prot_H-canaliculatus_F_contig1244.2072.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1244.2072.1
Unique Nameprot_H-canaliculatus_F_contig1244.2072.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length854
Homology
BLAST of mRNA_H-canaliculatus_F_contig1244.2072.1 vs. uniprot
Match: A0A6H5L8R5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8R5_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 7.290e-46
Identity = 265/837 (31.66%), Postives = 338/837 (40.38%), Query Frame = 0
Query:   17 GSEVKACCRLRP-RTTGAASQ----FVLVPSSSSLGSSTEGRGAGIAGEALFLRDGDNVVEIVEND--IVGVGLAKSE------GGVYGRQVLLRTMNSS-TMVMLKAYHDVRVRGR-QSSGSPSPR-KARASPARKTAPPLSPVGGKGARASQAKMLRXXXXXXXXXXXXXXXXXXXXXXXXX------VAGAQQFLLVGDTVDLGMSGP-KDSCCRFSYTLRLASD---ATARVIGAGTPGAAAPKEVKPK-TATPACVSSLAARPGGSSFGRGTNTKRRLDDVFNEGGVAREGENAGVRPGVS-----------------------------DRVCRSKRDDEVRVMPTPIEVYEVEDXXXXXXXXXXXXXXXX-------------DEGSRAK-----PIGVMNPCGSDDWPVDAVNSKDQPLDLCDSDREDDADEPRGSGAQAA---------------------AAAKPIGSSGDXXXXXXXXXSPFSLGGRGMETSSGKSPPKPMKAVETLTKTHVKPSVSSSPGRPIALALVKADVSWKSATPSTATEKFLTQVEKPRLSSPSSPSSSGTAGTDAAALVPRKPPWVRRGTTSLTASXXXXXXXXXXXHSGQSGDKPSPPPCFHTRGEVESPHVDALRPTR--------------DAKPPHAGVVR-------GYTAAGLPTVAAGMRKWGHRPPTTTRTLARMDGLLHSAIRCAIKDCPETSVAVVEEVLARGMAPDGSLCATVVSSLLESRCSVRNECLRRQLHAMLRVDPKSWTPPG-DTAPAWLDDLTAVITGREGARRNKHHGRPPSNAVLTAHTAVLEVVVGYV 736
            GS  +  CR+R  R   AA++     VL P  S+      GR A +  E L +  GD+VVE  +    +VGVGL  S+      G  Y +QVLL+T ++    V+LKA  DVR+  R QS  SPSPR KAR          LSP G K A A++A    XXXXXXX     XXX                 AGAQQ+LLVGDTVDLG++G  K   C +SYTLRLAS     T     +GTP   A +E KP  T  P+          G+  G G  TKRRL+D F +   A  G     RP V                                       + V+V+P+ +    + D                             DE  R       P GV++ C  DD PVDA  S + P+DLCD    DD D     G                         A A+PI  SG               G RG   S G +     KA  T            S G P       +    K+  P+         VE             G++GT      P KPP+  R TT+                + ++  +      F ++  +      +LR T               + +P  A  V        G TAA     AA         PT  R L RMD  +   +   +K  PET+VAVV+E LA G AP  SLC T+VSSLLESRC VR+ECLR QL AML VDP  W+PP  D AP WL++L  +I     A   +    PPS+ VL AH  VLE+VV Y+
