mRNA_H-canaliculatus_F_contig12404.2042.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig12404.2042.1
Unique NamemRNA_H-canaliculatus_F_contig12404.2042.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Match: D7G4A7_ECTSI (Apyrase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4A7_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 7.210e-84
Identity = 122/145 (84.14%), Postives = 140/145 (96.55%), Query Frame = 1 
Query:    1 LLAVDDRTGIVFEIVEDEPGERHMAPRYILPEGDGLVDKGMKLEWATEKDGSLVVGSFGKEFTNDEGQIVNTNNNWIISIDPNGVISREDWTQEYDKLREAVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDEKVG 435
            LL VDDRTGIVFEI+E++ GERHMAPRYILPEGDG +DKGMKLEWATEKDGSLVVGSFGKE+T+++G+IVNTNNNWII+IDP+GVISR+DWT++Y+ LR+ VGATFPGYMIHESAAWSDALNKWVFLPRRISSEKY+DVRDEK+G
Sbjct:  153 LLTVDDRTGIVFEILEEQ-GERHMAPRYILPEGDGNLDKGMKLEWATEKDGSLVVGSFGKEYTDNDGRIVNTNNNWIITIDPHGVISRQDWTKQYNTLRDKVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYDDVRDEKMG 296
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BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Match: A0A835Z277_9STRA (Apyrase family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z277_9STRA)

HSP 1 Score: 199 bits (505), Expect = 5.780e-60
Identity = 86/145 (59.31%), Postives = 110/145 (75.86%), Query Frame = 1 
Query:    1 LLAVDDRTGIVFEIVEDEPGERHMAPRYILPEGDGLVDKGMKLEWATEKDGSLVVGSFGKEFTNDEGQIVNTNNNWIISIDPNGVISREDWTQEYDKLREAVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDEKVG 435
            L   DDRTGIVFE++++  G+ H+AP+++L EGDG VDKGMK+EWAT KDG LV GSFGKE+TN  G +++TNNNW++ +D  G   R DWTQ Y  +REA G TFPGYMIHE+  W+ AL +WVFLPRRIS + Y+D  DE+ G
Sbjct:  151 LYTFDDRTGIVFEVIKESSGDYHVAPKHVLGEGDGSVDKGMKIEWATVKDGELVCGSFGKEYTNAAGAVISTNNNWVVLVDAEGRQRRYDWTQHYQTMREATGTTFPGYMIHEAGNWAPALRRWVFLPRRISPDPYDDAEDERKG 295
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BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Match: A0A6U5LCD9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5LCD9_9STRA)

HSP 1 Score: 184 bits (468), Expect = 3.990e-55
Identity = 82/146 (56.16%), Postives = 111/146 (76.03%), Query Frame = 1 
Query:    1 LLAVDDRTGIVFEIVEDEPGERHMA-PRYILPEGDGLVDKGMKLEWATEKDGSLVVGSFGKEFTNDEGQIVNTNNNWIISIDPNGVISREDWTQEYDKLREAVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDEKVG 435
            LL+ DDRTG ++E++ +E G++ +  PR ++ EGDG  DKGMK EWAT KDG+L VGS GKEFTN +G I N NNNW+  ++P+G + R+DWT++Y+ +R A+GA  PGY+IHE+  WS  + KWVFLPRR+SSE YNDV DE+ G
Sbjct:   64 LLSFDDRTGSIYELISNEDGKKTIVVPRLVVTEGDGDTDKGMKFEWATVKDGNLFVGSLGKEFTNLDGSIANLNNNWVAVVNPHGEVFRKDWTEKYNAVRSALGAERPGYLIHEAIEWSRHMRKWVFLPRRVSSEAYNDVSDERKG 209
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BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Match: UPI000711D1E8 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711D1E8)

