prot_H-canaliculatus_F_contig12421.2057.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig12421.2057.1
Unique Name	prot_H-canaliculatus_F_contig12421.2057.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	206

Homology

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BLAST of mRNA_H-canaliculatus_F_contig12421.2057.1 vs. uniprot
Match: A0A6H5K768_9PHAE (FPL domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K768_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.110e-37
Identity = 133/213 (62.44%), Postives = 140/213 (65.73%), Query Frame = 0

Query:    1 MFWKSVPGVPWAGPSPRGSNGVGVGGNKARGANAR-------RRQLAPEPYSLGHLRVLFQRLIDAQEGRVEGETTVVETLRAISEVVVYGENQDAKLAARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADSTLPQEEVRRLTPSSRAEMDAGGVFGEGGRG--KGGAGSKGRVGXXXXXDLAPPPVLKGLTVTDVRREDAFFELF 204
            MFW+SVP VPWAGPSPRGSN                      R+Q APEPYSLGHLRVLFQRLIDAQEG+VEGETTVVETLRAISEVVVYGENQDAKL+ARAA    XXXXXXXXXXXXXXXXXXXXXXXXXXXX                +         V G G R   KG  GS G          +PPPVL+GLT TDVRREDAFFELF
Sbjct:   52 MFWRSVPSVPWAGPSPRGSNXXXXXXXXXXXXXXXXXXXXXXRKQQAPEPYSLGHLRVLFQRLIDAQEGKVEGETTVVETLRAISEVVVYGENQDAKLSARAAAKAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAA---------VEGSGTRPPPKGAEGSPGEF----TPGNSPPPVLEGLT-TDVRREDAFFELF 250

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BLAST of mRNA_H-canaliculatus_F_contig12421.2057.1 vs. uniprot
Match: D7FXA6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA6_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 2.900e-35
Identity = 66/84 (78.57%), Postives = 70/84 (83.33%), Query Frame = 0

Query:    1 MFWKSVPGVPWAGPSPRGSNG------VGVGGNKARGANARRRQLAPEPYSLGHLRVLFQRLIDAQEGRVEGETTVVETLRAIS 78
            MFW+SVP VPWAGPSPRGSN       VG GG  A+G NA+R+Q APEPYSLGHLRVLFQRLIDAQEGRVEGETTVVETLRA S
Sbjct:    1 MFWRSVPSVPWAGPSPRGSNNGAGGGAVGAGGRHAKGGNAQRKQQAPEPYSLGHLRVLFQRLIDAQEGRVEGETTVVETLRAAS 84

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig12421.2057.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig12421.2057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K768_9PHAE	1.110e-37	62.44	FPL domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7FXA6_ECTSI	2.900e-35	78.57	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig12421	contig	H-canaliculatus_F_contig12421:68..2808 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig12421.2057.1	mRNA_H-canaliculatus_F_contig12421.2057.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig12421 68..2808 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig12421.2057.1 ID=prot_H-canaliculatus_F_contig12421.2057.1|Name=mRNA_H-canaliculatus_F_contig12421.2057.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=206bp
MFWKSVPGVPWAGPSPRGSNGVGVGGNKARGANARRRQLAPEPYSLGHLR
VLFQRLIDAQEGRVEGETTVVETLRAISEVVVYGENQDAKLAARAAAKAQ
EEQEHEQEEAAAAAAAAAAAAAAAAAAAVADSTLPQEEVRRLTPSSRAEM
DAGGVFGEGGRGKGGAGSKGRVGGGGGGDLAPPPVLKGLTVTDVRREDAF
FELFW*