Sbjct:    3 GSASEGTCRVRRVRAARAAAEGQPALVLEPCPSA------GRAASMTTETLPVPHGDSVVETTQPSAGVVGVGLDGSQDSTSQGGSSYEKQVLLQTTSTPRNAVLLKAIRDVRIFDRRQSPSSPSPRRKAR----------LSPSGKKSAAAARAXXXXXXXXXXXPAVKAXXXAREMIRNGGGGGATRLTAGAQQYLLVGDTVDLGVAGAGKGFRCEYSYTLRLASSRSSVTTTPPRSGTPATGA-RESKPSATREPS---------SGAGGGGGCGTKRRLEDFFGDSTGAAVG--TAARPSVPVGSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCEGVQVVPSDMFAIAIPDDDDDIRDENAAVTTAVAPTATPSNPGRGGDERRRTGSTPFVPFGVVDLCDLDDQPVDAGKSVELPIDLCD----DDNDXXXXXGVATXXXXXXXXXXXXXXXXXXXXXXARARPIAPSG---------------GLRGRSDSGGLA-----KASPTXXXXXXXXXXXWSSGSPNRRKSPLSPKQTKAPLPANTDPLAGVVVE-------------GSSGT------PSKPPFSHRATTAEADISSGRGSTGKNPSAAEAAVEKENSDLFLSQEPLSRRRAASLRTTASRHTSEGKDEEASLEKRPSDASSVHEDTRVDDGCTAAA----AAASPPAEQSNPTEARALTRMDDHVRLTLNTFVKCAPETTVAVVKEFLALGTAPPSSLCGTIVSSLLESRCRVRSECLRMQLRAMLDVDPNVWSPPDEDDAPGWLENLMGIILTDPPAAAKRRD--PPSDQVLGAHAIVLELVVEYL 762          
BLAST of mRNA_H-canaliculatus_F_contig1244.2072.1 vs. uniprot
Match: D8LSY6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSY6_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 3.280e-43
Identity = 237/790 (30.00%), Postives = 307/790 (38.86%), Query Frame = 0
Query:   17 GSEVKACCRLR-----PRTTGAASQFVLVPSSSSLGSSTEGRGAGIAGEALFLRDGDNVVEIVEND--IVGVGLAKSE------GGVYGRQVLLRTMNSS-TMVMLKAYHDVRVRGR-QSSGSPSPRKARASPARKTAPPLSPVGGKGARASQA-------KMLRXXXXXXXXXXXXXXXXXXXXXXXXXVAGAQQFLLVGDTVDLGMSGP-KDSCCRFSYTLRLASDATARVIGAGTPGAAAPKEVKPKTATPACVSSLAARPGGSSFGRGTNTKRRLDDVFNEGGVAREGENAGVRPGVSDRVCRSKRDDEVRVMPTPIEVYEVEDXXXXXXXXXXXXXXXXDEGSRAKPIGVMNPCGSDDWPVDAVNSKDQPLDLCDSDREDDADEPRGS-------------------------GAQAAAAAKPIGSSGDXXXXXXXXXSPFSLGGRGMETSSG--KSPPKPM------KAVETLTKTHVKPSVSSSPGRPIALALVKADVSWKSATPS--------TATEKFLTQVEKPRLSSPS-----SPSSSGTAGTDAAALVPRKPPWVRRGTTSLTASXXXXXXXXXXXHSGQSGDKPSPPPCFHTRGEVESPHVDALRPTRDAKPPHAGVVRGYTAAGLPTVAAGMRKWGHRPPTTTRTLARMDGLLHSAIRCAIKDCPETSVAVVEEVLARGMAPDGSLCATVVSSLLESRCSVRNECLRRQLHAMLRVDPKSWTPPG-DTAPAWLDDLTAVITGREGARRNKHHGRPPSNAVLTAHTAVLEVVVGYV 736
            GS  +  CR+R     P       +FVL P  S+      GR A +  E L +  GD+VVE       +V VGL  S+      GG Y +QVLL+T ++    V+LKA  DVR+ GR QS  SPSP     SP RK   P SP G K A A+         K +                           A AQ++LLVGDTVDLG++G  +   C +SYTLRLAS                       TATP            S+ GRG + +RR                 G  P V                                                  P GV++ C  DD PVDA  S + P+DLCD D +D+ ++   +                          A   A A+PI  SG               G RG   S G  K+ P P       +    L+ T  K  + +S   P A   V   V   S TPS        T  E     +   R S+PS      P+ +G   + A A   ++   +      L+             H+  +G K    P    + +V S H D              V  G  AA          +  H  PT  R L RMD      +   +K  PET+VA+V+E LA G AP  SLC T+VSSLLESRC +R+ECLR QL AML VDP  W+PP  D AP WL++L  VI     A   +    PPS+ VL AH  VLE+VV Y+