HSP 1 Score: 177 bits (450), Expect = 4.870e-52
Identity = 83/145 (57.24%), Postives = 101/145 (69.66%), Query Frame = 1 
Query:    1 LLAVDDRTGIVFEIVEDEPGERHMAPRYILPEGDGLVDKGMKLEWATEKDGSLVVGSFGKEFTNDEGQIVNTNNNWIISIDPNGVISREDWTQEYDKLREAVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDEKVG 435
            L   DDRTG+ FEIV      +   PRYI+ EGDG  DKG K EWAT KDG + VGSFGKE+TN +G I NTNN WI  ID NGV++ EDWT +++KLREAVG  +PGYMIHE+  WS    +WV LPRR+S E Y++  DE+ G
Sbjct:  128 LFTFDDRTGLAFEIVG-----KKAIPRYIMMEGDGNTDKGQKTEWATVKDGKMYVGSFGKEYTNPDGSIKNTNNMWISIIDRNGVVTHEDWTDQFNKLREAVGCPYPGYMIHEAITWSPVRRQWVILPRRVSKEAYDENEDERRG 267
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BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Match: A0A196SJW8_BLAHN (Soluble calcium-activated nucleotidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SJW8_BLAHN)

HSP 1 Score: 176 bits (445), Expect = 5.640e-51
Identity = 80/151 (52.98%), Postives = 109/151 (72.19%), Query Frame = 1 
Query:    1 LLAVDDRTGIVFEIVEDEPGERHMAPRYILPEGDGLVDKGMKLEWATEKDGSLVVGSFGKEFTNDEGQIVNTNNNWIISIDPNGVISREDWTQEYDKLREAVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDEKVGESAARL 453
            L + DDRTGIV+E+V+         PR+IL EG+G  +KG K EWAT KDG ++VGSFGKE+TN +G I NTNN W+ +ID NG +   DWT+ Y++LR+AVG ++PGYMIHE+ AWS  + KWV LPRR+S++ Y++V DE+ G +   L
Sbjct:  156 LYSFDDRTGIVYEMVKGNKA----IPRFILMEGNGDTEKGQKSEWATVKDGKMIVGSFGKEYTNPDGSIRNTNNMWVSTIDSNGHVEHVDWTENYNRLRKAVGCSYPGYMIHEAIAWSQHMKKWVVLPRRVSNQPYDEVEDERRGSNLVLL 302
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BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Match: A0A7S2UTY5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTY5_9STRA)

HSP 1 Score: 171 bits (434), Expect = 4.400e-50
Identity = 80/148 (54.05%), Postives = 106/148 (71.62%), Query Frame = 1 
Query:   13 DDRTGIVFEIVEDEPGERHMA-PRYILPEGDGLVDKGMKLEWATEKDGSLVVGSFGKEFTNDEGQIVNTNNNWIISIDPNGVISREDWTQEYDKLREAVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDEKVGESAARL 453
            DDRTGI+FE VED  G   MA PR I+ EGDG  DKGMK+EWAT KDG + +GS GKE+T  +G + NTNN W++++D +GV++  D+  +Y KLR   GA +PGY+IHE+ AWS+AL +WV LPRR+S E Y++  DEK G +   L
Sbjct:   88 DDRTGIIFE-VEDAAGASPMAVPRNIVMEGDGNTDKGMKIEWATVKDGLMYLGSMGKEYTRPDGSVANTNNLWVVTVDRDGVVTHHDYKDQYAKLRSVAGAGWPGYLIHEAIAWSEALRRWVILPRRVSEEAYDEELDEKKGSNMVML 234
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BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Match: A0A0G4HCH4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HCH4_9ALVE)

