mRNA_H-canaliculatus_F_contig1196.1713.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 187 bits (476), Expect = 1.680e-54 Identity = 86/150 (57.33%), Postives = 112/150 (74.67%), Query Frame = 1
Query: 7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
L+ LV+++ WFP DV+GRQ +PVELKVL+ L L RGN F D+ S +S + ++FHRF K FA E Y ++V+LPTGED KVME+YD +GF GA+GSTDVTH+ W CP++ AR ++GKEG T+A+Q TVDHSGRVLAVT+GF
Sbjct: 146 LVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGF 295
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 186 bits (471), Expect = 6.830e-54 Identity = 86/151 (56.95%), Postives = 110/151 (72.85%), Query Frame = 1
Query: 4 ELIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
EL+ALVK++ WFP +D SGR+ IPV+LKVL+ L L RGN F D+ S +S A+FHRF + FA E Y +H+ LPTG+ Q KVM +YD LGF+GA GSTDVTH+ W CP++ AR ++GKEG+ T+AYQ TVDH+ RVLAVT GF
Sbjct: 129 ELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGF 279
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 171 bits (434), Expect = 8.260e-49 Identity = 84/152 (55.26%), Postives = 104/152 (68.42%), Query Frame = 1
Query: 7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQ--DKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
L+ALVK K WF V D G PVE KVL+ L LGRGN F + Q S MS +Q FH+F + FA E Y + +HLPT E D VM++YD LGFTGA+GS DVTH+ W+ CP++ AR ++GKEGF TIAYQ TVDH+GR +AVT+GF
Sbjct: 57 LVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGF 208
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI) HSP 1 Score: 163 bits (413), Expect = 5.470e-46 Identity = 81/152 (53.29%), Postives = 104/152 (68.42%), Query Frame = 1
Query: 7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGE--DQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
L+ALVK K WF D +GRQ PVE KVL+ L LGRGN F + Q S MS A +QA FH F K FA E Y +H++LP+ + + D VM++YD LGF+GA+GS DVTH+ W CP++ R ++GKEG TI YQ TV+H+GR AVT+GF
Sbjct: 97 LVALVKSKNWFATAGCDAAGRQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGF 248
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.520e-45 Identity = 78/152 (51.32%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGE--DQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
L+ALVK K WF D + RQ PVE KVL+ L LGRGN F + Q S MS +Q FH+F K FA E Y +H++LP+ + + D VM++YD LGF+GA+GS DVTH+ W+ CP++ AR ++GKEG T+ YQ TV+H+GR +AVT+GF
Sbjct: 70 LVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGF 221
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 162 bits (409), Expect = 5.620e-45 Identity = 78/152 (51.32%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGE--DQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
L+ LVK+K WF +D GR+C PVE KVL+ L LGRGN F + S MS +Q FH+F + FA E Y +H+ LP+ E + D+VM +Y+ LGF GA+GSTDVTH+ W+ CP++ R ++GKEG T+ YQ TV+H+GRVLAVT+GF
Sbjct: 99 LVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGF 250
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 157 bits (398), Expect = 4.140e-44 Identity = 79/151 (52.32%), Postives = 102/151 (67.55%), Query Frame = 1
Query: 4 ELIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
EL+ L + KRWF KD + R+ IP+ELKVL G+GN F+D+ Q S MSE++ QA FH+F + A E + +H++LPTG D+VM + LG TGA GSTDVTH+ CP + R F+GKEGF TIAY+ TVDH+GR LAVT GF
Sbjct: 109 ELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGF 253
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 158 bits (400), Expect = 4.600e-44 Identity = 75/138 (54.35%), Postives = 98/138 (71.01%), Query Frame = 1
Query: 46 RVKDVSGRQCIPV-ELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
+ D+S R C P +VL+ L L RGN F D+ S +S + ++FHRF K FA E Y ++V+LPTGED KVME+YD +GF GA+GSTDVTH+ W CP++ AR ++GKEG T+A+Q TVDHSGRVLAVT+GF
Sbjct: 67 KATDLSARCCFPPPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGF 204
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5L642_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L642_9PHAE) HSP 1 Score: 154 bits (388), Expect = 5.410e-44 Identity = 75/144 (52.08%), Postives = 100/144 (69.44%), Query Frame = 1
Query: 7 LIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGE--DQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGR 432
L+ALVK K WF D +GR PVE KVL+ L LGRGN F + Q S MS A +QA FH+F K FA E Y +H++LP+ + + D VM++YD LGF+GA+GS DVTH+ W+ CP++ AR ++GKEG T+ YQ TV+H+GR
Sbjct: 97 LVALVKSKNWFVTAGCDGAGRHSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGR 240
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 154 bits (390), Expect = 6.980e-44 Identity = 70/122 (57.38%), Postives = 92/122 (75.41%), Query Frame = 1
Query: 91 KVLSSLHFLGRGNFFEDMSQASHMSEAVIQASFHRFNKLFAEEFYHDHVHLPTGEDQDKVMEEYDHLGFTGAIGSTDVTHVKWACCPHSWARQFSGKEGFATIAYQATVDHSGRVLAVTKGF 456
+VL++L LGRGN F+D+ Q S MS+ + A+FH+F K FA+E + +H++LPTG QD+VM YD LG TGAIGSTDVTH+ W CP + R ++GKEGF TIAYQ TVDH+GR +A+T GF
Sbjct: 3 QVLTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGF 124 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1196.1713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1196.1713.1 >prot_H-canaliculatus_F_contig1196.1713.1 ID=prot_H-canaliculatus_F_contig1196.1713.1|Name=mRNA_H-canaliculatus_F_contig1196.1713.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=153bp TELIALVKEKRWFPMRVKDVSGRQCIPVELKVLSSLHFLGRGNFFEDMSQback to top mRNA from alignment at H-canaliculatus_F_contig1196:9683..11107- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1196.1713.1 ID=mRNA_H-canaliculatus_F_contig1196.1713.1|Name=mRNA_H-canaliculatus_F_contig1196.1713.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1425bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1196:9683..11107- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1196:9683..11107- >mRNA_H-canaliculatus_F_contig1196.1713.1 ID=mRNA_H-canaliculatus_F_contig1196.1713.1|Name=mRNA_H-canaliculatus_F_contig1196.1713.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=918bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1196:9683..11107- (Hapterophycus canaliculatus Oshoro5f female)back to top |