mRNA_H-canaliculatus_F_contig1226.1938.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Match: A0A6H5LR29_9PHAE (GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR29_9PHAE) HSP 1 Score: 285 bits (728), Expect = 3.250e-83 Identity = 144/292 (49.32%), Postives = 191/292 (65.41%), Query Frame = 1
Query: 2383 MKSKQVPQPDVKKAPTLHWQMLRSRASWKVEETALAEHGVDVFGALAV--------------------------------------------------------MARHFWKNLSPHLEEDVRKTLDRPEVDIFLKQPYVGFHIRRGDKVAEGEAAKVETPKYLEAALKYYQDRSPREAEKIKAIWVASDDKDAVKEVRAIVRDYFPKVADQDVVWISGGADGGAVATRSTSEAYEGFVTVFADLKMLSAASVFVGTYSSNVGRLVALLREGIGGHARETCISLDRTRFGLEY 3090
M K V + D+ +AP +HWQ +R++ +W+ +E AL E+GVD FGAL+V MAR WKNL+P L+EDVRK L+RP++D+F ++P+VG H+RRGDKV EGEA KVET +YL AA +++ +++ ++ + I+AIWVASDD V+EVRAI R YFP V D+D+VW+SGGA GGAV T + S+ Y+GFV VFADLKML+A S+FVGTY+SNV RLVALLREGI GHAR++CISLD+T FGL+Y
Sbjct: 1 MTRKGVSKEDLVEAPKVHWQRIRTQQAWRAQEEALKEYGVDTFGALSVRQQWLSKGPLLLWGIRTEERCPGHAKGAEGCEDLPTAHSAPRREHLRDSFAPDTQVMARLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVGEGEAQKVETKEYLSAAARFFDNKASQDKQDIEAIWVASDDHKVVEEVRAIARQYFPNVLDEDIVWVSGGARGGAVTTHTKSQGYQGFVMVFADLKMLAAGSLFVGTYTSNVSRLVALLREGIHGHARDSCISLDKTEFGLQY 292
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Match: A0A6H5JTL0_9PHAE (GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL0_9PHAE) HSP 1 Score: 267 bits (683), Expect = 4.900e-75 Identity = 145/335 (43.28%), Postives = 203/335 (60.60%), Query Frame = 1
Query: 2080 LFSKEWEESYGSGHAGCDLGRKRYYWRPCGFGSNVVHLLNAFVYAVAVQKWSDVAVISPPGALDALRCTTEFGITVE-GYYCLFKPMPHVCSFGKEKEWIDFMKSKQVPQPDVKKAPTLHWQMLRSRASWKVEETALAEHGVDVFGALAVMARHFWKNLSPHLEEDVRKTLDRPEVDIFLKQPYVGFHIRRGDKVAEGEAAKVETPKYLEAALKYYQDR-SPREAEKIKAIWVASDDKDAVKEVRAIVRDYFPKVADQDVVWISGGADGGA----VATRSTSEAYEGFVTVFADLKMLSAASVFVGTYSSNVGRLVALLREGIGGHARETCISLD 3066
LFS EW Y G AGCDL R + WR G GSNV ++LNA+VYA++V+KWSD+ V+ + + C E G + G+ CLFKPMPH+C+F +E M SK +P+ D+ +A L +R V +L GVD ALA MA++ W N++P L+ DV D+F + P++G HIRRGDKV++GEA+ +YLE A+++ + S IK IWVASD+ + +V+ I +DY P V++ D+ W SGG +GG ATR+ E Y FV FADL+ L+AA +FVGT+SSN+GRL+ LLRE IG R + +S+D
Sbjct: 101 LFSSEWAAEYARGEAGCDLARGSFMWRGHGLGSNVNNMLNAWVYALSVEKWSDMTVVVDENQMKQVDCEEESGGEAQAGWDCLFKPMPHLCTFPSAEE---HMVSKGLPKADLVEAARLDQDAVRFHPEEIV--ASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCEEYLETAVEFLEGNDSQLSVGDIKGIWVASDEPKVIAKVKQIAQDYLPNVSEGDIFWASGGVEGGPEIERTATRTDQETYADFVYTFADLQQLTAADLFVGTFSSNIGRLLVLLRESIGLKDRASAVSID 430
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Match: D7G435_ECTSI (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G435_ECTSI) HSP 1 Score: 263 bits (673), Expect = 1.330e-73 Identity = 141/336 (41.96%), Postives = 200/336 (59.52%), Query Frame = 1