HSP 1 Score: 172 bits (437), Expect = 1.060e-49
Identity = 83/150 (55.33%), Postives = 108/150 (72.00%), Query Frame = 1 
Query:    1 LLAVDDRTGIVFEIVEDEPGERHMAPRYILPEGDGLVDKGMKLEWATEKDGSLVVGSFGKEFTNDEGQIVNTNNN-WIISIDPNGVISREDWTQEYDKLREAVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDEKVGESAA 447
            LL+ DDRTGIV+E +        +APR+IL EGDG  +KGMK+EW TEKDG L VGSFGKEFT+  G++V + NN W+  I P+G   R +WT+EYD +RE +G  +PGY+IHE+  WS+AL KWV LPRR+S EKY++  DEK G + A
Sbjct:  156 LLSGDDRTGIVYEHLPTGV----VAPRFILAEGDGNTNKGMKIEWMTEKDGDLYVGSFGKEFTDATGEVVQSRNNMWVTVISPDGATKRVNWTREYDVMRETLGTPWPGYLIHEAVHWSEALRKWVILPRRVSKEKYDEDADEKRGSNKA 301
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BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Match: A0A0G4EIJ4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EIJ4_VITBC)

HSP 1 Score: 174 bits (440), Expect = 1.140e-49
Identity = 76/142 (53.52%), Postives = 106/142 (74.65%), Query Frame = 1 
Query:    1 LLAVDDRTGIVFEIVEDEPGERHMAPRYILPEGDGLVDKGMKLEWATEKDGSLVVGSFGKEFTNDEGQIVNTNNNWIISIDPNGVISREDWTQEYDKLREAVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDE 426
            L   DDRTGIV+E+   + G+  + PR+I+ EG G  +KGMK+EWAT+KDG+L +GSFGKE+TN +G+IVN NN W++++  NG + R +W   YD +R A+GA +PGY IHE+ AWSD + KWV LPRR+SS+ Y+D +DE
Sbjct:  212 LYTFDDRTGIVYELDTKKEGKASVYPRHIVTEGAGDTNKGMKIEWATQKDGNLWIGSFGKEYTNAKGEIVNENNMWVVALGANGKMQRFNWKPAYDAVRRALGAPYPGYCIHEAVAWSDDMQKWVLLPRRVSSDPYDDEQDE 353
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BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Match: A0A196S3X9_BLAHN (CANT1 soluble calcium-activated nucleotidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S3X9_BLAHN)

HSP 1 Score: 171 bits (434), Expect = 1.580e-49
Identity = 82/151 (54.30%), Postives = 102/151 (67.55%), Query Frame = 1 
Query:    1 LLAVDDRTGIVFEIVEDEPGERHMAPRYILPEGDGLVDKGMKLEWATEKDGSLVVGSFGKEFTNDEGQIVNTNNNWIISIDPNGVISREDWTQEYDKLREAVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDEKVGESAARL 453
            L A DDRTG+VFEI   +       PR+IL EGDG  DKG K EWAT KDG + VGSFGKE+TN +G I NTNN W+  ID  G +S EDWT  ++K+REA G  +PGYMIHE+ +WS A  +WV LPRR+S E Y++  DE+ G +   L
Sbjct:  140 LYAFDDRTGMVFEIRGSKA-----IPRHILMEGDGNTDKGQKTEWATVKDGKMYVGSFGKEYTNPDGSIKNTNNMWVSIIDKYGAVSHEDWTARFNKVREAAGCPYPGYMIHEAISWSPARRQWVILPRRVSQEPYDENEDERRGSNTVLL 285
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BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Match: A0A196S865_BLAHN (Soluble calcium-activated nucleotidase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S865_BLAHN)

