95 NKSDLANSNMKERVEYRFDEQNMDCMFTSVIKGKHIRNILQWCTEHGKSQFQ-STAGTVVMVVGVPNVGKSSMINAFRSISTS---------LKLSKGKKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPSPSVGLKLALTGAIKDEIVGEELIADYML 252
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A024UI85_9STRA (Mitochondrial GTPase 1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UI85_9STRA) HSP 1 Score: 107 bits (268), Expect = 6.860e-23 Identity = 61/168 (36.31%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
+++DL+N +++RV RF EQ ++ G ++ +L W E G + + ST G V MVVG+PNVGKSS+IN R + K+ A VG PGVT + ++ P +Y++DTPGVM+P + S + GL LALT A+ D V +++ +ML
Sbjct: 72 NKSDLANSNMKERVEYRFDEQNMDCMFTSVIKGKHMRNILQWCTEHGKSQFQ-STAGTVVMVVGVPNVGKSSMINAFRSISTS---------LKLSKGKKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPSPSVGLKLALTGAIKDEIVGEELIADYML 229
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A6G0WZQ3_9STRA (Mitochondrial GTPase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZQ3_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.300e-22 Identity = 61/169 (36.09%), Postives = 92/169 (54.44%), Query Frame = 1
Query: 1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEF-STTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
++ DL+N +++RV RF EQ ++ G ++ +L W E G + +F ST G V MVVG+PNVGKSS+IN R + K+ A VG PGVT + ++ P +Y++DTPGVM+P + + GL LALT A+ D V +++ +ML
Sbjct: 72 NKTDLANSNMKERVAYRFHEQNMDCMFTSVIKGKHIRNILDWCTEHG--KSQFKSTAGTVVMVVGIPNVGKSSMINAFRSISTS---------LKLSKGKKKAVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPTPDVGLKLALTGAIKDDIVGVELIADYML 229
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: A0A1V9Y456_9STRA (Mitochondrial GTPase 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y456_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.720e-22 Identity = 60/171 (35.09%), Postives = 97/171 (56.73%), Query Frame = 1
Query: 1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFMLRVV 513
+++DL+N ++ RV RF + +++ G ++ K+L W G + + ST G V M+VG+PNVGKSS+IN R ++ K+ A VGA PGVT + F++ +P +Y++DTPGVM+P + + GL LALT A+ D V ++L +ML ++
Sbjct: 70 NKSDLANSNMKARVEARFDHENIDSMFTSVIKGKHIQKILQWCTAAGKSQFQ-STAGTVVMIVGIPNVGKSSMINAFRSLSSS---------LKVSKGKKKAVVGATPGVTVRTDMFKVNESPAIYVMDTPGVMLPNIPTPEVGLKLALTGAIKDDIVGVELLADYMLFIL 230
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Match: T0RG29_SAPDV (Mitochondrial GTPase 1 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RG29_SAPDV) HSP 1 Score: 105 bits (263), Expect = 3.330e-22 Identity = 60/168 (35.71%), Postives = 92/168 (54.76%), Query Frame = 1
Query: 1 SQADLSNQALEQRVLQRFREQGKTAVYACGRTGTNVNKLLTWARERGARRGEFSTTGAVAMVVGMPNVGKSSLINLLRGKANGRXXXXXXXXXXXESAKQVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVNSVAAGLCLALTRAVPDSAVPPDVLVGFML 504
+++DL+N ++ RV RF E ++ G ++ +L W G + + ST G V M+VG+PNVGKSS+IN R ++ K+ A VGA PGVT + F++ P +Y++DTPGVM+P + S GL LALT A+ D V +++ +ML
Sbjct: 71 NKSDLANSNMKARVEARFEEADMDCLFTSVIKGKHIQHILKWCNTHGKSQFQ-STAGTVVMIVGVPNVGKSSMINAFRSISSS---------LKLSKGKKKATVGATPGVTVRTDIFKVNEAPAIYVMDTPGVMLPNIPSPDVGLKLALTGAIKDDIVGAELIADYML 228 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12523.2137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12523.2137.1 >prot_H-canaliculatus_F_contig12523.2137.1 ID=prot_H-canaliculatus_F_contig12523.2137.1|Name=mRNA_H-canaliculatus_F_contig12523.2137.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=304bp MVVGMPNVGKSSLINLLRGKANGRGRGRGEGGGSGESAKQVARVGAMPGVback to top mRNA from alignment at H-canaliculatus_F_contig12523:471..3207- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12523.2137.1 ID=mRNA_H-canaliculatus_F_contig12523.2137.1|Name=mRNA_H-canaliculatus_F_contig12523.2137.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2737bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12523:471..3207- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12523:471..3207- >mRNA_H-canaliculatus_F_contig12523.2137.1 ID=mRNA_H-canaliculatus_F_contig12523.2137.1|Name=mRNA_H-canaliculatus_F_contig12523.2137.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1824bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12523:471..3207- (Hapterophycus canaliculatus Oshoro5f female)back to top |