Query: 2080 LFSKEWEESYGSGHAGCDLGRKRYYWRPCGFGSNVVHLLNAFVYAVAVQKWSDVAVISPPGALDALRCTTEFGITVE-GYYCLFKPMPHVCSFGKEKEWIDFMKSKQVPQPDVKKAPTLHWQMLRSRASWKVEETALAEHGVDVFGALAVMARHFWKNLSPHLEEDVRKTLDRPEVDIFLKQPYVGFHIRRGDKVAEGEAAKVETPK-YLEAALKYYQ-DRSPREAEKIKAIWVASDDKDAVKEVRAIVRDYFPKVADQDVVWISGGADGGA----VATRSTSEAYEGFVTVFADLKMLSAASVFVGTYSSNVGRLVALLREGIGGHARETCISLD 3066
LFS EW Y G GCDL R + WR G GSN+ ++LNA+VYA++V+KWSD+ V+ + + C E G + G+ C+FKPMPH+C+F + W ++M SK +P+ ++ + L +R V +L GVD ALA MA++ W N++P L+ DV D+F + P++G HIRRGDKV G A + K YLEAA+++ + D S IK IWVASD+ + +V+ I DY P V++ D+ W SGG +GG ATR+ E Y FV ADL+ L+AA +FVGT+SSN+GRL+ LLRE IG R + +S+D
Sbjct: 105 LFSSEWAVEYARGEEGCDLARGSFMWRGQGLGSNINNMLNAWVYALSVEKWSDMTVVVGENQMKWVDCGEESGGEAQTGWDCIFKPMPHLCTFPSAESWKEYMVSKDLPEAELVEVARLDQDAVRFHPEEIV--ASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVTHGRRASMYLCKEYLEAAVEFLEGDDSQLSVGDIKGIWVASDEPKVIAKVKQIAPDYLPNVSEDDIFWASGGVEGGPEIGRTATRTDKETYADFVYTLADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSID 438
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Match: D8LU00_ECTSI (Similar to putative alpha-6-fucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU00_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 1.990e-18 Identity = 56/148 (37.84%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 2626 YVGFHIRRGDKVAEGEAAKVETPKYLEAALKYYQD-RSPREAEKIKAIWVASDDKDAVKEVRAIVRDYFPKVADQDVVWISGGADGGAVATRSTSEAYEGFVTVFADLKMLSAASVFVGTYSSNVGRLVALLREGIGGHARETCISLD 3066
YVG HIRR DK E V+T YL A+ Y + A I IWV+SDD+ EV+ + ++FP +A V++++GG + + +YE V + A+L+ML+ ++VF GT+SSNVGR+VAL+R+ + E+ +S+D
Sbjct: 6 YVGLHIRRTDKA--NEVQPVKTKAYLAKAVNYLASPTNDMAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGGKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLN-MPDESAVSVD 150
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Match: A0A450SPZ8_9GAMM (FUT8_N_cat domain-containing protein n=1 Tax=Candidatus Kentron sp. DK TaxID=2126562 RepID=A0A450SPZ8_9GAMM) HSP 1 Score: 73.6 bits (179), Expect = 4.760e-10 Identity = 51/149 (34.23%), Postives = 75/149 (50.34%), Query Frame = 1
Query: 2626 YVGFHIRRGDKVAEGEAAKVETPKYLEAALKYYQDRSPREAEKIKAIWVASDDKDAVKEVRAIV-RDY-FPKVADQDVVWISGGADGGAVATRSTSEAYEGFVTVFADLKMLSAASVFVGTYSSNVGRLVALLREGIGGHARETCISLD 3066
Y+G H+RRGDKV GE A +Y + + Y + + ++VA+DD + E R I DY Q+ + G D +S E + + +F D++ LS A FVGT+SSN+GRL+AL R+G + C SLD
Sbjct: 175 YIGVHVRRGDKVTTGEGASFHAAEYSDLIREKYPE--------CRQLFVATDDYAVITEFRNIFPEDYRIMTFCSQERI----GHDQEHFNGKSKYERKKEMIDLFLDIRFLSDAKAFVGTFSSNIGRLIALFRDG------KNCHSLD 305