HSP 1 Score: 172 bits (435), Expect = 2.460e-49
Identity = 82/151 (54.30%), Postives = 102/151 (67.55%), Query Frame = 1 
Query:    1 LLAVDDRTGIVFEIVEDEPGERHMAPRYILPEGDGLVDKGMKLEWATEKDGSLVVGSFGKEFTNDEGQIVNTNNNWIISIDPNGVISREDWTQEYDKLREAVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDEKVGESAARL 453
            L A DDRTG+VFEI   +       PR+IL EGDG  DKG K EWAT KDG + VGSFGKE+TN +G I NTNN W+  ID  G +S EDWT  ++K+REA G  +PGYMIHE+ +WS A  +WV LPRR+S E Y++  DE+ G +   L
Sbjct:  174 LYAFDDRTGLVFEIRGSKA-----IPRHILMEGDGNTDKGQKTEWATVKDGKMYVGSFGKEYTNPDGSIKNTNNMWVSIIDKYGAVSHEDWTARFNKVREAAGCPYPGYMIHEAISWSPARRQWVILPRRVSQEPYDENEDERRGSNTVLL 319
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12404.2042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4A7_ECTSI7.210e-8484.14Apyrase family protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835Z277_9STRA5.780e-6059.31Apyrase family protein n=1 Tax=Tribonema minus Tax... [more]
A0A6U5LCD9_9STRA3.990e-5556.16Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
UPI000711D1E84.870e-5257.24hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
A0A196SJW8_BLAHN5.640e-5152.98Soluble calcium-activated nucleotidase n=1 Tax=Bla... [more]
A0A7S2UTY5_9STRA4.400e-5054.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4HCH4_9ALVE1.060e-4955.33Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A0G4EIJ4_VITBC1.140e-4953.52Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A196S3X9_BLAHN1.580e-4954.30CANT1 soluble calcium-activated nucleotidase n=1 T... [more]
A0A196S865_BLAHN2.460e-4954.30Soluble calcium-activated nucleotidase n=1 Tax=Bla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12404contigH-canaliculatus_F_contig12404:456..2159 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score260.4
Seed ortholog evalue5.3e-67
Seed eggNOG ortholog2880.D7G4A7
Preferred nameCANT1
KEGG rclassRC00002
KEGG koko:K12304,ko:K17300
KEGG ReactionR00155,R00328,R00961
KEGG Pathwayko00230,ko00240,map00230,map00240
GOsGO:0000003,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004382,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006029,GO:0006139,GO:0006152,GO:0006163,GO:0006195,GO:0006213,GO:0006220,GO:0006244,GO:0006256,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006986,GO:0007154,GO:0007165,GO:0007275,GO:0007369,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009134,GO:0009135,GO:0009137,GO:0009138,GO:0009140,GO:0009150,GO:0009154,GO:0009164,GO:0009166,GO:0009179,GO:0009181,GO:0009185,GO:0009191,GO:0009193,GO:0009195,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009790,GO:0009987,GO:0010033,GO:0010259,GO:0012505,GO:0016020,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017110,GO:0017111,GO:0018130,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019693,GO:0023052,GO:0030141,GO:0030166,GO:0030968,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0031984,GO:0032501,GO:0032502,GO:0032940,GO:0033554,GO:0034404,GO:0034620,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034656,GO:0034774,GO:0034976,GO:0035295,GO:0035580,GO:0035966,GO:0035967,GO:0036230,GO:0040008,GO:0040009,GO:0042119,GO:0042175,GO:0042221,GO:0042278,GO:0042454,GO:0042581,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043262,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045134,GO:0045321,GO:0046048,GO:0046128,GO:0046130,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046710,GO:0046712,GO:0046872,GO:0046903,GO:0046983,GO:0048565,GO:0048598,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055086,GO:0055123,GO:0060205,GO:0060465,GO:0065007,GO:0070013,GO:0070820,GO:0070887,GO:0071310,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:0097708,GO:0098827,GO:0099503,GO:0101002,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1904724,GO:1904813
EggNOG free text desc.guanosine-diphosphatase activity
EggNOG OGsKOG4494@1,KOG4494@2759
EC3.6.1.6
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionApyrase
Ec32 orthologEc-02_001970.1
Exons3
Model size453
Cds size453
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12404.2042.1prot_H-canaliculatus_F_contig12404.2042.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig12404 456..2159 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928955.9737117-CDS-H-canaliculatus_F_contig12404:455..6211622928955.9737117-CDS-H-canaliculatus_F_contig12404:455..621Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12404 456..621 -
1696845628.791424-CDS-H-canaliculatus_F_contig12404:455..6211696845628.791424-CDS-H-canaliculatus_F_contig12404:455..621Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12404 456..621 -
1622928956.0033162-CDS-H-canaliculatus_F_contig12404:1061..12681622928956.0033162-CDS-H-canaliculatus_F_contig12404:1061..1268Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12404 1062..1268 -
1696845628.803281-CDS-H-canaliculatus_F_contig12404:1061..12681696845628.803281-CDS-H-canaliculatus_F_contig12404:1061..1268Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12404 1062..1268 -
1622928956.0224588-CDS-H-canaliculatus_F_contig12404:2079..21591622928956.0224588-CDS-H-canaliculatus_F_contig12404:2079..2159Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12404 2080..2159 -
1696845628.812665-CDS-H-canaliculatus_F_contig12404:2079..21591696845628.812665-CDS-H-canaliculatus_F_contig12404:2079..2159Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig12404 2080..2159 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig12404.2042.1

