mRNA_H-canaliculatus_F_contig10162.187.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10162.187.1
Unique NamemRNA_H-canaliculatus_F_contig10162.187.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 7.850e-31
Identity = 75/158 (47.47%), Postives = 96/158 (60.76%), Query Frame = 1
Query:    1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438
            LLRP++++AV  LR+H      +D DGMAMYFAIG+ K G           T +R V  T+ +         LL   C SP+LA SV LEF +R N+RM++KN  LP  LGGHYNQ+ VE IQR TA+WD+  P+FP  PAA DS+  G R  L RS+
Sbjct:  607 LLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKHGL----------TDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFPEWPAAIDSVDTGERFGLERSL 754          
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5KSM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM2_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 3.750e-21
Identity = 56/134 (41.79%), Postives = 77/134 (57.46%), Query Frame = 1
Query:    1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLPLGGHYNQHDVELIQRVTANWDAQRPIF 372
            LLRP+++ AV LLRRH    R +D + +A+Y+  G+T  G           T  R V  T++          LL   C SPALAHS+ LEFK R N++M VKNL   +GG ++Q D+E+IQR T +WD   P+F
Sbjct:  306 LLRPKAMDAVNLLRRHIEADRLSDPNDVALYYTTGKTTGGI----------TSRRCVRGTNSTEGYHRLLLRLLSTYCASPALAHSILLEFKHRWNIKMAVKNLSKEIGGCFDQFDIEIIQRETTSWDPDCPVF 429          
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 4.450e-20
Identity = 60/126 (47.62%), Postives = 76/126 (60.32%), Query Frame = 1
Query:    1 LLRPQSVRAVGLLRRHR-GRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVT 342
            LLRP+S++AV LLR+H      +D DG+AMY+A+G+T DG             +R V  T+ +         LL   C SPALA SV LEF FR N++M+VKN  LP  LG HYNQH VE+IQR T
Sbjct:  651 LLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTTDGLVN----------YRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQHLVEIIQRAT 766          
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5KP32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP32_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.490e-19
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 1
Query:  184 LLLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438
            LLL   C SPALAHS+ LEF  R N++M VKN +LP  +GG ++Q D+E+IQR T +WD   P+F    +A D+   G RS LA+S+
Sbjct:   83 LLLSTYCASPALAHSILLEFNHRWNIKMAVKNRNLPKEIGGCFDQFDIEIIQRETTSWDLDSPVFSERVSALDAADTGQRSGLAQSM 169          
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5K9U3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U3_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 5.580e-19
Identity = 60/158 (37.97%), Postives = 83/158 (52.53%), Query Frame = 1
Query:    1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438
            LLR  +++ V LL +H      +D +G+ +Y+  G+   G  T           R V  T+           LL   C SPALAHSV LEF FR NVRM VKN  LP  +G  ++Q++ E+IQR TA+W    P+FP   +A D    G RS L++S+
Sbjct:   14 LLRSDAMKDVNLLLKHIETGCLSDPEGVPLYYPTGQNAAGITT----------HRCVRGTNCTEGYHRYLRRLLSSYCASPALAHSVLLEFNFRWNVRMAVKNRGLPREVGEFFDQYETEIIQRDTASWYPDNPLFPEWVSALDVADTGERSGLSQSM 161          
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.620e-18
Identity = 59/158 (37.34%), Postives = 84/158 (53.16%), Query Frame = 1
Query:    1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438
            LLRP + +AV LLR+H      +D + + +Y+  G+   G  T           R V  T+           LL   C SP+LAHSV LEF +R NVRM VKN  LP  +G  ++Q ++E+IQR TA+W    P+FP   +A D+   G +S L+ S+
Sbjct:  287 LLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSAGITTR----------RCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESL 434          
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 4.280e-17
Identity = 60/150 (40.00%), Postives = 78/150 (52.00%), Query Frame = 1
Query:    1 LLRPQSVRAVGLLRRHR-GRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTLLLDHCC---VSPALAHSVFLEFKFRQNVRMIVKNLDLPLGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438