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Match: A0A813LXS9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LXS9_POLGL) HSP 1 Score: 65.1 bits (157), Expect = 9.150e-8 Identity = 58/189 (30.69%), Postives = 95/189 (50.26%), Query Frame = 1
Query: 2521 AVMARHFWKNLSPHLEEDVRKTLDRPEVDIFLKQPYVGFHIRRGDKVAEGEAAKVETPKYLEAALKYYQDRSPREAEKIKAIWVASDDKDAVKEVR-----AIVRDYFPKVADQDVVWISGGADGGAVATRSTSEAYEGFVTVFADLKMLSAASVFVGTYSSNVGRLVALLREGIGGHARETCISLDRT 3072
AV+A+ F L P ++++TL V + L Y+G HIR GDK E AA +++ KY +A++ + + I +I+VASDD A+ +++ + + P++ D+ + + GA G A + + D+ L + VFVGT SSN+GRLV LR ++ IS+D T
Sbjct: 53 AVLAKFFM--LKPKASAEIQQTL----VSLNLGGDYIGIHIRHGDKGIE--AALIDSAKYARSAIEAAYNYN------ITSIFVASDDPMALNDLQNALPSTVTAKWAPRLGDKTYHYEAIGASGSNDAN----------LALLTDVVGLLQSKVFVGTASSNIGRLVYNLRTE---DQKQQAISMDLT 214
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Match: R7QMX9_CHOCR (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMX9_CHOCR) HSP 1 Score: 64.7 bits (156), Expect = 9.500e-8 Identity = 60/185 (32.43%), Postives = 89/185 (48.11%), Query Frame = 1
Query: 2527 MARHFWKNLSPHLEEDVRKTLDRPEVDIFLKQPYVGFHIRRGDKVAEGEAAKVETPKYLEAALKYYQDRSPREAEKIKAIWVASDDKDAVKEVRAIVRDYFPKVADQDVVWISGGADGGAVATRSTS-----EAYEGFVTVFADLKMLSAASVFVGTYSSNVGRLVALLREGIGGHARETCISLD 3066
+A+ W+ L+ VR L+ E ++ YVG H+RRGDK E A V +Y A + A++VA+DD +V+ +R ++ A + VV I G G +T+ E Y V + A+++ L A VFVGT+SSN+GRLV +LREG +SLD
Sbjct: 11 LAKRLWR-LNEATAAAVRVVLE--EASVWGAGEYVGVHVRRGDK--SKEVADVPLWRYAAAVRAVSGEEM--------AVFVAADDGASVRGLRQLL-------AGRKVVAIRGAEGRGGHDQLATNRGYMKENYGRVVELLAEVEALRGAKVFVGTFSSNLGRLVHVLREG----DERNSVSLD 171
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Match: A0A4Y7NIW5_9CRUS (Alpha-(1,6)-fucosyltransferase n=1 Tax=Megafenestra aurita TaxID=2291010 RepID=A0A4Y7NIW5_9CRUS) HSP 1 Score: 65.5 bits (158), Expect = 6.620e-7 Identity = 51/167 (30.54%), Postives = 80/167 (47.90%), Query Frame = 1
Query: 2566 EEDVRKTLDRPEVDIFLKQPYVGFHIRRGDKVAEGEAAKVETPKYLEAALKYYQDRSPREAEKIKAIWVASDDKDAVKEVRAIVRDYFPKVADQDVVWISGGADGGAVATRSTSEAYEGFVTVFADLKMLSAASVFVGTYSSNVGRLVALLREGIGGHARETCISLD 3066
+ D +K LD+ + + K P VG H+RR DKV EAA +Y+ Y+ RE +++ +++ASDD + E + +Y + D + A G AVATR T + G + D+ ML+ + V T+SS V RL + + + A SLD
Sbjct: 353 QPDTQKMLDQAKEKMNFKNPVVGIHVRRTDKVGT-EAAFHSIDEYMLHVADYFNKLEMREKVEVRRVYLASDDPSVLPEAKKKYPEY-EFLGDVSI------AKGAAVATRYTDSSLRG---ILLDIHMLAHSDHLVCTFSSQVCRLAYEIMQTLHPDASNKFKSLD 508
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Match: A0A7S2BG18_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2BG18_9DINO) HSP 1 Score: 60.8 bits (146), Expect = 1.070e-6 Identity = 58/179 (32.40%), Postives = 88/179 (49.16%), Query Frame = 1