Sbjct:    3 GSASEGMCRVRRVRAAPAAAEGRPEFVLEPCPSA------GRAASMTTETLPVPHGDSVVETTPPSAGVVSVGLDGSQDSTSQGGGSYEKQVLLQTTSTPRNAVLLKAIRDVRIFGRRQSPSSPSP-----SPRRKDFRP-SPAGKKSAAAAARASXXXXXKRVASPAAKAAAAAREMIRNGGGGGATRVTAEAQKYLLVGDTVDLGVAGAGRGFRCEYSYTLRLASSXXXXXXXXXXXXXXXXXXXXXPTATP------------SNPGRGEDKRRRT----------------GSMPFV--------------------------------------------------PFGVVDLCDLDDQPVDAGTSVELPIDLCDDDSDDEGEKGVATPXXXXXXXXXXXXXXXXXXXXXXXXXASCEARARPIAPSG---------------GLRGRSDSGGLAKASPTPWNIGFPNRRKSPLSPTQTKTPLPASTDPPAAAGAV---VEGSSGTPSKPPFSRRATTAEA---DISSGRGSTPSPLIETDPAEAGKNPSAAEAAAEKENSDLFLSQEPLSRRRAASPRTPASRHTPAAG-KDEGAPLQKRQSDVSSVHEDMR------------VDDGCKAAXXXXXXXPPAE--HSNPTEARVLTRMDDHFRLTLNTFVKYAPETTVAIVKEFLALGTAPPSSLCGTIVSSLLESRCRIRSECLRLQLRAMLDVDPNVWSPPDKDDAPGWLENLMGVILTDPPAVAKRRD--PPSDQVLGAHAIVLELVVDYL 664          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1244.2072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8R5_9PHAE7.290e-4631.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSY6_ECTSI3.280e-4330.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1244contigH-canaliculatus_F_contig1244:10932..14438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1244.2072.1mRNA_H-canaliculatus_F_contig1244.2072.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1244 9198..14531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1244.2072.1 ID=prot_H-canaliculatus_F_contig1244.2072.1|Name=mRNA_H-canaliculatus_F_contig1244.2072.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=854bp
MVSTKQKDKDVRAATDGSEVKACCRLRPRTTGAASQFVLVPSSSSLGSST
EGRGAGIAGEALFLRDGDNVVEIVENDIVGVGLAKSEGGVYGRQVLLRTM
NSSTMVMLKAYHDVRVRGRQSSGSPSPRKARASPARKTAPPLSPVGGKGA
RASQAKMLRVSPAKMLRASPARARRGMSGGATRIVAGAQQFLLVGDTVDL
GMSGPKDSCCRFSYTLRLASDATARVIGAGTPGAAAPKEVKPKTATPACV
SSLAARPGGSSFGRGTNTKRRLDDVFNEGGVAREGENAGVRPGVSDRVCR
SKRDDEVRVMPTPIEVYEVEDDDDDNRAATAAKRRRRDEGSRAKPIGVMN
PCGSDDWPVDAVNSKDQPLDLCDSDREDDADEPRGSGAQAAAAAKPIGSS
GDHSSSSSSSSSPFSLGGRGMETSSGKSPPKPMKAVETLTKTHVKPSVSS
SPGRPIALALVKADVSWKSATPSTATEKFLTQVEKPRLSSPSSPSSSGTA
GTDAAALVPRKPPWVRRGTTSLTASKEEEEEQQQQQHSGQSGDKPSPPPC
FHTRGEVESPHVDALRPTRDAKPPHAGVVRGYTAAGLPTVAAGMRKWGHR
PPTTTRTLARMDGLLHSAIRCAIKDCPETSVAVVEEVLARGMAPDGSLCA
TVVSSLLESRCSVRNECLRRQLHAMLRVDPKSWTPPGDTAPAWLDDLTAV
ITGREGARRNKHHGRPPSNAVLTAHTAVLEVVVGYVEAGRTSSHAAAAAA
AAAAAAAATTRLRVYLGLGTDARRRRRQGSCNFSSVQGRRGGGLWSPRNG
RGRVTRSRPAPLGRSEPGARAGRCAGARARHRTATAAGDDGGERAPPWFG
RVS*
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