            LLRP+S++AV LLR+H      +D DG+AMY+AIG+T DG             +R V  T+ +   H      SPALA SV LEF FR N++M+VKN D                     WD   P+FP+  AA DS+  G RS L RS+
Sbjct:  899 LLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGKTTDGL----------VRYRCVRGTNDVEGYHLASYSASPALAQSVLLEFNFRWNLKMMVKNRD---------------------WDPSFPVFPQWQAAVDSVDTGERSGLGRSL 1017          
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 7.430e-17
Identity = 57/149 (38.26%), Postives = 80/149 (53.69%), Query Frame = 1
Query:    1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTLLLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438
            LLRP + +AV LLR+H      +D + + +Y+    TK    TT                   LL   C SP+LAHSV LEF +R NVRM VKN  LP  +G  ++Q ++E+IQR TA+W    P+FP   +A D+   G +S L+ S+
Sbjct:  287 LLRPCARQAVELLRKHIESGCLSDPERVPLYY----TKSAGITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESL 431          
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5K811_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K811_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 5.970e-13
Identity = 54/158 (34.18%), Postives = 78/158 (49.37%), Query Frame = 1
Query:    1 LLRPQSVRAVGLLRRH-RGRRTTDSDGMAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTL---------LLDHCCVSPALAHSVFLEFKFRQNVRMIVKNLDLP--LGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438
            LL P +++AVGLLR H R    +D  G+ +YF  G+T  G           T +R V  T++          LL   C SP + H+V +EF  R N+   V+N  +   +GG  +Q+ ++ IQR TA W   +P+F    A  D    G R+ LA SV
Sbjct:  361 LLSPAAMKAVGLLREHIRLGCFSDPVGVPLYFERGKTSTGL----------TRFRCVRGTNSTEGYHRYLKTLLAAFCASPEVCHTVLMEFNHRWNISRAVENRGMAAEIGGFSHQYMIDHIQRATAEWYPDQPLFSGWVAPADFEDSGERAGLAASV 508          
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Match: A0A6H5JQG2_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 7.700e-8
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 1
Query:  187 LLDHCCVSPALAHSVFLEFKFRQNVRMIVKN--LDLPLGGHYNQHDVELIQRVTANWDAQRPIFPR*PAAFDSMGLGGRSRLARSV 438
            LL + C SP + H+V +EF  R N+   V+N  +   +G   +Q+ ++ IQRVTA W   +P+F    A  D    G R+ LA SV
Sbjct:  752 LLAYFCASPEVCHTVLMEFNHRWNISRTVENRGMSAEIGRFSHQYMIDHIQRVTAEWYPDQPLFSGWVAPADFEDSGERTNLAASV 837          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10162.187.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JRJ6_9PHAE7.850e-3147.473'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KSM2_9PHAE3.750e-2141.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3Q9_ECTSI4.450e-2047.623'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KP32_9PHAE2.490e-1949.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9U3_9PHAE5.580e-1937.97Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPK9_9PHAE1.620e-1837.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4M0_9PHAE4.280e-1740.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLP1_9PHAE7.430e-1738.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K811_9PHAE5.970e-1334.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQG2_9PHAE7.700e-837.213'-5' exonuclease domain-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10162contigH-canaliculatus_F_contig10162:103..761 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score76.6
Seed ortholog evalue7.2e-12
Seed eggNOG ortholog2880.D7G3Q9
Preferred nameWRN
KEGG koko:K10900,ko:K20777
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Hectar predicted targeting categoryother localisation
Exons2
Model size438
Cds size303
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10162.187.1prot_H-canaliculatus_F_contig10162.187.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10162 160..683 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928645.763084-UTR-H-canaliculatus_F_contig10162:102..1591622928645.763084-UTR-H-canaliculatus_F_contig10162:102..159Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10162 103..159 -
