mRNA_H-canaliculatus_F_contig10154.178.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10154.178.1
Unique NamemRNA_H-canaliculatus_F_contig10154.178.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Match: D8LMK5_ECTSI (Similar to tripeptidylpeptidase II n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK5_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.830e-50
Identity = 88/100 (88.00%), Postives = 92/100 (92.00%), Query Frame = 1 
Query:    4 RWCTLVAPSKGTISALGARDVTPDGRQTFALLLEYSFRQVDAGGEVTPRLAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPEATKLAKGEHIVRVQV 303
            +WCTLVAPSKGTISALG RDVTPDGRQT+ LLLEYSF+Q DAG EVTPRLAALNG LYDSAYEAQMCM FDSNKKLLAV+DCWPEATKLAKGEH VRV V
Sbjct:  862 KWCTLVAPSKGTISALGPRDVTPDGRQTYGLLLEYSFKQADAG-EVTPRLAALNGYLYDSAYEAQMCMIFDSNKKLLAVNDCWPEATKLAKGEHTVRVHV 960
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BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Match: A0A4D9D6J9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6J9_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.510e-21
Identity = 49/101 (48.51%), Postives = 59/101 (58.42%), Query Frame = 1 
Query:    4 RWCTLVAPSKGTISALGA-RDVTPDGRQTFALLLEYSFRQVDAGGEVTPRLAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPEATKLAKGEHIVRVQV 303
            RW T + P   +I AL   RDV PDG+Q + LLLEY F     G EV PR   LNG LY+S  E+Q  M FD+NKK L   D WP   K  KGE+++R  V
Sbjct:  868 RWQTKLTPDSSSIKALDPDRDVLPDGKQIYQLLLEYKFTTETGGDEVIPRAMLLNGVLYESPLESQFFMAFDANKKYLGCGDAWPGKVKCPKGENVLRYSV 968
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BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Match: W4HE85_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HE85_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.410e-21
Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = 1 
Query:    1 TRWCTLVAPSKGTISALGARDVTPDGRQTFALLLEYSFRQVDAGGEVTPRLAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPEATKLAKGEHIVRVQV 303
            T+W   + P    +S LG+RDV  D R  + L+L Y+F QV+ G +VTP L  LNG LY+S +E+Q+ + FD+ KK L V D +P  T L KG++++R QV
Sbjct:  800 TKWTQRLRPDSAVVSTLGSRDVFADNRHVYQLVLTYTFEQVEEG-KVTPSLPLLNGRLYESPFESQLILIFDTKKKYLGVSDAYPRPTSLKKGKYVLRAQV 899
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BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Match: A0A6G0XEP0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEP0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.010e-20
Identity = 42/100 (42.00%), Postives = 65/100 (65.00%), Query Frame = 1 
Query:    4 RWCTLVAPSKGTISALGARDVTPDGRQTFALLLEYSFRQVDAGGEVTPRLAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPEATKLAKGEHIVRVQV 303
            +W   + P    +S LG+RDV  D R  + L+L YSF +V+ G ++TP L  LNG LY+S +E+Q+ + FD+NKK +   D +P +T L KG++++R QV
Sbjct:  803 KWTQRLRPDSAVVSPLGSRDVFDDNRHVYQLVLTYSFEKVEEG-KITPTLPLLNGRLYESPFESQLILIFDTNKKYIGCSDAYPRSTNLKKGKYVLRAQV 901
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BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Match: A0A3M6TNJ5_POCDA (Tripeptidyl-peptidase 2 n=3 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TNJ5_POCDA)

HSP 1 Score: 93.2 bits (230), Expect = 5.590e-20
Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = 1 
Query:   19 VAPSKGTISALGARDVTPDGRQTFALLLEYSFRQVDAGGEVTPRLAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPE--ATKLAKGEHIVRVQV 303
            V PS+  I+ALG+RDV P+GRQ FAL L Y+F Q  AG EV+P    L+  LY+S YE+Q+ M FDSNK++L   D +P+  + KL KG++++++QV
Sbjct:  745 VRPSEYKINALGSRDVLPNGRQIFALTLTYNFHQSKAG-EVSPNATYLSDLLYESEYESQLWMIFDSNKRMLGSGDAFPDRYSVKLEKGDYVLKLQV 840
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BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Match: A0A485KTC6_9STRA (Aste57867_11347 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTC6_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.610e-20
Identity = 43/101 (42.57%), Postives = 64/101 (63.37%), Query Frame = 1 
Query:    1 TRWCTLVAPSKGTISALGARDVTPDGRQTFALLLEYSFRQVDAGGEVTPRLAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPEATKLAKGEHIVRVQV 303
            T+W   + P    +S LG+RDV  D R  + L+L YS  + +  G++TP+L  LN  LYDS +EAQ+ + FD+NKK +   D +P AT L KG++++R QV
Sbjct:  851 TKWTQRLRPDSAVVSPLGSRDVFDDNRHVYQLVLTYSLDKAE-DGKITPKLPLLNDRLYDSPFEAQLILIFDTNKKYIGCSDAFPRATSLKKGKYVLRAQV 950
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BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Match: A0A7S1ZE81_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZE81_TRICV)

HSP 1 Score: 86.3 bits (212), Expect = 6.820e-20
Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 1 
Query:    1 TRWCTLVAP-SKGTISALGARDVTPD-GRQTFALLLEYSFRQVDAGGEVTPRLAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPEATKLAKGEHIVRVQV 303
            T+W T + P + G IS LG RD+ P   +Q   L+L Y F+Q + G   TPR+ AL G LY+SAYEAQM + FD +KK +   D WP+  +  KG   +R+QV
Sbjct:    1 TKWKTCLRPKTDGVISPLGERDIWPSQDKQIHQLVLTYEFKQEEKG-TFTPRIPALQGFLYESAYEAQMMLIFDGDKKYIGAADAWPKEVQAYKGTVTIRLQV 102
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BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Match: A0A3R6YC79_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YC79_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.040e-19
Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:    4 RWCTLVAPSKGTISALGARDVTPDGRQTFALLLEYSFRQVDAGGEVTPRLAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPEATKLAKGEHIVRVQV 303
            +W   + P    +S LG+RDV  D R  + L+L YSF + + G ++TP L  LNG LY+S +E+Q+ + FD+NKK L   D +P +T L KG+ I+R QV
Sbjct:  714 KWTQRLRPDSAVVSTLGSRDVFDDNRHMYQLVLTYSFEKAEEG-KITPSLPLLNGRLYESPFESQLILIFDTNKKYLGCSDAYPRSTSLKKGKFILRAQV 812
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BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Match: A0A2B4SVI3_STYPI (Tripeptidyl-peptidase 2 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SVI3_STYPI)

HSP 1 Score: 89.4 bits (220), Expect = 1.260e-18
Identity = 47/95 (49.47%), Postives = 68/95 (71.58%), Query Frame = 1 
Query:   25 PSKGTISALGARDVTPDGRQTFALLLEYSFRQVDAGGEVTPRLAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPE--ATKLAKGEHIVRVQV 303
            PS+  I+ALG+RDV P+GRQ FAL L Y+F Q  AG EV+  +  L+  LY+S YE+Q+ M FDSNK+LL   D +P+  + KL KG++++++QV
Sbjct:  797 PSEYKINALGSRDVLPNGRQIFALTLTYNFHQSKAG-EVSVDVTYLSDLLYESEYESQLWMIFDSNKRLLGSGDAFPDRYSVKLEKGDYVLKLQV 890