>prot_H-canaliculatus_F_contig12404.2042.1 ID=prot_H-canaliculatus_F_contig12404.2042.1|Name=mRNA_H-canaliculatus_F_contig12404.2042.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=151bp
LLAVDDRTGIVFEIVEDEPGERHMAPRYILPEGDGLVDKGMKLEWATEKD
GSLVVGSFGKEFTNDEGQIVNTNNNWIISIDPNGVISREDWTQEYDKLRE
AVGATFPGYMIHESAAWSDALNKWVFLPRRISSEKYNDVRDEKVGESAAR
L
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mRNA from alignment at H-canaliculatus_F_contig12404:456..2159-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig12404.2042.1 ID=mRNA_H-canaliculatus_F_contig12404.2042.1|Name=mRNA_H-canaliculatus_F_contig12404.2042.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1704bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12404:456..2159- (Hapterophycus canaliculatus Oshoro5f female)
CTGCTCGCCGTCGACGACCGTACGGGGATAGTGTTCGAGATCGTGGAGGA
CGAGCCCGGGGAGCGGCACATGGCTCCGAGGTGAGACGGCAGACCGCAGA
CGGGAAGGGTCTGGCACGCCTGTGAGCTACGCAGGGACGACGGAATTTGA
GACGCCCCCCCCCGAACCTTCGCGCCCGACTGGCGGACCCTGCAAGTTTT
AGTGTTGCTTGTTTATTTTTTGTGGAACGAGCCCAGGCTCCCGCCCACTC
TGCCCCCCGACTCGATTGTTTTTTTTTGTTCGAGAAGAGACTCGGCCACG
GGGCGAACCGATCATGGCTCACTCTTTGGGGGGGTGAGCACACGGTCGCG
TCTTCATATCGATGTCGAGATGTCCAGGGAGGTATCGAGAAGTGCGAGTT
TTGGAGAGAGCGTCGTCGCCGTAATCCGATGCTTTCCGCACACGGAAGAT
TGGCGGGGGCACCTCGGCCCCCGCCGCCGTGCTCCCGCACGCACGGCCGG
TGGGCTCTTGTGATAGGATTCGTCGAGCCTCCCCTCTGCAAGGCTCGCAC
CATGGCGAGAATTTTCGGGAGAATTCTGACGAGAATGTTGACGAGATTTT
CCCCGCGAGGAAGGGCGAAAAAAACGCCGCTCCGGTCCTTCACTGGAAGC
GCCGTACGAGTACTACCCAAGATCGCAAGATATGAAAAAAATGAAAAAGA
AAATCGAAAAAGTGAAAAAGAAAATCATAGTCATATCTCGAAGACAAGGA
GGAGACAAATCGGCGTGGAAAATCGGTACAGACGAAATTCACGCCATCTA
GAAGGGTGGTACGTCGAGGGAAAGGCGAAGCCGCTCGCAAACATGGCAAC
ATGGCAGCTCATGGAAAAACGGCGAAAACGTCGAACGAAAGGTACATCTT
GCCGGAGGGAGACGGCCTCGTGGACAAGGGCATGAAGCTGGAGTGGGCGA
CGGAGAAGGACGGTTCCCTGGTCGTGGGGAGCTTTGGGAAGGAGTTCACG
AACGACGAGGGCCAGATCGTGAACACCAACAACAACTGGATCATCTCCAT
CGACCCCAACGGCGTGATCTCGCGGGAGGACTGGACGCAGGAGTACGAGT
GAGACCTGGTTGGCGGCGTTTCTGTCGGGGTTGCTGTTCCTGCTTTGGCT
GGTGCTGGTGCTGTCGCTGCCGGTGCTGCTGTTCCTGTTCTGCCGTCAGG
GTGTTTGCTATCGTTGTCGAGCTTGTCGCCGGGACTCTTCGAAAGCACTC
CGTCCCCTGTTGGCGACAAAGCAAAACCACTCGGTCGCGTTCGCGTTCGT
CCTTGAGCGAGTGTTCCCAATGAGCGCTTGCGTTCAACGCCGATTTCACC
GGCTCGTGGTCAACGCTTCTTTCCTTGCCCTGGGGACAACACTCAAATCC
GGGATCAAATACTCTCCGACCAAAGATGAACCGTAACCCAACCTCTTCCG
CGGCCCCCCCCCCCTTCTTTTTATTTTTCTCGCCCTCGTTCTCCGCGCAC
GCCCGCACCTGCCCGGCGGGCCCTTTGCCGTCGAGCAGCAAGCTCCGCGA
GGCGGTGGGGGCGACCTTCCCCGGCTACATGATCCACGAGTCCGCCGCGT
GGAGCGACGCGCTCAACAAGTGGGTGTTCTTGCCGAGGAGGATCAGCTCC
GAGAAGTACAACGACGTCAGGGACGAGAAGGTGGGAGAGAGCGCGGCTCG
GCTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12404:456..2159-