1696845511.1793997-UTR-H-canaliculatus_F_contig10162:102..1591696845511.1793997-UTR-H-canaliculatus_F_contig10162:102..159Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10162 103..159 -
1622928645.7987533-UTR-H-canaliculatus_F_contig10162:683..7611622928645.7987533-UTR-H-canaliculatus_F_contig10162:683..761Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10162 684..761 -
1696845511.2248044-UTR-H-canaliculatus_F_contig10162:683..7611696845511.2248044-UTR-H-canaliculatus_F_contig10162:683..761Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig10162 684..761 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928645.7730203-CDS-H-canaliculatus_F_contig10162:159..3791622928645.7730203-CDS-H-canaliculatus_F_contig10162:159..379Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10162 160..379 -
1696845511.1991518-CDS-H-canaliculatus_F_contig10162:159..3791696845511.1991518-CDS-H-canaliculatus_F_contig10162:159..379Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10162 160..379 -
1622928645.7835484-CDS-H-canaliculatus_F_contig10162:600..6831622928645.7835484-CDS-H-canaliculatus_F_contig10162:600..683Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10162 601..683 -
1696845511.2164817-CDS-H-canaliculatus_F_contig10162:600..6831696845511.2164817-CDS-H-canaliculatus_F_contig10162:600..683Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10162 601..683 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10162.187.1

>prot_H-canaliculatus_F_contig10162.187.1 ID=prot_H-canaliculatus_F_contig10162.187.1|Name=mRNA_H-canaliculatus_F_contig10162.187.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=101bp
MAMYFAIGRTKDGFPTTAIASEEPTMWRVVTATSTLLLDHCCVSPALAHS
VFLEFKFRQNVRMIVKNLDLPLGGHYNQHDVELIQRVTANWDAQRPIFPR
*
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mRNA from alignment at H-canaliculatus_F_contig10162:103..761-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10162.187.1 ID=mRNA_H-canaliculatus_F_contig10162.187.1|Name=mRNA_H-canaliculatus_F_contig10162.187.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=659bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10162:103..761- (Hapterophycus canaliculatus Oshoro5f female)
CTTCTGCGCCCGCAATCGGTGAGAGCTGTGGGCCTGCTGCGAAGGCATCG TGGCCGACGCACGACCGATTCTGACGGTATGGCGATGTACTTCGCCATTG GCAGGACCAAGGATGGCTTCCCAACTACTGCTATTGCGTCCGAGGAACCA ACGATGTGGAGGTGAGAGTTTTTGCAATTTTGAGCTGCGATTGGTTTCTA GTACGAGTAGTGTTTTCGTGTGACGAGGCCAGGATTCGTACACCAGAACG TTGCTACAATCTTAACCCTTAAATTTGTTCGTTGTGCGTTTTGGGACTCA AATATAGCATAGGCTGCAGGATCATGCCCCAATGATGAGTGCCATCCCTC TTGTCACGTCTTTGCTGCCCTCTGTTCAGCAGGGTTGTCACCGCTACCTC CACACTCTTGCTGGACCACTGCTGCGTGTCGCCGGCACTCGCGCACTCGG TATTTCTGGAGTTCAAGTTTCGGCAAAATGTGAGGATGATTGTCAAAAAC CTTGACTTGCCGCTGGGAGGGCACTACAACCAGCACGATGTCGAGCTGAT TCAGCGGGTGACGGCGAACTGGGACGCGCAGAGGCCCATCTTCCCGCGGT GACCAGCCGCTTTCGATTCGATGGGCCTAGGCGGGAGGAGCAGGCTCGCC CGGAGCGTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10162:103..761-

>mRNA_H-canaliculatus_F_contig10162.187.1 ID=mRNA_H-canaliculatus_F_contig10162.187.1|Name=mRNA_H-canaliculatus_F_contig10162.187.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=606bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10162:103..761- (Hapterophycus canaliculatus Oshoro5f female)
ATGGCGATGTACTTCGCCATTGGCAGGACCAAGGATGGCTTCCCAACTAC
TGCTATTGCGTCCGAGGAACCAACGATGTGGAGATGGCGATGTACTTCGC
CATTGGCAGGACCAAGGATGGCTTCCCAACTACTGCTATTGCGTCCGAGG
AACCAACGATGTGGAGGGTTGTCACCGCTACCTCCACACTCTTGCTGGAC
CACTGCTGCGTGTCGCCGGCACTCGCGCACTCGGTATTTCTGGAGTTCAA
GTTTCGGCAAAATGTGAGGATGATTGTCAAAAACCTTGACTTGCCGCTGG
GAGGGCACTACAACCAGCACGATGTCGAGCTGATTCAGCGGGTGACGGCG
AACTGGGACGCGCAGAGGCCCATCTTCCCGCGGTGAGGTTGTCACCGCTA
CCTCCACACTCTTGCTGGACCACTGCTGCGTGTCGCCGGCACTCGCGCAC
TCGGTATTTCTGGAGTTCAAGTTTCGGCAAAATGTGAGGATGATTGTCAA
AAACCTTGACTTGCCGCTGGGAGGGCACTACAACCAGCACGATGTCGAGC
TGATTCAGCGGGTGACGGCGAACTGGGACGCGCAGAGGCCCATCTTCCCG
CGGTGA
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