Query: 2572 DVRKTLDRPEVDIFLKQPYVGFHIRRGDKVA--EGEAAKVETPKYLEAALKYYQDRSPREAEKIKAIWVASDDKDAVKEVRAIVRDYFPKVADQDVVWISGGA------------DGGAVATRSTSEAYEGFVTVFADLKMLSAASVFVGTYSSNVGRLVALLREGIGGHARETCISLD 3066
D ++ ++ ++ L +V IRRGDKVA E+ KV P Y++AAL++ + I V +DD A +E A VR P + V W + A D A++ R + F+ AD++++ + V + T+SSNVGRLVA+LR+G ET ISLD
Sbjct: 10 DTKRRIETLNRELSLPSAFVAVQIRRGDKVAGKRRESLKVTMPDYVKAALQHCKPPCA-------TIAVCTDDISAAEEFAAGVRKEKPGI---QVRWRARKATPEHLRQGHKQDDWNALSMRDREALTQEFL---ADVEVMRTSRVLICTFSSNVGRLVAMLRDG------ET-ISLD 168
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Match: A0A813IY59_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IY59_POLGL) HSP 1 Score: 63.9 bits (154), Expect = 2.450e-6 Identity = 66/214 (30.84%), Postives = 90/214 (42.06%), Query Frame = 1
Query: 2482 ALAEHGVDV-FGALAVMARHFWKNLSPHLEEDVRKTLDRPEVDIFLKQPYVGFHIRRGDKVA--EGEAAKVETPKYLEAALKYYQDRSPREAEKIKAIWVASDDKDAVKEVRAIVRDYFPKVADQDVVWISGG------------ADGGAVATRSTSEAYEGFVTVFADLKMLSAASVFVGTYSSNVGRLVALLREGIGGHARETCISLDRTRF 3078
A+ +H V F A + R W+ S D +D + L YV H+R GDKVA E+ V T Y + AL + I V +DD A +E VR P DV W S AD A+ + F+ AD+++L ASV + TYSSNVGRLVALLR+G +S+D+ +
Sbjct: 654 AVCKHAKKVSFAEKAKVTRQVWRYTS-----DTANRIDLLNEEFDLPTSYVAVHVRCGDKVAGKRKESVSVTTADYAKEALSHL-------GRNCSVIAVCTDDLSAAEEFGEAVRKLRPMA---DVRWRSRKDIPEELRHGHWQADYNALRVEDRVGMTQEFL---ADVEVLRGASVTICTYSSNVGRLVALLRDG-------PTVSMDQAEW 842 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1226.1938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1226.1938.1 >prot_H-canaliculatus_F_contig1226.1938.1 ID=prot_H-canaliculatus_F_contig1226.1938.1|Name=mRNA_H-canaliculatus_F_contig1226.1938.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=397bp MTLERRRVLAFAFCCAILSVPFFRQLYFRKCETLPRLEEVGAHENLVGTGback to top mRNA from alignment at H-canaliculatus_F_contig1226:3845..13761+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1226.1938.1 ID=mRNA_H-canaliculatus_F_contig1226.1938.1|Name=mRNA_H-canaliculatus_F_contig1226.1938.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=9917bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1226:3845..13761+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1226:3845..13761+ >mRNA_H-canaliculatus_F_contig1226.1938.1 ID=mRNA_H-canaliculatus_F_contig1226.1938.1|Name=mRNA_H-canaliculatus_F_contig1226.1938.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2382bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1226:3845..13761+ (Hapterophycus canaliculatus Oshoro5f female)back to top |