prot_H-canaliculatus_F_contig12019.1770.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12019.1770.1
Unique Nameprot_H-canaliculatus_F_contig12019.1770.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length126
Homology
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BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Match: A0A6H5JHX5_9PHAE (Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX5_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 5.290e-24
Identity = 49/71 (69.01%), Postives = 59/71 (83.10%), Query Frame = 0 
Query:    3 SDEWEELLGSSVRKSIVVNGDGDSPDLGSLVLFSWKGNVLLDDNAT-GETFAERDRVTARIGDGDEVPGRE 72
            SD+WEELLGS+VRK +VV+GDG+SPDLGSLVLF+W G+ LLD+  T G  FA R+R  ARIGDGDE+PG E
Sbjct:    5 SDQWEELLGSAVRKKVVVDGDGESPDLGSLVLFTWTGSPLLDNGTTTGVPFAHRERARARIGDGDEIPGVE 75
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12019.1770.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHX5_9PHAE5.290e-2469.01Peptidylprolyl isomerase n=1 Tax=Ectocarpus sp. CC... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12019contigH-canaliculatus_F_contig12019:1306..2537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12019.1770.1mRNA_H-canaliculatus_F_contig12019.1770.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12019 1219..3544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12019.1770.1 ID=prot_H-canaliculatus_F_contig12019.1770.1|Name=mRNA_H-canaliculatus_F_contig12019.1770.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=126bp
MGSDEWEELLGSSVRKSIVVNGDGDSPDLGSLVLFSWKGNVLLDDNATGE
TFAERDRVTARIGDGDEVPGREKVEAGGRGWGLRVPDIHPRAREHRGEGR
EWKTRVQTKRPCPQIVSEVPVCDTR*
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