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BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Match: UPI0009E23123 (tripeptidyl-peptidase 2-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E23123)

HSP 1 Score: 89.4 bits (220), Expect = 1.270e-18
Identity = 46/98 (46.94%), Postives = 68/98 (69.39%), Query Frame = 1 
Query:   16 LVAPSKGTISALGARDVTPDGRQTFALLLEYSFRQVDAGGEVTPRLAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPE--ATKLAKGEHIVRVQV 303
            LV PS+  IS LG+RDV P+GRQ +AL L Y+F Q  AG EV+P    L+  LY+S YE+Q+ M FDSNK++L   D + +  + K+ KG++++++QV
Sbjct: 1131 LVRPSEHKISPLGSRDVLPNGRQIYALTLTYNFHQSKAG-EVSPNATYLSDLLYESEYESQLWMIFDSNKRMLGSGDAFADRYSVKVEKGDYVLKLQV 1227
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10154.178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMK5_ECTSI1.830e-5088.00Similar to tripeptidylpeptidase II n=2 Tax=Ectocar... [more]
A0A4D9D6J9_9STRA2.510e-2148.51Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W4HE85_9STRA3.410e-2144.55Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A6G0XEP0_9STRA3.010e-2042.00Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A3M6TNJ5_POCDA5.590e-2049.48Tripeptidyl-peptidase 2 n=3 Tax=Pocillopora damico... [more]
A0A485KTC6_9STRA5.610e-2042.57Aste57867_11347 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S1ZE81_TRICV6.820e-2044.66Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A3R6YC79_9STRA1.040e-1943.00Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2B4SVI3_STYPI1.260e-1849.47Tripeptidyl-peptidase 2 n=2 Tax=Stylophora pistill... [more]
UPI0009E231231.270e-1846.94tripeptidyl-peptidase 2-like n=1 Tax=Orbicella fav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10154contigH-canaliculatus_F_contig10154:3530..4122 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score180.6
Seed ortholog evalue3.5e-43
Seed eggNOG ortholog2880.D8LMK5
Preferred nameTPP2
KEGG koko:K01280
GOsGO:0000209,GO:0003674,GO:0003824,GO:0004175,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008240,GO:0009507,GO:0009536,GO:0009987,GO:0010883,GO:0010884,GO:0016020,GO:0016043,GO:0016567,GO:0016604,GO:0016787,GO:0017171,GO:0019538,GO:0022607,GO:0022626,GO:0031090,GO:0031974,GO:0031981,GO:0032446,GO:0032879,GO:0032991,GO:0033218,GO:0036211,GO:0042277,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044451,GO:0044464,GO:0048518,GO:0050789,GO:0051259,GO:0051260,GO:0065003,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070647,GO:0071704,GO:0071840,GO:0098588,GO:0098805,GO:0140096,GO:1901564,GO:1905952,GO:1905954,GO:1990904
EggNOG free text desc.tripeptidyl-peptidase activity
EggNOG OGsCOG1404@1,KOG1114@2759
EC3.4.14.10
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03110
Hectar predicted targeting categoryother localisation
Exons2
Model size303
Cds size303
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928644.6581547-CDS-H-canaliculatus_F_contig10154:3529..36041622928644.6581547-CDS-H-canaliculatus_F_contig10154:3529..3604Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10154 3530..3604 -