>mRNA_H-canaliculatus_F_contig12404.2042.1 ID=mRNA_H-canaliculatus_F_contig12404.2042.1|Name=mRNA_H-canaliculatus_F_contig12404.2042.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=906bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12404:456..2159- (Hapterophycus canaliculatus Oshoro5f female)
CTGCTCGCCGTCGACGACCGTACGGGGATAGTGTTCGAGATCGTGGAGGA
CGAGCCCGGGGAGCGGCACATGGCTCCGAGCTGCTCGCCGTCGACGACCG
TACGGGGATAGTGTTCGAGATCGTGGAGGACGAGCCCGGGGAGCGGCACA
TGGCTCCGAGGTACATCTTGCCGGAGGGAGACGGCCTCGTGGACAAGGGC
ATGAAGCTGGAGTGGGCGACGGAGAAGGACGGTTCCCTGGTCGTGGGGAG
CTTTGGGAAGGAGTTCACGAACGACGAGGGCCAGATCGTGAACACCAACA
ACAACTGGATCATCTCCATCGACCCCAACGGCGTGATCTCGCGGGAGGAC
TGGACGCAGGAGTACGAGTACATCTTGCCGGAGGGAGACGGCCTCGTGGA
CAAGGGCATGAAGCTGGAGTGGGCGACGGAGAAGGACGGTTCCCTGGTCG
TGGGGAGCTTTGGGAAGGAGTTCACGAACGACGAGGGCCAGATCGTGAAC
ACCAACAACAACTGGATCATCTCCATCGACCCCAACGGCGTGATCTCGCG
GGAGGACTGGACGCAGGAGTACGACAAGCTCCGCGAGGCGGTGGGGGCGA
CCTTCCCCGGCTACATGATCCACGAGTCCGCCGCGTGGAGCGACGCGCTC
AACAAGTGGGTGTTCTTGCCGAGGAGGATCAGCTCCGAGAAGTACAACGA
CGTCAGGGACGAGAAGGTGGGAGAGAGCGCGGCTCGGCTGCAAGCTCCGC
GAGGCGGTGGGGGCGACCTTCCCCGGCTACATGATCCACGAGTCCGCCGC
GTGGAGCGACGCGCTCAACAAGTGGGTGTTCTTGCCGAGGAGGATCAGCT
CCGAGAAGTACAACGACGTCAGGGACGAGAAGGTGGGAGAGAGCGCGGCT
CGGCTG
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