1696845510.5138998-CDS-H-canaliculatus_F_contig10154:3529..36041696845510.5138998-CDS-H-canaliculatus_F_contig10154:3529..3604Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10154 3530..3604 -
1622928644.67137-CDS-H-canaliculatus_F_contig10154:3894..41221622928644.67137-CDS-H-canaliculatus_F_contig10154:3894..4122Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10154 3895..4122 -
1696845510.5318923-CDS-H-canaliculatus_F_contig10154:3894..41221696845510.5318923-CDS-H-canaliculatus_F_contig10154:3894..4122Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10154 3895..4122 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10154.178.1prot_H-canaliculatus_F_contig10154.178.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10154 3530..4122 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10154.178.1

>prot_H-canaliculatus_F_contig10154.178.1 ID=prot_H-canaliculatus_F_contig10154.178.1|Name=mRNA_H-canaliculatus_F_contig10154.178.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=101bp
TRWCTLVAPSKGTISALGARDVTPDGRQTFALLLEYSFRQVDAGGEVTPR
LAALNGCLYDSAYEAQMCMTFDSNKKLLAVDDCWPEATKLAKGEHIVRVQ
V
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mRNA from alignment at H-canaliculatus_F_contig10154:3530..4122-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10154.178.1 ID=mRNA_H-canaliculatus_F_contig10154.178.1|Name=mRNA_H-canaliculatus_F_contig10154.178.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=593bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10154:3530..4122- (Hapterophycus canaliculatus Oshoro5f female)
ACAAGGTGGTGCACTCTCGTGGCCCCCTCGAAGGGGACCATCTCCGCCCT
GGGAGCGCGGGACGTCACCCCCGACGGCCGGCAGACGTTCGCGCTCCTGC
TGGAGTACTCGTTCAGGCAGGTGGACGCGGGGGGGGAGGTCACCCCCCGC
CTGGCGGCGCTGAACGGCTGCCTCTACGACAGCGCTTACGAGGCGCAGAT
GTGCATGACCTTCGACTCCAACAAGAAGGTTTGGGTGTGGCGTATTGTGG
CTGTGGCTGTGGCTGTGGCTGTGGTGCGGGATGCGGTGCGGCAAGGGCCG
GCTTGATGAAGCGTACAGAACTTGTTTTCGTCTTTTTTGTCACCCATCTC
CGTGTTTTTTAGTTCTGTGCTTGCCGCCCTCCGATCGGTCGCTCCCTGAC
CCACCGCTGGCTTCTTCCTGCTCCGTACTCCCGCCGCCACCGCCGCCGCC
GCCGGCCTTGACGTCGTTACACCCGACCACGATATCGAAAACAAACACCA
ACAACGACGGGGCGGCAGCTGCTTGCGGTGGACGACTGCTGGCCGGAGGC
GACCAAGCTGGCCAAGGGGGAGCACATCGTCAGGGTGCAGGTC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10154:3530..4122-

>mRNA_H-canaliculatus_F_contig10154.178.1 ID=mRNA_H-canaliculatus_F_contig10154.178.1|Name=mRNA_H-canaliculatus_F_contig10154.178.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=606bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10154:3530..4122- (Hapterophycus canaliculatus Oshoro5f female)
ACAAGGTGGTGCACTCTCGTGGCCCCCTCGAAGGGGACCATCTCCGCCCT
GGGAGCGCGGGACGTCACCCCCGACGGCCGGCAGACGTTCGCGCTCCTGC
TGGAGTACTCGTTCAGGCAGGTGGACGCGGGGGGGGAGGTCACCCCCCGC
CTGGCGGCGCTGAACGGCTGCCTCTACGACAGCGCTTACGAGGCGCAGAT
GTGCATGACCTTCGACTCCAACAAGAAGACAAGGTGGTGCACTCTCGTGG
CCCCCTCGAAGGGGACCATCTCCGCCCTGGGAGCGCGGGACGTCACCCCC
GACGGCCGGCAGACGTTCGCGCTCCTGCTGGAGTACTCGTTCAGGCAGGT
GGACGCGGGGGGGGAGGTCACCCCCCGCCTGGCGGCGCTGAACGGCTGCC
TCTACGACAGCGCTTACGAGGCGCAGATGTGCATGACCTTCGACTCCAAC
AAGAAGCTGCTTGCGGTGGACGACTGCTGGCCGGAGGCGACCAAGCTGGC
CAAGGGGGAGCACATCGTCAGGGTGCAGGTCCTGCTTGCGGTGGACGACT
GCTGGCCGGAGGCGACCAAGCTGGCCAAGGGGGAGCACATCGTCAGGGTG
CAGGTC
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